Wall clock time and date at job start Tue Mar 9 2021 14:56:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.35534 * 125.67722 * 2 1 4 4 C 1.35446 * 108.87411 * 179.97438 * 3 2 1 5 5 C 1.50703 * 126.07382 * 179.97438 * 4 3 2 6 6 O 1.42894 * 109.47254 * 120.01840 * 5 4 3 7 7 Si 1.86304 * 109.46639 * 0.02562 * 5 4 3 8 8 C 1.39843 * 107.86345 * 359.73724 * 4 3 2 9 9 C 1.37643 * 125.67856 * 179.97438 * 2 1 3 10 10 C 1.46683 * 126.23450 * 0.02562 * 9 2 1 11 11 O 1.21691 * 119.99603 * 5.17708 * 10 9 2 12 12 N 1.34775 * 120.00134 * 185.17816 * 10 9 2 13 13 C 1.46495 * 120.00041 * 174.41045 * 12 10 9 14 14 H 1.09000 * 109.47400 * 35.00119 * 13 12 10 15 15 C 1.53003 * 109.47194 * 155.00312 * 13 12 10 16 16 C 1.52997 * 109.47111 * 59.99715 * 15 13 12 17 17 C 1.53002 * 109.47133 * 60.00340 * 16 15 13 18 18 H 1.09004 * 109.47099 * 59.99471 * 17 16 15 19 19 C 1.52995 * 109.47439 * 179.97438 * 17 16 15 20 20 O 1.42894 * 109.47428 * 184.99820 * 19 17 16 21 21 C 1.53003 * 109.46845 * 299.99823 * 17 16 15 22 22 C 1.52997 * 109.47111 * 60.00163 * 21 17 16 23 23 H 1.09003 * 109.46976 * 270.72392 * 1 2 3 24 24 H 1.09005 * 109.47347 * 30.71940 * 1 2 3 25 25 H 1.08998 * 109.46977 * 150.71978 * 1 2 3 26 26 H 1.08005 * 125.56607 * 359.93941 * 3 2 1 27 27 H 1.08996 * 109.47245 * 240.02464 * 5 4 3 28 28 H 0.96701 * 114.00709 * 300.00211 * 6 5 4 29 29 H 1.48497 * 110.00071 * 58.68152 * 7 5 4 30 30 H 1.48503 * 109.99769 * 180.02562 * 7 5 4 31 31 H 1.08000 * 126.45830 * 180.29874 * 8 4 3 32 32 H 0.97004 * 119.99781 * 354.41351 * 12 10 9 33 33 H 1.08994 * 109.46760 * 299.99839 * 15 13 12 34 34 H 1.09004 * 109.46985 * 180.02562 * 15 13 12 35 35 H 1.08990 * 109.47729 * 300.00169 * 16 15 13 36 36 H 1.09002 * 109.47135 * 179.97438 * 16 15 13 37 37 H 1.09009 * 109.46585 * 64.99751 * 19 17 16 38 38 H 1.08996 * 109.47170 * 305.00164 * 19 17 16 39 39 H 0.96703 * 114.00355 * 180.02562 * 20 19 17 40 40 H 1.09003 * 109.46805 * 179.97438 * 21 17 16 41 41 H 1.08990 * 109.46962 * 299.99525 * 21 17 16 42 42 H 1.09005 * 109.47136 * 179.97438 * 22 21 17 43 43 H 1.09004 * 109.47560 * 59.99907 * 22 21 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2555 1.1010 0.0000 4 6 3.5521 0.7094 0.0006 5 6 4.7537 1.6189 0.0002 6 8 5.5400 1.3698 1.1671 7 14 4.1886 3.3942 -0.0003 8 6 3.5780 -0.6888 0.0071 9 6 2.2678 -1.1181 0.0005 10 6 1.8124 -2.5124 0.0006 11 8 0.6258 -2.7649 -0.0949 12 7 2.7081 -3.5139 0.1064 13 6 2.2471 -4.8989 0.2299 14 1 1.3417 -5.0346 -0.3617 15 6 3.3357 -5.8460 -0.2790 16 6 4.6065 -5.6555 0.5514 17 6 4.3073 -5.9646 2.0197 18 1 3.9642 -6.9951 2.1115 19 6 5.5782 -5.7747 2.8501 20 8 5.3299 -6.1744 4.1993 21 6 3.2187 -5.0174 2.5286 22 6 1.9480 -5.2079 1.6982 23 1 -0.3633 0.0130 1.0276 24 1 -0.3634 0.8835 -0.5250 25 1 -0.3633 -0.8964 -0.5026 26 1 1.9082 2.1237 -0.0009 27 1 5.3535 1.4282 -0.8897 28 1 5.0690 1.5197 1.9982 29 1 3.3435 3.6586 1.1917 30 1 5.3643 4.3014 -0.0013 31 1 4.4583 -1.3143 0.0136 32 1 3.6580 -3.3175 0.1009 33 1 3.5488 -5.6259 -1.3250 34 1 2.9924 -6.8766 -0.1876 35 1 4.9495 -4.6251 0.4596 36 1 5.3818 -6.3306 0.1891 37 1 5.8717 -4.7250 2.8302 38 1 6.3796 -6.3840 2.4323 39 1 6.0940 -6.0805 4.7844 40 1 3.0053 -5.2379 3.5746 41 1 3.5618 -3.9870 2.4368 42 1 1.1723 -4.5335 2.0611 43 1 1.6049 -6.2385 1.7900 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7207534_10803934.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:56:01 Heat of formation + Delta-G solvation = -78.362215 kcal Electronic energy + Delta-G solvation = -24818.107799 eV Core-core repulsion = 21251.097746 eV Total energy + Delta-G solvation = -3567.010053 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.162 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -42.58165 -41.03868 -39.31451 -37.84262 -37.44210 -35.01556 -33.83048 -32.11569 -31.80669 -30.33910 -28.31005 -26.46049 -25.69573 -24.11401 -23.64110 -22.13976 -21.37780 -20.61855 -20.13659 -18.95051 -18.20965 -17.85974 -16.90540 -16.87480 -16.82077 -16.29298 -15.98973 -15.85615 -15.59057 -15.38567 -15.00033 -14.90195 -14.74142 -14.38522 -14.01003 -13.95680 -13.51222 -13.48383 -13.24827 -13.20906 -13.13889 -13.02943 -12.46818 -12.42154 -12.15747 -11.80229 -11.57892 -11.33606 -11.15956 -11.12330 -10.82433 -10.48164 -10.16639 -9.70033 -9.26937 -4.86224 0.40008 1.37281 1.57468 1.59730 1.68645 2.03806 2.28054 2.34182 3.29457 3.53515 3.60821 3.70091 3.74060 3.84173 3.90151 4.02795 4.04122 4.22947 4.27073 4.34814 4.38882 4.39938 4.41532 4.46938 4.48728 4.64724 4.70508 4.72174 4.73843 4.75976 4.79101 4.99174 5.03044 5.08203 5.13637 5.17611 5.21780 5.37954 5.41792 5.48718 5.67101 5.87899 6.16109 6.45827 6.60484 6.88046 7.11598 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.060 3.940 2 N -0.412 5.412 3 C 0.034 3.966 4 C -0.215 4.215 5 C -0.044 4.044 6 O -0.551 6.551 7 Si 0.767 3.233 8 C -0.112 4.112 9 C -0.079 4.079 10 C 0.586 3.414 11 O -0.584 6.584 12 N -0.699 5.699 13 C 0.149 3.851 14 H 0.075 0.925 15 C -0.119 4.119 16 C -0.111 4.111 17 C -0.086 4.086 18 H 0.071 0.929 19 C 0.075 3.925 20 O -0.597 6.597 21 C -0.101 4.101 22 C -0.127 4.127 23 H 0.078 0.922 24 H 0.116 0.884 25 H 0.087 0.913 26 H 0.200 0.800 27 H 0.120 0.880 28 H 0.383 0.617 29 H -0.282 1.282 30 H -0.307 1.307 31 H 0.155 0.845 32 H 0.411 0.589 33 H 0.082 0.918 34 H 0.089 0.911 35 H 0.071 0.929 36 H 0.084 0.916 37 H 0.051 0.949 38 H 0.058 0.942 39 H 0.395 0.605 40 H 0.051 0.949 41 H 0.057 0.943 42 H 0.043 0.957 43 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.049 1.112 -2.304 3.278 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 N -0.084 5.084 3 C -0.103 4.103 4 C -0.222 4.222 5 C -0.154 4.154 6 O -0.358 6.358 7 Si 0.672 3.328 8 C -0.138 4.138 9 C -0.192 4.192 10 C 0.375 3.625 11 O -0.466 6.466 12 N -0.351 5.351 13 C 0.045 3.955 14 H 0.093 0.907 15 C -0.157 4.157 16 C -0.148 4.148 17 C -0.105 4.105 18 H 0.089 0.911 19 C -0.002 4.002 20 O -0.405 6.405 21 C -0.139 4.139 22 C -0.165 4.165 23 H 0.096 0.904 24 H 0.134 0.866 25 H 0.105 0.895 26 H 0.217 0.783 27 H 0.138 0.862 28 H 0.232 0.768 29 H -0.208 1.208 30 H -0.235 1.235 31 H 0.173 0.827 32 H 0.249 0.751 33 H 0.101 0.899 34 H 0.107 0.893 35 H 0.089 0.911 36 H 0.103 0.897 37 H 0.069 0.931 38 H 0.076 0.924 39 H 0.244 0.756 40 H 0.070 0.930 41 H 0.076 0.924 42 H 0.062 0.938 43 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges 0.663 1.345 -2.628 3.025 hybrid contribution 0.961 -0.276 1.593 1.880 sum 1.624 1.069 -1.035 2.203 Atomic orbital electron populations 1.22448 0.74942 1.06228 1.04430 1.44022 1.07603 1.04818 1.51955 1.22325 0.89873 0.92501 1.05607 1.19831 0.94130 0.94629 1.13591 1.24488 0.92382 1.08042 0.90483 1.86547 1.42203 1.90384 1.16713 0.94362 0.79625 0.71894 0.86887 1.21379 0.94168 0.95206 1.03084 1.20108 0.91002 0.87630 1.20435 1.17217 0.85394 0.84336 0.75517 1.90762 1.17773 1.85333 1.52754 1.45687 1.09950 1.05922 1.73527 1.20974 0.98450 0.80000 0.96082 0.90698 1.21785 0.94112 0.99652 1.00171 1.21513 0.97856 1.02744 0.92698 1.21165 0.94464 1.00121 0.94710 0.91054 1.22321 0.96988 0.98872 0.82017 1.86435 1.43083 1.89498 1.21501 1.21380 0.94574 0.99191 0.98707 1.21884 0.97655 1.01969 0.95030 0.90354 0.86590 0.89464 0.78340 0.86224 0.76795 1.20828 1.23547 0.82734 0.75105 0.89897 0.89274 0.91079 0.89691 0.93067 0.92393 0.75602 0.93019 0.92388 0.93828 0.90298 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.04 10.66 127.77 1.36 1.32 16 2 N -0.41 -0.94 3.16 -534.30 -1.69 -2.63 16 3 C 0.03 -0.05 9.94 83.48 0.83 0.78 16 4 C -0.22 0.02 5.44 -20.12 -0.11 -0.09 16 5 C -0.04 0.06 3.02 71.24 0.22 0.28 16 6 O -0.55 -1.08 12.88 -148.98 -1.92 -3.00 16 7 Si 0.77 -2.49 30.59 68.60 2.10 -0.39 16 8 C -0.11 -0.17 10.29 22.57 0.23 0.06 16 9 C -0.08 -0.36 6.89 40.35 0.28 -0.08 16 10 C 0.59 4.01 7.74 86.45 0.67 4.68 16 11 O -0.58 -7.70 14.26 -4.32 -0.06 -7.76 16 12 N -0.70 -0.67 4.22 -446.50 -1.88 -2.55 16 13 C 0.15 0.10 2.83 44.99 0.13 0.23 16 14 H 0.07 0.34 7.50 -2.39 -0.02 0.32 16 15 C -0.12 0.54 5.61 30.59 0.17 0.71 16 16 C -0.11 0.63 5.03 30.59 0.15 0.79 16 17 C -0.09 0.14 2.43 -10.79 -0.03 0.12 16 18 H 0.07 0.02 8.14 -2.39 -0.02 0.00 16 19 C 0.08 -0.16 6.43 71.98 0.46 0.30 16 20 O -0.60 -0.90 13.20 -148.98 -1.97 -2.87 16 21 C -0.10 -0.16 4.94 30.59 0.15 -0.01 16 22 C -0.13 -0.32 5.60 30.59 0.17 -0.14 16 23 H 0.08 -0.09 8.14 -2.39 -0.02 -0.11 16 24 H 0.12 -0.82 8.14 -2.38 -0.02 -0.84 16 25 H 0.09 0.36 6.18 -2.39 -0.01 0.34 16 26 H 0.20 -1.57 6.19 -2.91 -0.02 -1.59 16 27 H 0.12 -0.31 7.96 -2.39 -0.02 -0.33 16 28 H 0.38 -1.15 8.70 -74.06 -0.64 -1.79 16 29 H -0.28 -0.10 7.11 99.48 0.71 0.61 16 30 H -0.31 -1.57 7.11 99.48 0.71 -0.87 16 31 H 0.16 -0.30 7.45 -2.91 -0.02 -0.32 16 32 H 0.41 -1.36 5.77 -92.71 -0.53 -1.89 16 33 H 0.08 -0.46 8.14 -2.39 -0.02 -0.48 16 34 H 0.09 -0.46 8.14 -2.39 -0.02 -0.48 16 35 H 0.07 -0.51 6.50 -2.39 -0.02 -0.52 16 36 H 0.08 -0.64 8.14 -2.39 -0.02 -0.66 16 37 H 0.05 -0.18 8.14 -2.38 -0.02 -0.19 16 38 H 0.06 -0.26 8.14 -2.39 -0.02 -0.28 16 39 H 0.39 -2.56 9.12 -74.06 -0.68 -3.23 16 40 H 0.05 0.29 7.82 -2.39 -0.02 0.27 16 41 H 0.06 0.11 7.60 -2.39 -0.02 0.10 16 42 H 0.04 0.32 8.14 -2.38 -0.02 0.30 16 43 H 0.08 0.11 8.14 -2.39 -0.02 0.09 16 Total: 0.00 -20.31 341.57 -1.51 -21.82 By element: Atomic # 1 Polarization: -10.78 SS G_CDS: -0.78 Total: -11.56 kcal Atomic # 6 Polarization: 4.25 SS G_CDS: 4.69 Total: 8.94 kcal Atomic # 7 Polarization: -1.61 SS G_CDS: -3.57 Total: -5.18 kcal Atomic # 8 Polarization: -9.68 SS G_CDS: -3.95 Total: -13.63 kcal Atomic # 14 Polarization: -2.49 SS G_CDS: 2.10 Total: -0.39 kcal Total: -20.31 -1.51 -21.82 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_10803934.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -56.540 kcal (2) G-P(sol) polarization free energy of solvation -20.313 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.853 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.510 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.822 kcal (6) G-S(sol) free energy of system = (1) + (5) -78.362 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds