Wall clock time and date at job start Tue Mar 9 2021 14:57:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86303 * 109.47099 * 2 1 4 4 C 1.50703 * 109.47272 * 239.99995 * 2 1 3 5 5 C 1.38897 * 119.67509 * 119.97517 * 4 2 1 6 6 C 1.36480 * 120.61469 * 179.97438 * 5 4 2 7 7 C 1.40064 * 119.82724 * 0.04571 * 6 5 4 8 8 C 1.41597 * 133.37926 * 179.97438 * 7 6 5 9 9 C 1.35867 * 107.72596 * 180.02562 * 8 7 6 10 10 C 1.47058 * 125.42435 * 179.97438 * 9 8 7 11 11 O 1.21653 * 119.99985 * 0.02562 * 10 9 8 12 12 N 1.34777 * 119.99966 * 179.74988 * 10 9 8 13 13 C 1.46504 * 119.99854 * 180.27718 * 12 10 9 14 14 H 1.09001 * 109.47451 * 34.99522 * 13 12 10 15 15 C 1.52994 * 109.46860 * 154.99819 * 13 12 10 16 16 C 1.53000 * 109.47517 * 59.99632 * 15 13 12 17 17 C 1.52997 * 109.46889 * 59.99829 * 16 15 13 18 18 H 1.09007 * 109.47320 * 60.00316 * 17 16 15 19 19 C 1.52997 * 109.47394 * 180.02562 * 17 16 15 20 20 O 1.42894 * 109.47471 * 185.00013 * 19 17 16 21 21 C 1.52998 * 109.47499 * 300.00242 * 17 16 15 22 22 C 1.52997 * 109.46930 * 274.99613 * 13 12 10 23 23 N 1.38146 * 109.14718 * 0.22562 * 9 8 7 24 24 C 1.37485 * 108.79179 * 359.62504 * 23 9 8 25 25 C 1.37715 * 119.67354 * 299.99910 * 4 2 1 26 26 H 0.96692 * 114.00338 * 60.00107 * 1 2 3 27 27 H 1.09005 * 109.47329 * 119.99672 * 2 1 3 28 28 H 1.48498 * 109.99923 * 60.00078 * 3 2 1 29 29 H 1.48502 * 110.00063 * 181.31972 * 3 2 1 30 30 H 1.08003 * 119.69201 * 359.97438 * 5 4 2 31 31 H 1.07997 * 120.08499 * 180.02562 * 6 5 4 32 32 H 1.07999 * 126.13547 * 0.02562 * 8 7 6 33 33 H 0.97000 * 119.99736 * 0.26993 * 12 10 9 34 34 H 1.09007 * 109.47166 * 179.97438 * 15 13 12 35 35 H 1.08998 * 109.47170 * 299.99435 * 15 13 12 36 36 H 1.08996 * 109.47417 * 179.97438 * 16 15 13 37 37 H 1.08998 * 109.47396 * 300.00182 * 16 15 13 38 38 H 1.09001 * 109.47226 * 305.00176 * 19 17 16 39 39 H 1.08995 * 109.47137 * 64.99784 * 19 17 16 40 40 H 0.96707 * 114.00197 * 179.97438 * 20 19 17 41 41 H 1.08998 * 109.47488 * 180.02562 * 21 17 16 42 42 H 1.09007 * 109.46895 * 300.00334 * 21 17 16 43 43 H 1.09000 * 109.47470 * 59.99994 * 22 13 12 44 44 H 1.08998 * 109.47338 * 180.02562 * 22 13 12 45 45 H 0.96997 * 125.60336 * 179.74424 * 23 9 8 46 46 H 1.08001 * 120.09710 * 0.02562 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7290 -0.0287 -2.1406 6 6 3.1949 -0.6535 -3.2609 7 6 2.8665 -1.9942 -3.4985 8 6 3.1814 -2.9033 -4.5375 9 6 2.5834 -4.0880 -4.2459 10 6 2.6562 -5.3047 -5.0686 11 8 3.2928 -5.3009 -6.1053 12 7 2.0223 -6.4258 -4.6712 13 6 2.0998 -7.6397 -5.4878 14 1 3.0838 -7.7027 -5.9526 15 6 1.8752 -8.8659 -4.6009 16 6 0.4941 -8.7775 -3.9485 17 6 -0.5814 -8.7304 -5.0356 18 1 -0.5238 -9.6336 -5.6432 19 6 -1.9625 -8.6412 -4.3833 20 8 -2.9716 -8.7145 -5.3924 21 6 -0.3568 -7.5041 -5.9225 22 6 1.0244 -7.5926 -6.5749 23 7 1.8916 -3.9657 -3.0565 24 6 2.0567 -2.6877 -2.5774 25 6 1.5946 -2.0289 -1.4417 26 1 -0.3933 0.4416 -0.7650 27 1 1.7923 -0.5138 0.8900 28 1 1.5614 2.4679 1.2085 29 1 3.5346 1.7703 -0.0321 30 1 2.9830 1.0053 -1.9599 31 1 3.8149 -0.1154 -3.9627 32 1 3.7880 -2.6927 -5.4058 33 1 1.5148 -6.4288 -3.8446 34 1 1.9324 -9.7692 -5.2085 35 1 2.6414 -8.8995 -3.8265 36 1 0.3339 -9.6513 -3.3170 37 1 0.4364 -7.8743 -3.3410 38 1 -2.0878 -9.4675 -3.6835 39 1 -2.0514 -7.6956 -3.8486 40 1 -3.8746 -8.6645 -5.0500 41 1 -1.1233 -7.4702 -6.6968 42 1 -0.4144 -6.6008 -5.3150 43 1 1.1843 -6.7189 -7.2067 44 1 1.0817 -8.4959 -7.1822 45 1 1.3756 -4.6669 -2.6287 46 1 0.9731 -2.5501 -0.7286 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207534_13158378.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:57:12 Heat of formation + Delta-G solvation = -66.470459 kcal Electronic energy + Delta-G solvation = -28290.704779 eV Core-core repulsion = 24339.531970 eV Total energy + Delta-G solvation = -3951.172809 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.162 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -42.71433 -41.22903 -39.61669 -38.88255 -37.56183 -36.91125 -34.93235 -33.28505 -32.07507 -31.91558 -30.79352 -30.40580 -27.20201 -26.30924 -24.50408 -23.83143 -23.25185 -22.29763 -22.01282 -21.35409 -20.30719 -19.69547 -18.45701 -18.35051 -17.79221 -17.12991 -16.85086 -16.63259 -16.35798 -16.08317 -15.97769 -15.59064 -15.52198 -15.40106 -14.95933 -14.81006 -14.75392 -14.65860 -14.44520 -14.08433 -14.02589 -13.58661 -13.34356 -13.22018 -13.06846 -12.62126 -12.60115 -12.53420 -12.32091 -11.97892 -11.71407 -11.65921 -11.46961 -11.25545 -11.20122 -10.96660 -10.93883 -10.47263 -10.20413 -9.32682 -8.83057 -5.02095 -0.33867 0.51100 1.01395 1.28274 1.64532 1.75745 1.95093 1.99265 2.28395 2.77164 3.06162 3.40190 3.47422 3.55826 3.59636 3.63211 3.69400 3.76797 3.88712 4.00045 4.08370 4.22709 4.23497 4.27852 4.29500 4.30598 4.36023 4.43183 4.46171 4.46619 4.52534 4.58868 4.60114 4.82938 4.87952 4.89494 4.94405 4.96618 4.97340 5.14714 5.27075 5.30146 5.31734 5.38337 5.42190 5.52006 5.60788 5.95888 6.19015 6.35742 6.54131 6.58336 7.02520 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.068 4.068 3 Si 0.693 3.307 4 C -0.088 4.088 5 C -0.146 4.146 6 C -0.050 4.050 7 C -0.116 4.116 8 C -0.100 4.100 9 C 0.014 3.986 10 C 0.585 3.415 11 O -0.517 6.517 12 N -0.721 5.721 13 C 0.146 3.854 14 H 0.094 0.906 15 C -0.127 4.127 16 C -0.114 4.114 17 C -0.090 4.090 18 H 0.082 0.918 19 C 0.079 3.921 20 O -0.572 6.572 21 C -0.108 4.108 22 C -0.133 4.133 23 N -0.579 5.579 24 C 0.115 3.885 25 C -0.104 4.104 26 H 0.380 0.620 27 H 0.114 0.886 28 H -0.256 1.256 29 H -0.257 1.257 30 H 0.129 0.871 31 H 0.132 0.868 32 H 0.158 0.842 33 H 0.393 0.607 34 H 0.085 0.915 35 H 0.073 0.927 36 H 0.072 0.928 37 H 0.058 0.942 38 H 0.046 0.954 39 H 0.043 0.957 40 H 0.381 0.619 41 H 0.072 0.928 42 H 0.056 0.944 43 H 0.071 0.929 44 H 0.076 0.924 45 H 0.416 0.584 46 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.692 -0.718 1.985 3.420 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.179 4.179 3 Si 0.595 3.405 4 C -0.090 4.090 5 C -0.165 4.165 6 C -0.069 4.069 7 C -0.121 4.121 8 C -0.127 4.127 9 C -0.095 4.095 10 C 0.371 3.629 11 O -0.392 6.392 12 N -0.373 5.373 13 C 0.042 3.958 14 H 0.112 0.888 15 C -0.165 4.165 16 C -0.152 4.152 17 C -0.108 4.108 18 H 0.100 0.900 19 C 0.001 3.999 20 O -0.378 6.378 21 C -0.146 4.146 22 C -0.171 4.171 23 N -0.184 5.184 24 C 0.005 3.995 25 C -0.125 4.125 26 H 0.227 0.773 27 H 0.131 0.869 28 H -0.181 1.181 29 H -0.182 1.182 30 H 0.146 0.854 31 H 0.150 0.850 32 H 0.176 0.824 33 H 0.228 0.772 34 H 0.104 0.896 35 H 0.092 0.908 36 H 0.090 0.910 37 H 0.076 0.924 38 H 0.064 0.936 39 H 0.061 0.939 40 H 0.228 0.772 41 H 0.091 0.909 42 H 0.075 0.925 43 H 0.090 0.910 44 H 0.095 0.905 45 H 0.254 0.746 46 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges -1.180 -0.665 1.817 2.266 hybrid contribution -0.961 -1.026 1.266 1.892 sum -2.142 -1.690 3.082 4.116 Atomic orbital electron populations 1.86492 1.17090 1.81720 1.49345 1.25078 0.85227 1.10298 0.97292 0.94542 0.81097 0.77890 0.86987 1.20031 0.98373 0.93816 0.96798 1.20488 1.00926 0.99714 0.95376 1.20386 0.97720 0.92092 0.96698 1.18227 1.02687 0.94895 0.96263 1.20980 1.01682 0.90353 0.99701 1.20141 1.03198 0.96661 0.89534 1.17196 0.79274 0.81708 0.84728 1.90881 1.41509 1.83426 1.23345 1.46024 1.53259 1.11527 1.26526 1.21042 1.00505 0.82854 0.91404 0.88774 1.21829 0.97116 0.97827 0.99711 1.21522 0.94152 1.02085 0.97459 1.21194 0.92351 1.00204 0.97051 0.89990 1.22218 0.88223 0.99501 0.89936 1.86481 1.18160 1.97131 1.35988 1.21481 0.96943 0.96863 0.99275 1.21955 0.94297 1.03261 0.97599 1.41887 1.45144 1.11237 1.20089 1.18308 1.00053 0.84664 0.96468 1.19850 1.02604 0.94149 0.95887 0.77271 0.86894 1.18139 1.18196 0.85351 0.84998 0.82391 0.77170 0.89640 0.90813 0.90954 0.92384 0.93622 0.93887 0.77216 0.90899 0.92486 0.91009 0.90546 0.74634 0.85581 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.16 12.76 -35.23 -0.45 -0.29 16 2 C -0.07 0.04 2.81 36.01 0.10 0.14 16 3 Si 0.69 -0.92 29.75 -169.99 -5.06 -5.97 16 4 C -0.09 0.01 5.40 -104.57 -0.56 -0.56 16 5 C -0.15 0.06 8.59 -39.97 -0.34 -0.28 16 6 C -0.05 -0.01 10.06 -39.53 -0.40 -0.41 16 7 C -0.12 -0.19 6.16 -106.93 -0.66 -0.85 16 8 C -0.10 -0.20 10.53 -39.15 -0.41 -0.61 16 9 C 0.01 0.02 6.97 -82.29 -0.57 -0.55 16 10 C 0.58 1.18 7.76 -12.68 -0.10 1.08 16 11 O -0.52 -2.89 16.50 5.23 0.09 -2.81 16 12 N -0.72 0.73 4.23 -55.00 -0.23 0.50 16 13 C 0.15 -0.13 2.78 -67.93 -0.19 -0.32 16 14 H 0.09 0.06 7.58 -51.93 -0.39 -0.33 16 15 C -0.13 0.35 5.61 -26.73 -0.15 0.20 16 16 C -0.11 0.37 5.03 -26.73 -0.13 0.24 16 17 C -0.09 0.14 2.43 -90.62 -0.22 -0.08 16 18 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 19 C 0.08 -0.13 6.43 37.16 0.24 0.11 16 20 O -0.57 -0.01 13.19 -35.23 -0.46 -0.47 16 21 C -0.11 0.05 4.94 -26.73 -0.13 -0.08 16 22 C -0.13 0.02 5.60 -26.73 -0.15 -0.13 16 23 N -0.58 0.37 6.07 -7.36 -0.04 0.32 16 24 C 0.12 0.11 7.25 -83.98 -0.61 -0.50 16 25 C -0.10 -0.03 9.61 -39.42 -0.38 -0.41 16 26 H 0.38 -1.51 8.70 45.56 0.40 -1.12 16 27 H 0.11 -0.03 7.96 -51.93 -0.41 -0.45 16 28 H -0.26 -0.51 7.11 56.52 0.40 -0.11 16 29 H -0.26 -0.26 7.11 56.52 0.40 0.14 16 30 H 0.13 -0.29 4.82 -52.48 -0.25 -0.55 16 31 H 0.13 -0.22 8.06 -52.49 -0.42 -0.65 16 32 H 0.16 0.22 8.06 -52.49 -0.42 -0.20 16 33 H 0.39 -1.30 5.92 -40.82 -0.24 -1.54 16 34 H 0.09 -0.25 8.14 -51.93 -0.42 -0.68 16 35 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 36 H 0.07 -0.26 8.14 -51.93 -0.42 -0.68 16 37 H 0.06 -0.24 6.51 -51.93 -0.34 -0.58 16 38 H 0.05 -0.11 8.14 -51.93 -0.42 -0.53 16 39 H 0.04 -0.10 8.14 -51.93 -0.42 -0.53 16 40 H 0.38 -1.49 9.12 45.56 0.42 -1.08 16 41 H 0.07 0.09 7.82 -51.93 -0.41 -0.32 16 42 H 0.06 -0.03 7.60 -51.93 -0.39 -0.42 16 43 H 0.07 0.13 8.14 -51.93 -0.42 -0.29 16 44 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 45 H 0.42 -1.49 8.12 -40.82 -0.33 -1.82 16 46 H 0.13 -0.07 8.06 -52.49 -0.42 -0.50 16 LS Contribution 368.14 15.07 5.55 5.55 Total: 0.00 -8.88 368.14 -11.09 -19.98 By element: Atomic # 1 Polarization: -7.99 SS G_CDS: -5.81 Total: -13.80 kcal Atomic # 6 Polarization: 1.67 SS G_CDS: -4.67 Total: -3.01 kcal Atomic # 7 Polarization: 1.10 SS G_CDS: -0.28 Total: 0.82 kcal Atomic # 8 Polarization: -2.74 SS G_CDS: -0.83 Total: -3.57 kcal Atomic # 14 Polarization: -0.92 SS G_CDS: -5.06 Total: -5.97 kcal Total LS contribution 5.55 Total: 5.55 kcal Total: -8.88 -11.09 -19.98 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_13158378.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -46.491 kcal (2) G-P(sol) polarization free energy of solvation -8.885 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -55.376 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.095 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.979 kcal (6) G-S(sol) free energy of system = (1) + (5) -66.470 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds