Wall clock time and date at job start Tue Mar 9 2021 14:35:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42909 * 1 3 3 C 1.35981 * 117.00011 * 2 1 4 4 C 1.38676 * 119.99859 * 180.02562 * 3 2 1 5 5 C 1.38152 * 119.99754 * 180.02562 * 4 3 2 6 6 C 1.50702 * 119.99818 * 180.02562 * 5 4 3 7 7 O 1.42899 * 109.47249 * 104.97435 * 6 5 4 8 8 Si 1.86305 * 109.47107 * 344.97332 * 6 5 4 9 9 C 1.38674 * 120.00484 * 359.97438 * 5 4 3 10 10 O 1.35978 * 120.00601 * 180.02562 * 9 5 4 11 11 C 1.42895 * 117.00416 * 180.02562 * 10 9 5 12 12 C 1.50703 * 109.47270 * 180.02562 * 11 10 9 13 13 O 1.21279 * 120.00024 * 0.02562 * 12 11 10 14 14 N 1.34778 * 119.99935 * 179.97438 * 12 11 10 15 15 C 1.46499 * 119.99771 * 179.97438 * 14 12 11 16 16 H 1.08992 * 109.47397 * 325.00275 * 15 14 12 17 17 C 1.53002 * 109.46799 * 85.00174 * 15 14 12 18 18 C 1.52997 * 109.46817 * 179.97438 * 17 15 14 19 19 C 1.53005 * 109.47452 * 300.00239 * 18 17 15 20 20 H 1.09002 * 109.46935 * 300.00125 * 19 18 17 21 21 C 1.53002 * 109.47197 * 180.02562 * 19 18 17 22 22 C 1.52999 * 109.47159 * 59.99536 * 19 18 17 23 23 C 1.52997 * 109.47317 * 300.00546 * 22 19 18 24 24 C 1.38725 * 119.99574 * 0.27899 * 9 5 4 25 25 C 1.38111 * 119.99791 * 359.44391 * 24 9 5 26 26 H 1.08998 * 109.46883 * 180.02562 * 1 2 3 27 27 H 1.09002 * 109.46889 * 299.99821 * 1 2 3 28 28 H 1.09001 * 109.46741 * 59.99665 * 1 2 3 29 29 H 1.08003 * 119.99929 * 359.97438 * 4 3 2 30 30 H 1.09001 * 109.47188 * 224.97573 * 6 5 4 31 31 H 0.96701 * 113.99607 * 60.00338 * 7 6 5 32 32 H 1.48500 * 109.99974 * 178.67985 * 8 6 5 33 33 H 1.48497 * 110.00083 * 300.00292 * 8 6 5 34 34 H 1.08995 * 109.47296 * 60.00058 * 11 10 9 35 35 H 1.08999 * 109.47100 * 300.00182 * 11 10 9 36 36 H 0.97006 * 119.99662 * 0.02562 * 14 12 11 37 37 H 1.08993 * 109.47662 * 299.99952 * 17 15 14 38 38 H 1.09002 * 109.47075 * 60.00457 * 17 15 14 39 39 H 1.09002 * 109.47153 * 60.00231 * 18 17 15 40 40 H 1.09001 * 109.47289 * 180.02562 * 18 17 15 41 41 H 1.09001 * 109.47142 * 59.99766 * 21 19 18 42 42 H 1.08996 * 109.46698 * 179.97438 * 21 19 18 43 43 H 1.09002 * 109.46838 * 299.99316 * 21 19 18 44 44 H 1.08996 * 109.46929 * 179.97438 * 22 19 18 45 45 H 1.09002 * 109.46716 * 60.00455 * 22 19 18 46 46 H 1.09002 * 109.47153 * 299.99641 * 23 22 19 47 47 H 1.09001 * 109.46832 * 179.97438 * 23 22 19 48 48 H 1.07999 * 119.99968 * 179.70497 * 24 9 5 49 49 H 1.07998 * 119.99859 * 180.30167 * 25 24 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4313 1.2841 -0.0005 5 6 4.0585 2.5151 0.0000 6 6 5.5634 2.5939 -0.0012 7 8 6.0199 2.9676 -1.3027 8 14 6.2727 0.9319 0.4522 9 6 3.3033 3.6782 0.0005 10 8 3.9206 4.8898 0.0005 11 6 3.0807 6.0458 0.0017 12 6 3.9349 7.2874 0.0009 13 8 5.1439 7.1916 -0.0010 14 7 3.3553 8.5042 0.0012 15 6 4.1857 9.7110 0.0010 16 1 5.0854 9.5332 0.5899 17 6 4.5778 10.0600 -1.4362 18 6 5.4445 11.3208 -1.4365 19 6 4.6563 12.4818 -0.8266 20 1 3.7566 12.6593 -1.4157 21 6 5.5229 13.7427 -0.8275 22 6 4.2642 12.1327 0.6105 23 6 3.3975 10.8719 0.6108 24 6 1.9179 3.6056 0.0064 25 6 1.2910 2.3750 0.0001 26 1 -0.3633 -1.0277 0.0005 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5139 -0.8900 29 1 4.0195 0.3783 -0.0005 30 1 5.8888 3.3383 0.7256 31 1 5.6890 3.8247 -1.6044 32 1 7.7564 0.9880 0.4236 33 1 5.8055 0.5319 1.8038 34 1 2.4522 6.0375 0.8921 35 1 2.4507 6.0381 -0.8878 36 1 2.3883 8.5807 0.0023 37 1 5.1389 9.2329 -1.8709 38 1 3.6780 10.2380 -2.0252 39 1 6.3443 11.1433 -0.8474 40 1 5.7235 11.5697 -2.4604 41 1 5.8019 13.9912 -1.8515 42 1 4.9612 14.5698 -0.3934 43 1 6.4228 13.5655 -0.2385 44 1 3.7032 12.9600 1.0451 45 1 5.1640 11.9552 1.1996 46 1 2.4977 11.0494 0.0217 47 1 3.1185 10.6231 1.6347 48 1 1.3298 4.5113 0.0116 49 1 0.2124 2.3185 -0.0003 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_4279154_4974302.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:35:46 Heat of formation + Delta-G solvation = -128.989811 kcal Electronic energy + Delta-G solvation = -29283.111598 eV Core-core repulsion = 25176.886128 eV Total energy + Delta-G solvation = -4106.225471 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.182 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -41.84262 -41.12532 -40.09244 -39.23463 -37.96756 -36.82823 -35.74825 -32.82539 -32.51105 -31.87344 -30.97569 -29.46302 -28.10097 -26.70589 -26.48249 -23.90795 -23.76061 -22.41757 -22.33135 -21.59924 -20.81312 -19.52673 -18.80593 -18.55446 -17.88264 -17.53178 -17.36841 -17.23143 -16.69219 -16.09547 -16.01418 -15.76346 -15.41192 -15.35508 -15.30295 -15.19491 -15.11809 -14.42950 -14.32683 -14.11612 -13.95077 -13.74707 -13.61459 -13.46023 -13.31209 -13.24526 -13.07238 -12.71566 -12.58692 -12.24968 -12.20071 -12.03493 -11.86067 -11.76300 -11.51425 -11.40983 -11.21632 -11.13586 -10.98011 -10.84019 -10.17122 -10.06484 -8.81378 -4.73612 0.08175 0.35586 1.38938 1.45288 1.54573 1.79730 2.15249 2.26199 2.50537 2.56959 3.37314 3.54028 3.57073 3.60080 3.65980 3.74265 3.81644 3.83431 3.96685 3.97607 4.08623 4.09165 4.12274 4.13412 4.17752 4.29456 4.34451 4.35975 4.41120 4.44357 4.45665 4.53787 4.65268 4.66864 4.68469 4.83557 4.89212 4.93946 5.03506 5.05273 5.08240 5.11585 5.15187 5.19152 5.22460 5.29654 5.36888 5.41365 5.45521 6.07884 6.30676 6.39343 6.75190 7.05954 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.314 6.314 3 C 0.103 3.897 4 C -0.103 4.103 5 C -0.099 4.099 6 C -0.072 4.072 7 O -0.533 6.533 8 Si 0.743 3.257 9 C 0.100 3.900 10 O -0.290 6.290 11 C 0.041 3.959 12 C 0.516 3.484 13 O -0.511 6.511 14 N -0.725 5.725 15 C 0.147 3.853 16 H 0.090 0.910 17 C -0.130 4.130 18 C -0.113 4.113 19 C -0.095 4.095 20 H 0.071 0.929 21 C -0.150 4.150 22 C -0.112 4.112 23 C -0.126 4.126 24 C -0.165 4.165 25 C -0.165 4.165 26 H 0.103 0.897 27 H 0.055 0.945 28 H 0.056 0.944 29 H 0.146 0.854 30 H 0.078 0.922 31 H 0.368 0.632 32 H -0.254 1.254 33 H -0.251 1.251 34 H 0.093 0.907 35 H 0.094 0.906 36 H 0.401 0.599 37 H 0.068 0.932 38 H 0.064 0.936 39 H 0.066 0.934 40 H 0.067 0.933 41 H 0.056 0.944 42 H 0.055 0.945 43 H 0.055 0.945 44 H 0.069 0.931 45 H 0.066 0.934 46 H 0.069 0.931 47 H 0.070 0.930 48 H 0.133 0.867 49 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.833 2.545 -0.260 8.240 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.227 6.227 3 C 0.058 3.942 4 C -0.121 4.121 5 C -0.100 4.100 6 C -0.180 4.180 7 O -0.339 6.339 8 Si 0.642 3.358 9 C 0.055 3.945 10 O -0.203 6.203 11 C -0.038 4.038 12 C 0.300 3.700 13 O -0.385 6.385 14 N -0.378 5.378 15 C 0.043 3.957 16 H 0.108 0.892 17 C -0.168 4.168 18 C -0.151 4.151 19 C -0.113 4.113 20 H 0.089 0.911 21 C -0.207 4.207 22 C -0.150 4.150 23 C -0.164 4.164 24 C -0.184 4.184 25 C -0.184 4.184 26 H 0.121 0.879 27 H 0.074 0.926 28 H 0.075 0.925 29 H 0.164 0.836 30 H 0.096 0.904 31 H 0.216 0.784 32 H -0.179 1.179 33 H -0.175 1.175 34 H 0.111 0.889 35 H 0.112 0.888 36 H 0.235 0.765 37 H 0.087 0.913 38 H 0.083 0.917 39 H 0.084 0.916 40 H 0.086 0.914 41 H 0.075 0.925 42 H 0.074 0.926 43 H 0.075 0.925 44 H 0.088 0.912 45 H 0.085 0.915 46 H 0.088 0.912 47 H 0.088 0.912 48 H 0.151 0.849 49 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -5.838 1.303 0.349 5.992 hybrid contribution -1.612 2.068 0.328 2.643 sum -7.451 3.371 0.676 8.206 Atomic orbital electron populations 1.23103 0.78072 1.04391 1.01315 1.86116 1.21536 1.26175 1.88889 1.18809 0.91909 0.84570 0.98907 1.20058 0.91636 0.96767 1.03613 1.19483 0.96619 0.90034 1.03840 1.25373 0.91498 1.12365 0.88811 1.86705 1.73824 1.41897 1.31442 0.93028 0.79762 0.80243 0.82796 1.18663 0.90827 0.84613 1.00440 1.86111 1.33903 1.11071 1.89241 1.22462 0.93207 0.84179 1.03952 1.20019 0.88849 0.84204 0.76893 1.90788 1.14101 1.86514 1.47057 1.45929 1.10506 1.05160 1.76202 1.21063 0.94561 0.82817 0.97225 0.89181 1.21924 1.00373 0.98387 0.96138 1.21568 0.98429 0.93681 1.01397 1.21188 0.98860 0.95064 0.96193 0.91095 1.21836 0.99861 0.97002 1.01986 1.21550 0.99881 0.96628 0.96899 1.21813 0.98913 0.94428 1.01266 1.21021 0.92833 0.98690 1.05872 1.21081 1.00321 0.91508 1.05469 0.87863 0.92634 0.92538 0.83636 0.90420 0.78382 1.17895 1.17527 0.88945 0.88810 0.76489 0.91280 0.91696 0.91567 0.91449 0.92533 0.92579 0.92547 0.91225 0.91492 0.91213 0.91164 0.84928 0.84705 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.31 -0.43 10.50 -19.68 -0.21 -0.64 16 3 C 0.10 0.17 6.69 -39.24 -0.26 -0.09 16 4 C -0.10 -0.21 8.59 -39.45 -0.34 -0.55 16 5 C -0.10 -0.27 5.27 -104.49 -0.55 -0.82 16 6 C -0.07 -0.24 2.33 36.01 0.08 -0.15 16 7 O -0.53 -2.21 12.65 -35.23 -0.45 -2.65 16 8 Si 0.74 1.47 30.17 -169.99 -5.13 -3.66 16 9 C 0.10 0.20 6.62 -39.24 -0.26 -0.06 16 10 O -0.29 -0.68 8.56 -39.58 -0.34 -1.01 16 11 C 0.04 -0.05 5.22 36.01 0.19 0.14 16 12 C 0.52 0.56 7.87 -10.98 -0.09 0.47 16 13 O -0.51 -3.03 16.16 -14.35 -0.23 -3.26 16 14 N -0.72 1.28 5.08 -53.81 -0.27 1.01 16 15 C 0.15 -0.11 2.45 -67.93 -0.17 -0.28 16 16 H 0.09 0.14 7.58 -51.93 -0.39 -0.25 16 17 C -0.13 0.05 5.49 -26.73 -0.15 -0.09 16 18 C -0.11 0.08 5.20 -26.73 -0.14 -0.06 16 19 C -0.09 0.14 2.72 -90.62 -0.25 -0.11 16 20 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 21 C -0.15 0.19 9.20 37.16 0.34 0.53 16 22 C -0.11 0.21 5.21 -26.73 -0.14 0.07 16 23 C -0.13 0.31 5.39 -26.73 -0.14 0.17 16 24 C -0.17 0.01 9.03 -39.45 -0.36 -0.35 16 25 C -0.16 -0.02 9.03 -39.45 -0.36 -0.37 16 26 H 0.10 -0.37 8.14 -51.93 -0.42 -0.79 16 27 H 0.06 -0.17 7.66 -51.93 -0.40 -0.57 16 28 H 0.06 -0.17 7.66 -51.93 -0.40 -0.57 16 29 H 0.15 0.06 5.13 -52.48 -0.27 -0.21 16 30 H 0.08 0.32 7.82 -51.93 -0.41 -0.09 16 31 H 0.37 1.03 8.59 45.56 0.39 1.42 16 32 H -0.25 -1.19 7.11 56.52 0.40 -0.79 16 33 H -0.25 -0.78 7.11 56.52 0.40 -0.38 16 34 H 0.09 -0.32 7.65 -51.93 -0.40 -0.72 16 35 H 0.09 -0.35 7.67 -51.93 -0.40 -0.75 16 36 H 0.40 -1.97 8.60 -40.82 -0.35 -2.32 16 37 H 0.07 0.12 8.14 -51.93 -0.42 -0.31 16 38 H 0.06 -0.07 8.14 -51.93 -0.42 -0.50 16 39 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 40 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 41 H 0.06 -0.07 8.14 -51.93 -0.42 -0.49 16 42 H 0.06 -0.08 8.14 -51.93 -0.42 -0.50 16 43 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 44 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 45 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 46 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 47 H 0.07 -0.18 8.14 -51.93 -0.42 -0.61 16 48 H 0.13 -0.39 6.29 -52.49 -0.33 -0.72 16 49 H 0.14 -0.30 6.29 -52.49 -0.33 -0.63 16 LS Contribution 390.26 15.07 5.88 5.88 Total: 0.00 -8.04 390.26 -10.31 -18.35 By element: Atomic # 1 Polarization: -5.42 SS G_CDS: -7.97 Total: -13.39 kcal Atomic # 6 Polarization: 0.97 SS G_CDS: -1.59 Total: -0.62 kcal Atomic # 7 Polarization: 1.28 SS G_CDS: -0.27 Total: 1.01 kcal Atomic # 8 Polarization: -6.34 SS G_CDS: -1.22 Total: -7.57 kcal Atomic # 14 Polarization: 1.47 SS G_CDS: -5.13 Total: -3.66 kcal Total LS contribution 5.88 Total: 5.88 kcal Total: -8.04 -10.31 -18.35 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_4279154_4974302.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -110.640 kcal (2) G-P(sol) polarization free energy of solvation -8.044 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -118.684 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.306 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.350 kcal (6) G-S(sol) free energy of system = (1) + (5) -128.990 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds