Wall clock time and date at job start Tue Mar 9 2021 14:57:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86298 * 109.47313 * 2 1 4 4 C 1.50701 * 109.47241 * 120.00486 * 2 1 3 5 5 C 1.38337 * 119.87119 * 64.99602 * 4 2 1 6 6 C 1.38006 * 120.12406 * 180.02562 * 5 4 2 7 7 C 1.39397 * 119.87340 * 359.97438 * 6 5 4 8 8 C 1.48275 * 120.13137 * 180.02562 * 7 6 5 9 9 C 1.39505 * 119.98027 * 180.02562 * 8 7 6 10 10 C 1.37668 * 120.02342 * 180.02562 * 9 8 7 11 11 C 1.39711 * 119.97510 * 359.97438 * 10 9 8 12 12 C 1.47721 * 120.02191 * 179.97438 * 11 10 9 13 13 O 1.21578 * 119.99901 * 0.02562 * 12 11 10 14 14 N 1.34770 * 119.99833 * 180.02562 * 12 11 10 15 15 C 1.46502 * 119.99553 * 180.02562 * 14 12 11 16 16 H 1.08992 * 109.47680 * 324.99444 * 15 14 12 17 17 C 1.52999 * 109.47290 * 85.00084 * 15 14 12 18 18 C 1.52996 * 109.47461 * 59.99749 * 17 15 14 19 19 C 1.52995 * 109.47236 * 59.99859 * 18 17 15 20 20 H 1.09007 * 109.46945 * 60.00508 * 19 18 17 21 21 C 1.53006 * 109.47234 * 180.02562 * 19 18 17 22 22 O 1.42895 * 109.47036 * 295.00525 * 21 19 18 23 23 C 1.52996 * 109.47185 * 300.00089 * 19 18 17 24 24 C 1.52996 * 109.46951 * 60.00193 * 23 19 18 25 25 C 1.39707 * 119.95031 * 0.26309 * 11 10 9 26 26 C 1.37660 * 119.97718 * 359.45853 * 25 11 10 27 27 C 1.39404 * 119.74520 * 0.27764 * 7 6 5 28 28 C 1.37999 * 119.86881 * 359.46856 * 27 7 6 29 29 H 0.96707 * 114.00057 * 299.99470 * 1 2 3 30 30 H 1.09005 * 109.46501 * 239.99858 * 2 1 3 31 31 H 1.48498 * 109.99885 * 178.68308 * 3 2 1 32 32 H 1.48497 * 110.00078 * 300.00237 * 3 2 1 33 33 H 1.07997 * 119.94156 * 359.97438 * 5 4 2 34 34 H 1.08004 * 120.06117 * 179.97438 * 6 5 4 35 35 H 1.07992 * 119.98629 * 359.97338 * 9 8 7 36 36 H 1.08002 * 120.00754 * 180.02562 * 10 9 8 37 37 H 0.97002 * 120.00377 * 359.97438 * 14 12 11 38 38 H 1.08997 * 109.47294 * 179.97438 * 17 15 14 39 39 H 1.09000 * 109.46971 * 299.99398 * 17 15 14 40 40 H 1.09006 * 109.46758 * 299.99685 * 18 17 15 41 41 H 1.09003 * 109.47204 * 180.02562 * 18 17 15 42 42 H 1.09001 * 109.47002 * 55.00002 * 21 19 18 43 43 H 1.08993 * 109.46955 * 175.00440 * 21 19 18 44 44 H 0.96700 * 113.99916 * 179.97438 * 22 21 19 45 45 H 1.09006 * 109.46822 * 179.97438 * 23 19 18 46 46 H 1.08997 * 109.47474 * 299.99873 * 23 19 18 47 47 H 1.08996 * 109.47312 * 60.00123 * 24 23 19 48 48 H 1.09007 * 109.46984 * 179.97438 * 24 23 19 49 49 H 1.07998 * 120.00652 * 179.72080 * 25 11 10 50 50 H 1.08003 * 119.98708 * 180.27834 * 26 25 11 51 51 H 1.08008 * 120.06458 * 179.72560 * 27 7 6 52 52 H 1.08003 * 119.93598 * 180.27135 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.6830 -2.0613 1.3956 6 6 2.1401 -2.7171 2.5206 7 6 2.8538 -2.0157 3.4911 8 6 3.3481 -2.7147 4.7018 9 6 4.0616 -2.0096 5.6713 10 6 4.5214 -2.6578 6.7954 11 6 4.2729 -4.0221 6.9653 12 6 4.7663 -4.7188 8.1708 13 8 5.3885 -4.1048 9.0158 14 7 4.5267 -6.0349 8.3340 15 6 5.0156 -6.7257 9.5299 16 1 5.9755 -6.3033 9.8266 17 6 4.0078 -6.5508 10.6677 18 6 2.6604 -7.1439 10.2512 19 6 2.8312 -8.6333 9.9457 20 1 3.1950 -9.1473 10.8355 21 6 1.4838 -9.2263 9.5286 22 8 0.5762 -9.1680 10.6308 23 6 3.8389 -8.8082 8.8079 24 6 5.1864 -8.2152 9.2244 25 6 3.5626 -4.7282 5.9913 26 6 3.0987 -4.0769 4.8708 27 6 3.0965 -0.6535 3.3217 28 6 2.6390 -0.0094 2.1902 29 1 -0.3933 0.4417 0.7651 30 1 1.7922 -0.5139 -0.8900 31 1 3.5346 1.7702 0.0321 32 1 1.5615 2.4679 -1.2084 33 1 1.1296 -2.6036 0.6433 34 1 1.9453 -3.7716 2.6488 35 1 4.2540 -0.9552 5.5396 36 1 5.0734 -2.1116 7.5461 37 1 4.0299 -6.5247 7.6600 38 1 4.3713 -7.0651 11.5573 39 1 3.8861 -5.4897 10.8853 40 1 2.2966 -6.6298 9.3615 41 1 1.9423 -7.0189 11.0617 42 1 1.0784 -8.6550 8.6935 43 1 1.6218 -10.2642 9.2260 44 1 -0.3005 -9.5275 10.4377 45 1 3.9610 -9.8694 8.5906 46 1 3.4752 -8.2942 7.9182 47 1 5.5502 -8.7292 10.1141 48 1 5.9045 -8.3402 8.4139 49 1 3.3738 -5.7838 6.1196 50 1 2.5457 -4.6217 4.1199 51 1 3.6451 -0.1041 4.0725 52 1 2.8302 1.0450 2.0557 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207534_13158362.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:57:09 Heat of formation + Delta-G solvation = -75.016831 kcal Electronic energy + Delta-G solvation = -32216.118486 eV Core-core repulsion = 27918.011089 eV Total energy + Delta-G solvation = -4298.107396 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.182 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -41.63201 -40.95801 -39.94334 -38.96931 -37.60961 -37.43357 -34.88866 -34.04467 -32.71512 -31.93972 -31.83672 -31.54793 -30.48962 -27.16786 -26.35853 -24.73796 -24.53748 -23.74349 -22.74228 -22.57611 -22.10899 -21.44650 -20.17296 -19.39850 -18.52720 -18.27451 -17.81289 -17.14016 -16.85772 -16.64963 -16.36161 -16.20460 -15.99529 -15.92962 -15.58933 -15.49402 -15.17000 -15.02273 -14.99943 -14.90561 -14.72120 -14.31018 -14.28895 -14.09925 -13.93895 -13.62006 -13.53901 -13.26111 -13.17902 -13.05737 -12.80142 -12.59804 -12.51313 -12.23673 -12.05182 -12.01553 -11.68433 -11.62970 -11.37780 -11.17580 -10.91001 -10.87928 -10.78079 -10.46326 -10.12106 -10.05142 -10.02768 -9.12198 -5.08375 -0.71180 0.28057 0.31310 0.48495 1.23701 1.58979 1.87996 1.93339 2.13542 2.58860 2.97310 3.12363 3.33140 3.43521 3.51014 3.56917 3.62700 3.65410 3.72937 3.79041 3.84012 3.89789 3.94128 3.97622 4.16908 4.17179 4.20313 4.27006 4.29488 4.37178 4.38651 4.42423 4.44878 4.54178 4.55453 4.60210 4.61878 4.68720 4.78418 4.83953 4.90527 4.96456 4.97377 5.02994 5.05145 5.08783 5.12989 5.22650 5.25750 5.34604 5.36576 5.38673 5.40998 5.53998 5.57975 5.74552 5.83410 6.48992 6.50677 6.63017 7.23873 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.069 4.069 3 Si 0.686 3.314 4 C -0.114 4.114 5 C -0.091 4.091 6 C -0.105 4.105 7 C -0.048 4.048 8 C -0.018 4.018 9 C -0.118 4.118 10 C -0.054 4.054 11 C -0.135 4.135 12 C 0.559 3.441 13 O -0.534 6.534 14 N -0.719 5.719 15 C 0.145 3.855 16 H 0.091 0.909 17 C -0.132 4.132 18 C -0.108 4.108 19 C -0.089 4.089 20 H 0.081 0.919 21 C 0.079 3.921 22 O -0.572 6.572 23 C -0.115 4.115 24 C -0.127 4.127 25 C -0.083 4.083 26 C -0.118 4.118 27 C -0.101 4.101 28 C -0.113 4.113 29 H 0.380 0.620 30 H 0.114 0.886 31 H -0.257 1.257 32 H -0.254 1.254 33 H 0.129 0.871 34 H 0.129 0.871 35 H 0.135 0.865 36 H 0.140 0.860 37 H 0.397 0.603 38 H 0.074 0.926 39 H 0.070 0.930 40 H 0.058 0.942 41 H 0.071 0.929 42 H 0.044 0.956 43 H 0.045 0.955 44 H 0.380 0.620 45 H 0.071 0.929 46 H 0.060 0.940 47 H 0.083 0.917 48 H 0.073 0.927 49 H 0.126 0.874 50 H 0.133 0.867 51 H 0.132 0.868 52 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.313 -2.229 -1.384 3.498 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.180 4.180 3 Si 0.588 3.412 4 C -0.115 4.115 5 C -0.109 4.109 6 C -0.123 4.123 7 C -0.048 4.048 8 C -0.019 4.019 9 C -0.135 4.135 10 C -0.073 4.073 11 C -0.138 4.138 12 C 0.346 3.654 13 O -0.411 6.411 14 N -0.372 5.372 15 C 0.041 3.959 16 H 0.109 0.891 17 C -0.170 4.170 18 C -0.146 4.146 19 C -0.108 4.108 20 H 0.099 0.901 21 C 0.001 3.999 22 O -0.378 6.378 23 C -0.152 4.152 24 C -0.164 4.164 25 C -0.101 4.101 26 C -0.136 4.136 27 C -0.118 4.118 28 C -0.131 4.131 29 H 0.227 0.773 30 H 0.131 0.869 31 H -0.182 1.182 32 H -0.179 1.179 33 H 0.147 0.853 34 H 0.147 0.853 35 H 0.152 0.848 36 H 0.158 0.842 37 H 0.234 0.766 38 H 0.092 0.908 39 H 0.088 0.912 40 H 0.077 0.923 41 H 0.090 0.910 42 H 0.062 0.938 43 H 0.063 0.937 44 H 0.227 0.773 45 H 0.089 0.911 46 H 0.079 0.921 47 H 0.101 0.899 48 H 0.092 0.908 49 H 0.144 0.856 50 H 0.150 0.850 51 H 0.150 0.850 52 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -0.753 -1.250 -1.454 2.060 hybrid contribution -0.666 -1.244 -0.851 1.648 sum -1.419 -2.494 -2.305 3.681 Atomic orbital electron populations 1.86514 1.16972 1.81707 1.49263 1.25075 0.85334 1.10154 0.97464 0.94755 0.81135 0.78014 0.87345 1.20452 0.99194 0.95040 0.96767 1.20974 0.98604 0.93741 0.97537 1.21312 0.97359 1.00108 0.93510 1.18816 0.98731 0.93477 0.93811 1.18982 0.96314 0.93304 0.93253 1.21249 0.98314 1.00481 0.93488 1.21235 0.96196 0.92959 0.96907 1.20007 1.02953 0.95094 0.95754 1.18265 0.79335 0.81913 0.85866 1.90799 1.40379 1.65966 1.43972 1.46038 1.57932 1.09307 1.23923 1.20995 0.98241 0.91890 0.84776 0.89070 1.21943 0.95348 1.01965 0.97794 1.21477 0.97212 0.93996 1.01874 1.21191 0.93406 0.96962 0.99213 0.90110 1.22228 0.90087 0.99020 0.88546 1.86481 1.26274 1.86329 1.38712 1.21523 0.94729 1.01393 0.97585 1.21821 0.97432 0.94188 1.03005 1.21173 0.96230 0.99462 0.93283 1.21151 1.00641 0.93755 0.98043 1.21233 0.99379 0.93611 0.97605 1.20941 0.98663 0.99355 0.94092 0.77314 0.86869 1.18198 1.17900 0.85322 0.85325 0.84754 0.84219 0.76593 0.90762 0.91151 0.92287 0.91040 0.93786 0.93657 0.77280 0.91053 0.92148 0.89851 0.90841 0.85632 0.84972 0.85002 0.85259 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.07 12.83 -35.23 -0.45 -0.38 16 2 C -0.07 0.04 2.80 36.01 0.10 0.14 16 3 Si 0.69 -0.91 29.79 -169.99 -5.06 -5.97 16 4 C -0.11 0.04 5.36 -104.55 -0.56 -0.52 16 5 C -0.09 0.01 9.67 -39.63 -0.38 -0.37 16 6 C -0.11 0.05 9.43 -39.24 -0.37 -0.32 16 7 C -0.05 0.00 5.88 -104.90 -0.62 -0.61 16 8 C -0.02 0.00 5.88 -104.82 -0.62 -0.62 16 9 C -0.12 0.00 9.41 -39.32 -0.37 -0.37 16 10 C -0.05 -0.07 9.58 -39.24 -0.38 -0.44 16 11 C -0.14 -0.16 5.88 -104.92 -0.62 -0.78 16 12 C 0.56 1.42 7.73 -12.39 -0.10 1.33 16 13 O -0.53 -3.31 16.00 5.30 0.08 -3.23 16 14 N -0.72 0.19 4.18 -54.79 -0.23 -0.04 16 15 C 0.15 -0.02 2.78 -67.93 -0.19 -0.21 16 16 H 0.09 0.14 7.58 -51.93 -0.39 -0.26 16 17 C -0.13 -0.06 5.60 -26.73 -0.15 -0.21 16 18 C -0.11 0.00 4.94 -26.74 -0.13 -0.13 16 19 C -0.09 0.10 2.43 -90.62 -0.22 -0.12 16 20 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 21 C 0.08 -0.11 6.43 37.16 0.24 0.13 16 22 O -0.57 -0.16 13.20 -35.23 -0.46 -0.62 16 23 C -0.11 0.32 5.03 -26.74 -0.13 0.18 16 24 C -0.13 0.28 5.61 -26.73 -0.15 0.13 16 25 C -0.08 0.08 9.52 -39.24 -0.37 -0.30 16 26 C -0.12 0.11 9.41 -39.32 -0.37 -0.26 16 27 C -0.10 0.07 9.43 -39.24 -0.37 -0.30 16 28 C -0.11 0.11 8.65 -39.64 -0.34 -0.23 16 29 H 0.38 -1.49 8.70 45.56 0.40 -1.10 16 30 H 0.11 -0.02 7.96 -51.93 -0.41 -0.44 16 31 H -0.26 -0.28 7.11 56.52 0.40 0.12 16 32 H -0.25 -0.52 7.11 56.52 0.40 -0.12 16 33 H 0.13 -0.10 8.06 -52.49 -0.42 -0.52 16 34 H 0.13 -0.29 6.19 -52.48 -0.33 -0.62 16 35 H 0.13 -0.26 6.19 -52.49 -0.32 -0.59 16 36 H 0.14 0.19 7.64 -52.49 -0.40 -0.21 16 37 H 0.40 -0.99 4.88 -40.82 -0.20 -1.19 16 38 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 39 H 0.07 0.17 8.14 -51.93 -0.42 -0.25 16 40 H 0.06 0.00 7.60 -51.93 -0.39 -0.39 16 41 H 0.07 0.12 7.82 -51.93 -0.41 -0.29 16 42 H 0.04 -0.09 8.14 -51.93 -0.42 -0.52 16 43 H 0.05 -0.10 8.14 -51.93 -0.42 -0.52 16 44 H 0.38 -1.41 9.12 45.56 0.42 -1.00 16 45 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 46 H 0.06 -0.22 6.50 -51.93 -0.34 -0.56 16 47 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 48 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 49 H 0.13 -0.45 6.39 -52.49 -0.34 -0.78 16 50 H 0.13 -0.38 6.19 -52.48 -0.32 -0.71 16 51 H 0.13 -0.34 6.19 -52.48 -0.33 -0.66 16 52 H 0.13 -0.38 4.89 -52.48 -0.26 -0.64 16 LS Contribution 408.68 15.07 6.16 6.16 Total: 0.00 -9.21 408.68 -12.69 -21.90 By element: Atomic # 1 Polarization: -7.33 SS G_CDS: -6.63 Total: -13.96 kcal Atomic # 6 Polarization: 2.23 SS G_CDS: -6.10 Total: -3.86 kcal Atomic # 7 Polarization: 0.19 SS G_CDS: -0.23 Total: -0.04 kcal Atomic # 8 Polarization: -3.39 SS G_CDS: -0.83 Total: -4.23 kcal Atomic # 14 Polarization: -0.91 SS G_CDS: -5.06 Total: -5.97 kcal Total LS contribution 6.16 Total: 6.16 kcal Total: -9.21 -12.69 -21.90 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_13158362.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -53.112 kcal (2) G-P(sol) polarization free energy of solvation -9.214 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -62.326 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.691 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.905 kcal (6) G-S(sol) free energy of system = (1) + (5) -75.017 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds