Wall clock time and date at job start Tue Mar 9 2021 14:35:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 H 1.09002 * 109.47070 * 2 1 4 4 C 1.52997 * 109.46817 * 119.99820 * 2 1 3 5 5 C 1.52999 * 109.47317 * 179.97438 * 4 2 1 6 6 C 1.53005 * 109.47159 * 300.00546 * 5 4 2 7 7 H 1.09002 * 109.46935 * 299.99411 * 6 5 4 8 8 N 1.46500 * 109.47094 * 179.97438 * 6 5 4 9 9 C 1.34772 * 120.00198 * 154.99525 * 8 6 5 10 10 O 1.21292 * 119.99872 * 0.02562 * 9 8 6 11 11 C 1.50699 * 120.00302 * 180.02562 * 9 8 6 12 12 O 1.42907 * 109.47064 * 180.02562 * 11 9 8 13 13 C 1.35918 * 116.99733 * 180.02562 * 12 11 9 14 14 C 1.38786 * 120.05527 * 179.97438 * 13 12 11 15 15 Br 1.89098 * 120.03988 * 359.97438 * 14 13 12 16 16 C 1.38246 * 119.92671 * 179.97438 * 14 13 12 17 17 C 1.38245 * 120.04521 * 359.97438 * 16 14 13 18 18 C 1.50691 * 119.93904 * 180.02562 * 17 16 14 19 19 O 1.42906 * 109.47437 * 64.99973 * 18 17 16 20 20 Si 1.86306 * 109.47110 * 184.99632 * 18 17 16 21 21 C 1.38282 * 120.11327 * 0.03405 * 17 16 14 22 22 C 1.38139 * 120.07700 * 359.68501 * 21 17 16 23 23 C 1.52997 * 109.47452 * 59.99536 * 6 5 4 24 24 C 1.53000 * 109.47233 * 239.99626 * 2 1 3 25 25 H 1.08996 * 109.47407 * 300.00400 * 1 2 3 26 26 H 1.09000 * 109.46986 * 60.00171 * 1 2 3 27 27 H 1.09002 * 109.47075 * 179.97438 * 1 2 3 28 28 H 1.08996 * 109.47853 * 300.00202 * 4 2 1 29 29 H 1.09002 * 109.47153 * 60.00231 * 4 2 1 30 30 H 1.09002 * 109.46716 * 60.00091 * 5 4 2 31 31 H 1.09000 * 109.47486 * 180.02562 * 5 4 2 32 32 H 0.97002 * 120.00110 * 335.00521 * 8 6 5 33 33 H 1.08999 * 109.47104 * 300.00012 * 11 9 8 34 34 H 1.08999 * 109.47169 * 60.00361 * 11 9 8 35 35 H 1.08001 * 119.97609 * 179.97438 * 16 14 13 36 36 H 1.08998 * 109.47637 * 304.99276 * 18 17 16 37 37 H 0.96702 * 113.99575 * 59.99559 * 19 18 17 38 38 H 1.48498 * 110.00155 * 179.97438 * 20 18 17 39 39 H 1.48501 * 109.99866 * 301.32176 * 20 18 17 40 40 H 1.08003 * 119.95975 * 179.97438 * 21 17 16 41 41 H 1.08001 * 120.02376 * 180.31724 * 22 21 17 42 42 H 1.09002 * 109.46695 * 59.99734 * 23 6 5 43 43 H 1.08993 * 109.47194 * 179.97438 * 23 6 5 44 44 H 1.08992 * 109.47399 * 300.00166 * 24 2 1 45 45 H 1.09004 * 109.46724 * 60.00652 * 24 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0277 0.0000 4 6 2.0399 -0.7212 1.2493 5 6 3.5699 -0.7218 1.2491 6 6 4.0795 -1.4434 -0.0002 7 1 3.7158 -2.4710 0.0000 8 7 5.5445 -1.4435 -0.0007 9 6 6.2181 -2.3998 -0.6701 10 8 5.6114 -3.2601 -1.2725 11 6 7.7251 -2.4002 -0.6701 12 8 8.2011 -3.5037 -1.4433 13 6 9.5486 -3.6502 -1.5451 14 6 10.0800 -4.7005 -2.2803 15 35 8.9303 -5.9304 -3.1414 16 6 11.4509 -4.8467 -2.3825 17 6 12.2917 -3.9474 -1.7535 18 6 13.7856 -4.1087 -1.8670 19 8 14.1831 -3.9221 -3.2269 20 14 14.6303 -2.8415 -0.7938 21 6 11.7641 -2.9004 -1.0204 22 6 10.3950 -2.7463 -0.9199 23 6 3.5696 -0.7222 -1.2495 24 6 2.0401 -0.7213 -1.2492 25 1 -0.3634 0.5139 0.8899 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3633 -1.0277 -0.0005 28 1 1.6766 -0.2075 2.1393 29 1 1.6766 -1.7489 1.2493 30 1 3.9336 0.3057 1.2488 31 1 3.9332 -1.2360 2.1388 32 1 6.0297 -0.7553 0.4809 33 1 8.0887 -1.4690 -1.1045 34 1 8.0885 -2.4898 0.3536 35 1 11.8653 -5.6640 -2.9541 36 1 14.0691 -5.1089 -1.5396 37 1 13.9619 -3.0516 -3.5854 38 1 16.1042 -2.9903 -0.8964 39 1 14.2272 -1.4740 -1.2096 40 1 12.4232 -2.1995 -0.5297 41 1 9.9839 -1.9253 -0.3513 42 1 3.9333 0.3053 -1.2496 43 1 3.9330 -1.2360 -2.1394 44 1 1.6768 -1.7489 -1.2492 45 1 1.6768 -0.2074 -2.1392 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_4279154_6201210.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:35:56 Heat of formation + Delta-G solvation = -83.276571 kcal Electronic energy + Delta-G solvation = -26670.593166 eV Core-core repulsion = 22700.751778 eV Total energy + Delta-G solvation = -3969.841388 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.077 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -41.72181 -40.95798 -39.59833 -38.90021 -37.33820 -35.74582 -33.63278 -32.50193 -31.88938 -31.76682 -30.49773 -29.53043 -26.82214 -26.18104 -24.05086 -23.74818 -22.55184 -22.18282 -21.60252 -20.72262 -19.59244 -18.61721 -18.19856 -17.50727 -17.28167 -17.10484 -16.40370 -16.20888 -15.91744 -15.70481 -15.51720 -15.20906 -15.20214 -15.03706 -14.72021 -14.49454 -14.29689 -13.85713 -13.80665 -13.65608 -13.59072 -13.22857 -13.14979 -12.55136 -12.41531 -12.21599 -12.19637 -12.09841 -11.93155 -11.89782 -11.72611 -11.64767 -11.30318 -11.24507 -11.13931 -10.89896 -10.60186 -10.13650 -9.97614 -9.33992 -4.88929 -0.06094 0.11311 0.63486 1.33486 1.42012 1.46576 1.61951 2.01298 2.38383 2.51094 3.40733 3.46886 3.60181 3.66085 3.72142 3.75188 3.80706 3.93383 4.02205 4.07049 4.09765 4.11284 4.19051 4.32117 4.40328 4.43783 4.53399 4.56867 4.58068 4.64363 4.76060 4.79849 4.84803 4.94967 4.99814 4.99890 5.09370 5.13222 5.18372 5.22915 5.23035 5.33395 5.40125 5.44516 5.48977 5.56150 6.06111 6.47637 6.50504 7.16126 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.090 4.090 3 H 0.080 0.920 4 C -0.112 4.112 5 C -0.117 4.117 6 C 0.148 3.852 7 H 0.059 0.941 8 N -0.706 5.706 9 C 0.510 3.490 10 O -0.570 6.570 11 C 0.033 3.967 12 O -0.306 6.306 13 C 0.149 3.851 14 C -0.145 4.145 15 Br -0.056 7.056 16 C -0.035 4.035 17 C -0.149 4.149 18 C -0.085 4.085 19 O -0.551 6.551 20 Si 0.779 3.221 21 C -0.055 4.055 22 C -0.189 4.189 23 C -0.124 4.124 24 C -0.112 4.112 25 H 0.061 0.939 26 H 0.053 0.947 27 H 0.049 0.951 28 H 0.080 0.920 29 H 0.055 0.945 30 H 0.089 0.911 31 H 0.078 0.922 32 H 0.421 0.579 33 H 0.130 0.870 34 H 0.134 0.866 35 H 0.136 0.864 36 H 0.122 0.878 37 H 0.387 0.613 38 H -0.308 1.308 39 H -0.269 1.269 40 H 0.165 0.835 41 H 0.180 0.820 42 H 0.079 0.921 43 H 0.040 0.960 44 H 0.050 0.950 45 H 0.065 0.935 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.322 8.652 8.168 11.971 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.108 4.108 3 H 0.098 0.902 4 C -0.151 4.151 5 C -0.154 4.154 6 C 0.044 3.956 7 H 0.078 0.922 8 N -0.360 5.360 9 C 0.296 3.704 10 O -0.448 6.448 11 C -0.044 4.044 12 O -0.219 6.219 13 C 0.101 3.899 14 C -0.225 4.225 15 Br 0.029 6.971 16 C -0.055 4.055 17 C -0.150 4.150 18 C -0.193 4.193 19 O -0.359 6.359 20 Si 0.683 3.317 21 C -0.073 4.073 22 C -0.208 4.208 23 C -0.163 4.163 24 C -0.151 4.151 25 H 0.080 0.920 26 H 0.073 0.927 27 H 0.068 0.932 28 H 0.098 0.902 29 H 0.074 0.926 30 H 0.107 0.893 31 H 0.096 0.904 32 H 0.259 0.741 33 H 0.148 0.852 34 H 0.152 0.848 35 H 0.154 0.846 36 H 0.140 0.860 37 H 0.236 0.764 38 H -0.237 1.237 39 H -0.196 1.196 40 H 0.182 0.818 41 H 0.197 0.803 42 H 0.098 0.902 43 H 0.059 0.941 44 H 0.069 0.931 45 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges 1.024 7.518 7.435 10.623 hybrid contribution 0.094 0.356 -1.282 1.334 sum 1.118 7.874 6.153 10.055 Atomic orbital electron populations 1.21843 0.95175 1.01684 1.02065 1.21155 0.95580 0.99883 0.94221 0.90194 1.21562 0.94506 1.00787 0.98195 1.21759 0.96168 1.01688 0.95831 1.20971 0.78683 0.99822 0.96168 0.92227 1.45763 1.07209 1.30118 1.52909 1.20567 0.89886 0.81314 0.78624 1.90791 1.70959 1.38867 1.44179 1.22865 0.91107 0.90964 0.99495 1.86254 1.18591 1.48438 1.68568 1.18824 0.82893 0.93726 0.94488 1.21287 0.94436 0.99104 1.07694 1.96761 1.64704 1.57525 1.78065 1.20894 0.89360 0.98729 0.96470 1.20286 0.96338 0.97074 1.01345 1.25329 0.92690 1.12104 0.89173 1.86598 1.82970 1.40018 1.26327 0.94072 0.75963 0.74831 0.86853 1.21294 0.95120 0.95890 0.95007 1.21560 0.93490 1.01304 1.04445 1.21849 0.96228 1.01094 0.97141 1.21543 0.94422 1.00510 0.98584 0.91957 0.92744 0.93230 0.90166 0.92640 0.89263 0.90371 0.74072 0.85248 0.84841 0.84578 0.86013 0.76406 1.23700 1.19552 0.81820 0.80311 0.90189 0.94115 0.93079 0.91655 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.38 9.19 71.98 0.66 1.04 16 2 C -0.09 0.30 2.72 -10.79 -0.03 0.27 16 3 H 0.08 -0.38 8.14 -2.39 -0.02 -0.40 16 4 C -0.11 0.51 5.20 30.59 0.16 0.67 16 5 C -0.12 0.77 5.39 30.60 0.16 0.94 16 6 C 0.15 -0.21 2.45 44.99 0.11 -0.10 16 7 H 0.06 0.31 7.58 -2.39 -0.02 0.30 16 8 N -0.71 3.37 5.08 -442.52 -2.25 1.12 16 9 C 0.51 1.12 7.87 87.66 0.69 1.81 16 10 O -0.57 -8.41 16.16 15.97 0.26 -8.16 16 11 C 0.03 -0.16 5.22 71.24 0.37 0.21 16 12 O -0.31 -1.53 9.01 -73.59 -0.66 -2.19 16 13 C 0.15 0.35 6.68 22.52 0.15 0.50 16 14 C -0.15 -0.85 6.24 22.40 0.14 -0.71 16 15 Br -0.06 -0.56 33.16 -20.37 -0.68 -1.24 16 16 C -0.03 -0.10 9.42 22.27 0.21 0.11 16 17 C -0.15 0.28 5.35 -19.85 -0.11 0.17 16 18 C -0.09 0.22 2.80 71.23 0.20 0.42 16 19 O -0.55 -0.78 12.83 -148.98 -1.91 -2.69 16 20 Si 0.78 -4.41 29.88 68.60 2.05 -2.36 16 21 C -0.06 0.33 8.66 22.26 0.19 0.53 16 22 C -0.19 1.06 9.04 22.36 0.20 1.26 16 23 C -0.12 0.01 5.49 30.58 0.17 0.18 16 24 C -0.11 0.03 5.20 30.58 0.16 0.19 16 25 H 0.06 -0.22 8.14 -2.39 -0.02 -0.24 16 26 H 0.05 -0.12 8.14 -2.39 -0.02 -0.14 16 27 H 0.05 -0.06 8.14 -2.39 -0.02 -0.08 16 28 H 0.08 -0.49 8.14 -2.39 -0.02 -0.51 16 29 H 0.05 -0.11 8.14 -2.39 -0.02 -0.13 16 30 H 0.09 -0.89 8.14 -2.39 -0.02 -0.91 16 31 H 0.08 -0.58 8.14 -2.39 -0.02 -0.60 16 32 H 0.42 -5.53 8.60 -92.71 -0.80 -6.33 16 33 H 0.13 -1.53 7.65 -2.39 -0.02 -1.55 16 34 H 0.13 -1.66 7.68 -2.39 -0.02 -1.67 16 35 H 0.14 0.45 8.06 -2.91 -0.02 0.42 16 36 H 0.12 -0.42 7.96 -2.39 -0.02 -0.43 16 37 H 0.39 -1.75 8.70 -74.06 -0.64 -2.40 16 38 H -0.31 -1.04 7.11 99.48 0.71 -0.34 16 39 H -0.27 1.03 7.01 99.48 0.70 1.73 16 40 H 0.16 -1.91 4.83 -2.91 -0.01 -1.93 16 41 H 0.18 -2.49 6.30 -2.91 -0.02 -2.51 16 42 H 0.08 -0.26 8.14 -2.39 -0.02 -0.27 16 43 H 0.04 0.24 8.14 -2.39 -0.02 0.22 16 44 H 0.05 0.13 8.14 -2.39 -0.02 0.11 16 45 H 0.06 -0.01 8.14 -2.39 -0.02 -0.03 16 Total: 0.00 -25.58 382.22 -0.15 -25.72 By element: Atomic # 1 Polarization: -17.29 SS G_CDS: -0.40 Total: -17.69 kcal Atomic # 6 Polarization: 4.04 SS G_CDS: 3.44 Total: 7.48 kcal Atomic # 7 Polarization: 3.37 SS G_CDS: -2.25 Total: 1.12 kcal Atomic # 8 Polarization: -10.72 SS G_CDS: -2.32 Total: -13.04 kcal Atomic # 14 Polarization: -4.41 SS G_CDS: 2.05 Total: -2.36 kcal Atomic # 35 Polarization: -0.56 SS G_CDS: -0.68 Total: -1.24 kcal Total: -25.58 -0.15 -25.72 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_4279154_6201210.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -57.553 kcal (2) G-P(sol) polarization free energy of solvation -25.578 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -83.131 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.146 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.724 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.277 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds