Wall clock time and date at job start Tue Mar 9 2021 14:34:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 H 1.08997 * 109.47557 * 2 1 4 4 C 1.53008 * 109.46883 * 119.99977 * 2 1 3 5 5 C 1.52993 * 109.46833 * 179.97438 * 4 2 1 6 6 C 1.52994 * 109.47566 * 299.99618 * 5 4 2 7 7 H 1.08995 * 109.47775 * 300.00425 * 6 5 4 8 8 N 1.46505 * 109.47326 * 179.97438 * 6 5 4 9 9 C 1.34780 * 119.99577 * 85.00277 * 8 6 5 10 10 O 1.21281 * 120.00134 * 0.02562 * 9 8 6 11 11 C 1.50702 * 119.99848 * 180.02562 * 9 8 6 12 12 C 1.50694 * 109.47185 * 180.02562 * 11 9 8 13 13 C 1.34852 * 125.88865 * 85.02130 * 12 11 9 14 14 C 1.40897 * 107.41383 * 179.97438 * 13 12 11 15 15 C 1.34849 * 107.41876 * 0.02562 * 14 13 12 16 16 C 1.50697 * 125.88861 * 179.97438 * 15 14 13 17 17 O 1.42905 * 109.46996 * 245.02375 * 16 15 14 18 18 Si 1.86301 * 109.47403 * 5.02638 * 16 15 14 19 19 N 1.36340 * 125.89065 * 265.30662 * 12 11 9 20 20 C 1.53008 * 109.46732 * 60.00320 * 6 5 4 21 21 C 1.52998 * 109.46883 * 299.99796 * 20 6 5 22 22 H 1.08997 * 109.47557 * 179.97438 * 1 2 3 23 23 H 1.08994 * 109.47429 * 300.00257 * 1 2 3 24 24 H 1.09007 * 109.46832 * 60.00148 * 1 2 3 25 25 H 1.08994 * 109.46897 * 300.00092 * 4 2 1 26 26 H 1.08997 * 109.47005 * 59.99685 * 4 2 1 27 27 H 1.09007 * 109.46782 * 179.97438 * 5 4 2 28 28 H 1.08997 * 109.47310 * 60.00205 * 5 4 2 29 29 H 0.97000 * 120.00185 * 265.00427 * 8 6 5 30 30 H 1.08998 * 109.47253 * 59.99774 * 11 9 8 31 31 H 1.09009 * 109.46939 * 300.00192 * 11 9 8 32 32 H 1.08000 * 126.29497 * 0.02562 * 13 12 11 33 33 H 1.07998 * 126.28781 * 179.97438 * 14 13 12 34 34 H 1.09001 * 109.46613 * 125.02786 * 16 15 14 35 35 H 0.96696 * 114.00036 * 60.00342 * 17 16 15 36 36 H 1.48497 * 109.99842 * 179.97438 * 18 16 15 37 37 H 1.48498 * 109.99736 * 301.31722 * 18 16 15 38 38 H 0.96992 * 125.63989 * 0.02577 * 19 12 11 39 39 H 1.08997 * 109.47005 * 60.00111 * 20 6 5 40 40 H 1.09008 * 109.46940 * 179.97438 * 20 6 5 41 41 H 1.09007 * 109.46832 * 180.02562 * 21 20 6 42 42 H 1.08995 * 109.47167 * 299.99615 * 21 20 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0276 0.0000 4 6 2.0399 -0.7213 1.2493 5 6 3.5699 -0.7218 1.2490 6 6 4.0794 -1.4435 -0.0001 7 1 3.7158 -2.4710 0.0000 8 7 5.5445 -1.4435 -0.0007 9 6 6.2186 -2.3994 0.6689 10 8 5.6124 -3.2599 1.2714 11 6 7.7256 -2.3991 0.6688 12 6 8.2282 -3.5631 1.4833 13 6 8.4026 -4.8236 1.0369 14 6 8.8853 -5.5901 2.1160 15 6 8.9870 -4.7689 3.1808 16 6 9.4627 -5.1605 4.5561 17 8 8.3890 -5.0216 5.4889 18 14 10.0400 -6.9316 4.5328 19 7 8.5799 -3.5247 2.8000 20 6 3.5695 -0.7222 -1.2494 21 6 2.0395 -0.7217 -1.2492 22 1 -0.3634 -1.0276 -0.0005 23 1 -0.3634 0.5138 0.8899 24 1 -0.3633 0.5139 -0.8901 25 1 1.6766 -0.2075 2.1392 26 1 1.6765 -1.7489 1.2493 27 1 3.9332 -1.2353 2.1393 28 1 3.9336 0.3056 1.2488 29 1 6.0293 -0.7555 -0.4829 30 1 8.0888 -1.4676 1.1030 31 1 8.0889 -2.4887 -0.3551 32 1 8.2087 -5.1799 0.0360 33 1 9.1284 -6.6421 2.0946 34 1 10.2879 -4.5132 4.8530 35 1 7.6188 -5.5701 5.2866 36 1 10.5122 -7.3297 5.8832 37 1 8.9328 -7.8210 4.0987 38 1 8.5480 -2.7412 3.3708 39 1 3.9332 0.3053 -1.2496 40 1 3.9329 -1.2361 -2.1395 41 1 1.6762 -0.2083 -2.1395 42 1 1.6758 -1.7492 -1.2490 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_4279154_14644196.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:34:55 Heat of formation + Delta-G solvation = -46.025181 kcal Electronic energy + Delta-G solvation = -21872.969646 eV Core-core repulsion = 18626.044024 eV Total energy + Delta-G solvation = -3246.925622 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 279.162 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -42.26960 -40.92199 -39.25348 -37.73245 -35.62652 -33.34105 -31.95629 -31.83873 -31.78915 -29.35641 -26.87087 -25.03700 -23.81322 -22.52830 -21.60903 -21.27305 -21.06808 -20.66848 -18.94743 -18.09706 -17.50887 -16.74025 -16.37490 -16.29265 -15.80001 -15.32738 -15.26927 -15.15340 -14.93955 -14.55346 -14.38995 -14.21099 -13.93825 -13.79000 -13.65653 -13.43756 -13.26939 -13.20233 -12.82682 -12.56744 -12.16117 -12.08122 -11.98010 -11.72576 -11.70937 -11.36577 -11.16320 -10.77560 -10.72608 -10.02597 -9.69084 -8.88257 -4.85896 1.16210 1.33862 1.67684 1.72986 1.92244 2.02024 2.32414 2.53528 3.42174 3.58142 3.64794 3.67393 3.80863 3.87237 3.99050 4.01906 4.04816 4.15179 4.34349 4.37127 4.42145 4.45711 4.46991 4.49874 4.62234 4.69617 4.73194 4.85484 4.86290 4.93526 4.99602 5.09840 5.11969 5.18829 5.26019 5.33224 5.34967 5.38420 5.46114 5.52726 6.07565 6.22517 6.43859 6.47636 6.68964 7.26571 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.094 4.094 3 H 0.070 0.930 4 C -0.113 4.113 5 C -0.128 4.128 6 C 0.146 3.854 7 H 0.088 0.912 8 N -0.731 5.731 9 C 0.511 3.489 10 O -0.523 6.523 11 C -0.073 4.073 12 C 0.038 3.962 13 C -0.174 4.174 14 C -0.187 4.187 15 C -0.009 4.009 16 C -0.056 4.056 17 O -0.537 6.537 18 Si 0.715 3.285 19 N -0.535 5.535 20 C -0.126 4.126 21 C -0.112 4.112 22 H 0.055 0.945 23 H 0.055 0.945 24 H 0.055 0.945 25 H 0.065 0.935 26 H 0.065 0.935 27 H 0.065 0.935 28 H 0.063 0.937 29 H 0.400 0.600 30 H 0.099 0.901 31 H 0.117 0.883 32 H 0.136 0.864 33 H 0.141 0.859 34 H 0.114 0.886 35 H 0.380 0.620 36 H -0.259 1.259 37 H -0.257 1.257 38 H 0.412 0.588 39 H 0.068 0.932 40 H 0.070 0.930 41 H 0.068 0.932 42 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.937 3.769 -4.117 5.908 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.113 4.113 3 H 0.089 0.911 4 C -0.151 4.151 5 C -0.167 4.167 6 C 0.041 3.959 7 H 0.106 0.894 8 N -0.382 5.382 9 C 0.296 3.704 10 O -0.398 6.398 11 C -0.113 4.113 12 C -0.076 4.076 13 C -0.198 4.198 14 C -0.212 4.212 15 C -0.122 4.122 16 C -0.165 4.165 17 O -0.344 6.344 18 Si 0.615 3.385 19 N -0.130 5.130 20 C -0.164 4.164 21 C -0.150 4.150 22 H 0.074 0.926 23 H 0.074 0.926 24 H 0.074 0.926 25 H 0.084 0.916 26 H 0.084 0.916 27 H 0.084 0.916 28 H 0.081 0.919 29 H 0.234 0.766 30 H 0.117 0.883 31 H 0.135 0.865 32 H 0.154 0.846 33 H 0.159 0.841 34 H 0.131 0.869 35 H 0.228 0.772 36 H -0.184 1.184 37 H -0.181 1.181 38 H 0.248 0.752 39 H 0.087 0.913 40 H 0.088 0.912 41 H 0.087 0.913 42 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges 1.787 2.859 -2.977 4.498 hybrid contribution -1.010 1.070 0.230 1.489 sum 0.777 3.929 -2.746 4.856 Atomic orbital electron populations 1.21837 0.94975 1.02023 1.01844 1.21181 0.95746 0.99614 0.94722 0.91130 1.21563 0.94588 1.01121 0.97799 1.21905 0.96035 1.00602 0.98150 1.21001 0.78908 1.00961 0.94982 0.89405 1.46110 1.07320 1.30788 1.54026 1.20608 0.89806 0.81184 0.78764 1.90765 1.70071 1.36693 1.42244 1.20149 0.92210 0.97071 1.01918 1.19486 1.07396 0.96325 0.84392 1.20588 1.07429 0.91997 0.99810 1.20671 1.08331 0.99287 0.92869 1.20773 1.09009 0.85507 0.96906 1.24776 0.92582 1.14440 0.84697 1.86564 1.27952 1.68679 1.51168 0.94405 0.87661 0.72513 0.83936 1.41795 1.51528 1.10291 1.09403 1.21810 0.96682 1.00856 0.97065 1.21551 0.94082 1.01305 0.98024 0.92565 0.92585 0.92572 0.91610 0.91644 0.91585 0.91857 0.76632 0.88272 0.86472 0.84604 0.84148 0.86862 0.77223 1.18361 1.18149 0.75158 0.91338 0.91170 0.91291 0.91540 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.14 9.19 37.16 0.34 0.48 16 2 C -0.09 0.10 2.72 -90.62 -0.25 -0.15 16 3 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 4 C -0.11 0.02 5.20 -26.73 -0.14 -0.12 16 5 C -0.13 -0.03 5.49 -26.74 -0.15 -0.17 16 6 C 0.15 -0.03 2.45 -67.93 -0.17 -0.20 16 7 H 0.09 0.20 7.58 -51.93 -0.39 -0.20 16 8 N -0.73 0.90 5.08 -53.80 -0.27 0.63 16 9 C 0.51 0.62 7.79 -10.98 -0.09 0.54 16 10 O -0.52 -3.15 15.70 5.56 0.09 -3.07 16 11 C -0.07 0.11 6.24 -29.04 -0.18 -0.08 16 12 C 0.04 0.06 5.66 -81.79 -0.46 -0.40 16 13 C -0.17 -0.45 10.77 -39.78 -0.43 -0.88 16 14 C -0.19 -0.43 9.37 -39.78 -0.37 -0.80 16 15 C -0.01 -0.02 6.50 -81.79 -0.53 -0.55 16 16 C -0.06 -0.04 3.08 36.00 0.11 0.07 16 17 O -0.54 -1.34 12.88 -35.23 -0.45 -1.80 16 18 Si 0.72 -0.12 30.60 -169.99 -5.20 -5.32 16 19 N -0.54 -0.79 6.07 -5.44 -0.03 -0.83 16 20 C -0.13 0.24 5.39 -26.73 -0.14 0.10 16 21 C -0.11 0.16 5.20 -26.73 -0.14 0.02 16 22 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 23 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 24 H 0.06 -0.07 8.14 -51.92 -0.42 -0.49 16 25 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 26 H 0.06 0.04 8.14 -51.93 -0.42 -0.38 16 27 H 0.07 0.16 8.14 -51.92 -0.42 -0.27 16 28 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 29 H 0.40 -1.66 8.60 -40.82 -0.35 -2.01 16 30 H 0.10 -0.37 8.14 -51.93 -0.42 -0.79 16 31 H 0.12 -0.43 8.14 -51.92 -0.42 -0.85 16 32 H 0.14 0.20 8.06 -52.49 -0.42 -0.23 16 33 H 0.14 0.10 6.24 -52.49 -0.33 -0.22 16 34 H 0.11 -0.04 7.96 -51.93 -0.41 -0.45 16 35 H 0.38 0.18 8.70 45.56 0.40 0.57 16 36 H -0.26 -0.71 7.11 56.52 0.40 -0.30 16 37 H -0.26 -0.57 7.11 56.52 0.40 -0.17 16 38 H 0.41 -0.05 8.96 -40.82 -0.37 -0.42 16 39 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 40 H 0.07 -0.14 8.14 -51.92 -0.42 -0.57 16 41 H 0.07 -0.12 8.14 -51.92 -0.42 -0.55 16 42 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 LS Contribution 339.69 15.07 5.12 5.12 Total: 0.00 -7.78 339.69 -10.34 -18.12 By element: Atomic # 1 Polarization: -3.72 SS G_CDS: -6.99 Total: -10.71 kcal Atomic # 6 Polarization: 0.45 SS G_CDS: -2.59 Total: -2.14 kcal Atomic # 7 Polarization: 0.11 SS G_CDS: -0.31 Total: -0.20 kcal Atomic # 8 Polarization: -4.50 SS G_CDS: -0.37 Total: -4.86 kcal Atomic # 14 Polarization: -0.12 SS G_CDS: -5.20 Total: -5.32 kcal Total LS contribution 5.12 Total: 5.12 kcal Total: -7.78 -10.34 -18.12 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_4279154_14644196.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -27.908 kcal (2) G-P(sol) polarization free energy of solvation -7.775 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -35.683 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.342 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.117 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.025 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds