Wall clock time and date at job start Tue Mar 9 2021 14:56:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86302 * 109.46761 * 2 1 4 4 C 1.50692 * 109.47167 * 119.99919 * 2 1 3 5 5 C 1.36456 * 120.29518 * 120.00290 * 4 2 1 6 6 C 1.40089 * 119.25573 * 179.97438 * 5 4 2 7 7 C 1.40855 * 132.86866 * 179.97438 * 6 5 4 8 8 C 1.46562 * 126.57462 * 359.97438 * 7 6 5 9 9 O 1.21722 * 120.00601 * 0.02562 * 8 7 6 10 10 N 1.34779 * 119.99559 * 179.97438 * 8 7 6 11 11 C 1.46509 * 119.99743 * 180.02562 * 10 8 7 12 12 H 1.08999 * 109.47272 * 325.00206 * 11 10 8 13 13 C 1.52998 * 109.46847 * 85.00178 * 11 10 8 14 14 C 1.52999 * 109.47110 * 60.00136 * 13 11 10 15 15 C 1.52998 * 109.47197 * 59.99835 * 14 13 11 16 16 H 1.09000 * 109.46970 * 60.00152 * 15 14 13 17 17 C 1.52999 * 109.47197 * 180.02562 * 15 14 13 18 18 O 1.42903 * 109.47256 * 295.00241 * 17 15 14 19 19 C 1.52998 * 109.46898 * 299.99903 * 15 14 13 20 20 C 1.52998 * 109.47198 * 205.00182 * 11 10 8 21 21 C 1.40551 * 106.84049 * 180.24739 * 7 6 5 22 22 N 1.30742 * 108.74724 * 359.61495 * 21 7 6 23 23 N 1.36584 * 120.23114 * 359.97438 * 6 5 4 24 24 C 1.36242 * 120.07739 * 0.02562 * 23 6 5 25 25 C 1.35183 * 120.70749 * 359.97438 * 24 23 6 26 26 H 0.96706 * 113.99781 * 60.00139 * 1 2 3 27 27 H 1.09000 * 109.47045 * 240.00809 * 2 1 3 28 28 H 1.48501 * 110.00018 * 60.00463 * 3 2 1 29 29 H 1.48504 * 109.99835 * 181.32072 * 3 2 1 30 30 H 1.07996 * 120.37053 * 359.95420 * 5 4 2 31 31 H 0.96997 * 120.00204 * 0.02562 * 10 8 7 32 32 H 1.09007 * 109.47007 * 179.97438 * 13 11 10 33 33 H 1.08996 * 109.47207 * 299.99740 * 13 11 10 34 34 H 1.08994 * 109.47089 * 299.99570 * 14 13 11 35 35 H 1.09002 * 109.46929 * 179.97438 * 14 13 11 36 36 H 1.08997 * 109.47286 * 174.99802 * 17 15 14 37 37 H 1.09008 * 109.47201 * 54.99582 * 17 15 14 38 38 H 0.96700 * 114.00311 * 180.02562 * 18 17 15 39 39 H 1.09004 * 109.46765 * 179.97438 * 19 15 14 40 40 H 1.09003 * 109.47228 * 299.99474 * 19 15 14 41 41 H 1.08994 * 109.47318 * 180.02562 * 20 11 10 42 42 H 1.09002 * 109.47117 * 59.99940 * 20 11 10 43 43 H 1.08001 * 125.62628 * 179.74214 * 21 7 6 44 44 H 1.08001 * 119.64423 * 180.02562 * 24 23 6 45 45 H 1.08007 * 119.83984 * 179.97438 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2304 5 6 2.7163 -1.8203 1.1122 6 6 3.1716 -2.4633 2.2705 7 6 3.9754 -3.6004 2.4822 8 6 4.5748 -4.4507 1.4498 9 8 4.3949 -4.1977 0.2729 10 7 5.3260 -5.5123 1.8037 11 6 5.9256 -6.3620 0.7718 12 1 5.2502 -6.4293 -0.0811 13 6 7.2564 -5.7557 0.3219 14 6 8.2044 -5.6613 1.5191 15 6 8.4479 -7.0604 2.0884 16 1 8.8940 -7.6925 1.3206 17 6 9.3954 -6.9659 3.2860 18 8 10.6757 -6.5089 2.8455 19 6 7.1171 -7.6666 2.5383 20 6 6.1691 -7.7611 1.3411 21 6 4.0871 -3.7669 3.8734 22 7 3.4189 -2.8120 4.4658 23 7 2.8324 -1.9818 3.5029 24 6 2.0482 -0.8729 3.6105 25 6 1.5974 -0.2363 2.5064 26 1 -0.3933 0.4417 -0.7651 27 1 1.7923 -0.5137 -0.8901 28 1 1.5614 2.4679 1.2085 29 1 3.5345 1.7704 -0.0322 30 1 2.9831 -2.1989 0.1367 31 1 5.4696 -5.7138 2.7416 32 1 7.7028 -6.3881 -0.4456 33 1 7.0830 -4.7590 -0.0837 34 1 7.7583 -5.0292 2.2868 35 1 9.1526 -5.2298 1.1985 36 1 9.4988 -7.9487 3.7459 37 1 8.9904 -6.2643 4.0153 38 1 11.3287 -6.4255 3.5539 39 1 7.2905 -8.6635 2.9435 40 1 6.6710 -7.0345 3.3061 41 1 6.6156 -8.3931 0.5735 42 1 5.2210 -8.1929 1.6616 43 1 4.6361 -4.5527 4.3709 44 1 1.7846 -0.4980 4.5885 45 1 0.9762 0.6413 2.6081 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207534_11618758.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:56:07 Heat of formation + Delta-G solvation = -19.324106 kcal Electronic energy + Delta-G solvation = -28744.779815 eV Core-core repulsion = 24730.225515 eV Total energy + Delta-G solvation = -4014.554301 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.157 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -43.28671 -41.05734 -39.42234 -39.00524 -37.42612 -37.30885 -34.64024 -34.24106 -32.16979 -31.85255 -31.70784 -29.99954 -27.35028 -26.37759 -24.97567 -23.83880 -23.63684 -23.00042 -22.08420 -21.37085 -20.10613 -19.24272 -18.50727 -18.27222 -17.90189 -17.62514 -16.94245 -16.79671 -16.64530 -16.39581 -15.87052 -15.79247 -15.67695 -15.52386 -14.95325 -14.73851 -14.70412 -14.57558 -14.27566 -13.92341 -13.87808 -13.43050 -13.32622 -13.18181 -13.02128 -12.98392 -12.60623 -12.45903 -12.16978 -12.08568 -11.92863 -11.59363 -11.55937 -11.29797 -11.11237 -10.85282 -10.77373 -10.70571 -10.28169 -9.90610 -8.75871 -5.15868 -0.56558 -0.12518 1.00395 1.07836 1.14197 1.53141 1.86317 2.03208 2.33500 2.63215 2.97833 3.12833 3.17371 3.41630 3.60834 3.65146 3.68601 3.72002 3.84757 3.88953 4.01328 4.03096 4.16026 4.23507 4.24658 4.33748 4.36217 4.44199 4.45630 4.51035 4.53935 4.61041 4.66602 4.73927 4.75174 4.96732 5.04897 5.08026 5.11079 5.13055 5.15020 5.27170 5.32361 5.42937 5.45211 5.64492 5.68438 6.31604 6.45975 6.66505 6.67878 7.45875 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.073 4.073 3 Si 0.703 3.297 4 C -0.031 4.031 5 C -0.092 4.092 6 C 0.167 3.833 7 C -0.314 4.314 8 C 0.602 3.398 9 O -0.550 6.550 10 N -0.721 5.721 11 C 0.149 3.851 12 H 0.090 0.910 13 C -0.131 4.131 14 C -0.108 4.108 15 C -0.089 4.089 16 H 0.080 0.920 17 C 0.079 3.921 18 O -0.573 6.573 19 C -0.115 4.115 20 C -0.126 4.126 21 C 0.118 3.882 22 N -0.312 5.312 23 N -0.265 5.265 24 C 0.113 3.887 25 C -0.146 4.146 26 H 0.387 0.613 27 H 0.082 0.918 28 H -0.249 1.249 29 H -0.256 1.256 30 H 0.165 0.835 31 H 0.395 0.605 32 H 0.072 0.928 33 H 0.069 0.931 34 H 0.059 0.941 35 H 0.069 0.931 36 H 0.045 0.955 37 H 0.044 0.956 38 H 0.380 0.620 39 H 0.070 0.930 40 H 0.061 0.939 41 H 0.082 0.918 42 H 0.073 0.927 43 H 0.197 0.803 44 H 0.178 0.822 45 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.839 1.207 0.225 1.487 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.349 6.349 2 C -0.182 4.182 3 Si 0.602 3.398 4 C -0.037 4.037 5 C -0.112 4.112 6 C 0.046 3.954 7 C -0.328 4.328 8 C 0.391 3.609 9 O -0.429 6.429 10 N -0.373 5.373 11 C 0.044 3.956 12 H 0.108 0.892 13 C -0.170 4.170 14 C -0.145 4.145 15 C -0.107 4.107 16 H 0.098 0.902 17 C 0.001 3.999 18 O -0.378 6.378 19 C -0.152 4.152 20 C -0.164 4.164 21 C -0.063 4.063 22 N -0.132 5.132 23 N -0.030 5.030 24 C -0.013 4.013 25 C -0.167 4.167 26 H 0.236 0.764 27 H 0.101 0.899 28 H -0.173 1.173 29 H -0.180 1.180 30 H 0.183 0.817 31 H 0.231 0.769 32 H 0.091 0.909 33 H 0.088 0.912 34 H 0.078 0.922 35 H 0.088 0.912 36 H 0.063 0.937 37 H 0.062 0.938 38 H 0.227 0.773 39 H 0.088 0.912 40 H 0.080 0.920 41 H 0.100 0.900 42 H 0.091 0.909 43 H 0.214 0.786 44 H 0.195 0.805 45 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -0.984 2.061 1.026 2.504 hybrid contribution 0.651 -1.042 0.666 1.398 sum -0.333 1.018 1.692 2.002 Atomic orbital electron populations 1.86477 1.16455 1.81980 1.50020 1.24695 0.86344 1.10567 0.96622 0.95337 0.81372 0.75561 0.87556 1.19440 0.96002 0.93828 0.94396 1.20707 0.98207 0.93910 0.98350 1.19237 0.95766 0.94321 0.86069 1.19653 1.15990 1.03560 0.93631 1.16807 0.77286 0.79616 0.87236 1.90774 1.61881 1.71715 1.18501 1.45813 1.52407 1.29100 1.10002 1.20932 0.94530 0.88981 0.91112 0.89162 1.21940 0.94873 1.02077 0.98105 1.21473 0.99597 0.95850 0.97620 1.21185 0.94170 0.97984 0.97382 0.90187 1.22239 0.83908 0.97688 0.96075 1.86482 1.22389 1.89866 1.39079 1.21523 0.94690 1.01169 0.97840 1.21816 1.00051 0.95967 0.98582 1.24036 0.94477 0.95760 0.92000 1.77626 1.18603 1.06228 1.10783 1.46088 1.32084 1.18971 1.05814 1.21574 0.92423 0.85421 1.01859 1.20841 1.02824 1.02571 0.90458 0.76414 0.89949 1.17271 1.17996 0.81742 0.76941 0.90929 0.91207 0.92232 0.91195 0.93678 0.93773 0.77331 0.91152 0.92039 0.89985 0.90858 0.78594 0.80485 0.82074 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.60 12.76 -35.23 -0.45 0.15 16 2 C -0.07 0.07 2.81 36.00 0.10 0.17 16 3 Si 0.70 -1.47 31.96 -169.99 -5.43 -6.91 16 4 C -0.03 -0.05 4.53 -104.55 -0.47 -0.53 16 5 C -0.09 -0.30 9.35 -39.53 -0.37 -0.67 16 6 C 0.17 0.71 6.76 -84.07 -0.57 0.14 16 7 C -0.31 -1.10 6.17 -104.68 -0.65 -1.74 16 8 C 0.60 2.26 7.75 -12.90 -0.10 2.16 16 9 O -0.55 -3.74 15.37 5.17 0.08 -3.66 16 10 N -0.72 -0.38 4.22 -55.14 -0.23 -0.61 16 11 C 0.15 0.05 2.78 -67.93 -0.19 -0.14 16 12 H 0.09 0.18 7.58 -51.93 -0.39 -0.21 16 13 C -0.13 -0.12 5.60 -26.73 -0.15 -0.27 16 14 C -0.11 -0.06 4.94 -26.73 -0.13 -0.19 16 15 C -0.09 0.06 2.43 -90.62 -0.22 -0.16 16 16 H 0.08 0.03 8.14 -51.93 -0.42 -0.40 16 17 C 0.08 -0.06 6.43 37.16 0.24 0.17 16 18 O -0.57 -0.43 13.19 -35.23 -0.46 -0.89 16 19 C -0.11 0.26 5.03 -26.73 -0.13 0.13 16 20 C -0.13 0.22 5.61 -26.73 -0.15 0.07 16 21 C 0.12 0.20 11.44 -17.14 -0.20 0.00 16 22 N -0.31 -1.16 12.57 30.75 0.39 -0.77 16 23 N -0.27 -0.96 3.86 -10.54 -0.04 -1.00 16 24 C 0.11 0.13 11.17 -16.68 -0.19 -0.06 16 25 C -0.15 -0.11 8.67 -39.95 -0.35 -0.46 16 26 H 0.39 -2.36 8.74 45.56 0.40 -1.96 16 27 H 0.08 -0.18 7.71 -51.93 -0.40 -0.58 16 28 H -0.25 -0.03 7.07 56.52 0.40 0.37 16 29 H -0.26 -0.34 7.11 56.52 0.40 0.06 16 30 H 0.17 0.53 7.01 -52.49 -0.37 0.16 16 31 H 0.40 -0.72 5.79 -40.82 -0.24 -0.96 16 32 H 0.07 0.03 8.14 -51.92 -0.42 -0.39 16 33 H 0.07 0.21 8.14 -51.93 -0.42 -0.21 16 34 H 0.06 0.04 7.60 -51.93 -0.39 -0.35 16 35 H 0.07 0.15 7.82 -51.93 -0.41 -0.25 16 36 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 37 H 0.04 -0.07 8.14 -51.92 -0.42 -0.49 16 38 H 0.38 -1.23 9.12 45.56 0.42 -0.82 16 39 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 40 H 0.06 -0.19 6.51 -51.93 -0.34 -0.53 16 41 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 42 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 43 H 0.20 -0.53 7.46 -52.49 -0.39 -0.92 16 44 H 0.18 -0.32 8.06 -52.49 -0.42 -0.74 16 45 H 0.16 -0.18 7.52 -52.48 -0.39 -0.58 16 LS Contribution 365.63 15.07 5.51 5.51 Total: 0.00 -10.94 365.63 -9.68 -20.62 By element: Atomic # 1 Polarization: -5.56 SS G_CDS: -5.51 Total: -11.07 kcal Atomic # 6 Polarization: 2.15 SS G_CDS: -3.52 Total: -1.37 kcal Atomic # 7 Polarization: -2.49 SS G_CDS: 0.11 Total: -2.38 kcal Atomic # 8 Polarization: -3.57 SS G_CDS: -0.83 Total: -4.40 kcal Atomic # 14 Polarization: -1.47 SS G_CDS: -5.43 Total: -6.91 kcal Total LS contribution 5.51 Total: 5.51 kcal Total: -10.94 -9.68 -20.62 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_11618758.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 1.294 kcal (2) G-P(sol) polarization free energy of solvation -10.937 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -9.644 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.681 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.618 kcal (6) G-S(sol) free energy of system = (1) + (5) -19.324 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds