Wall clock time and date at job start Tue Mar 9 2021 14:57:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86297 * 109.46876 * 2 1 4 4 C 1.50699 * 109.47064 * 119.99823 * 2 1 3 5 5 C 1.34713 * 125.66572 * 64.99996 * 4 2 1 6 6 C 1.40972 * 107.02904 * 179.97438 * 5 4 2 7 7 C 1.35930 * 106.74078 * 0.02562 * 6 5 4 8 8 C 1.47814 * 125.92978 * 179.97438 * 7 6 5 9 9 C 1.39806 * 120.00167 * 359.97438 * 8 7 6 10 10 C 1.37810 * 120.25007 * 180.02562 * 9 8 7 11 11 C 1.38779 * 120.24076 * 359.71582 * 10 9 8 12 12 O 1.35646 * 120.00025 * 180.27804 * 11 10 9 13 13 C 1.40247 * 119.99391 * 0.55545 * 11 10 9 14 14 C 1.47564 * 120.11725 * 179.71659 * 13 11 10 15 15 O 1.21588 * 120.00255 * 359.73000 * 14 13 11 16 16 N 1.34784 * 119.99887 * 179.72949 * 14 13 11 17 17 C 1.46493 * 119.99864 * 179.72978 * 16 14 13 18 18 H 1.08999 * 109.47597 * 34.99540 * 17 16 14 19 19 C 1.52996 * 109.47222 * 155.00033 * 17 16 14 20 20 C 1.52997 * 109.47357 * 59.99623 * 19 17 16 21 21 C 1.52997 * 109.47326 * 60.00165 * 20 19 17 22 22 H 1.09003 * 109.47006 * 59.99980 * 21 20 19 23 23 C 1.52997 * 109.47656 * 180.02562 * 21 20 19 24 24 O 1.42901 * 109.47484 * 185.00234 * 23 21 20 25 25 C 1.53001 * 109.47203 * 300.00436 * 21 20 19 26 26 C 1.53000 * 109.47099 * 274.99655 * 17 16 14 27 27 C 1.39213 * 120.00551 * 179.97438 * 8 7 6 28 28 O 1.34340 * 125.66850 * 245.26968 * 4 2 1 29 29 H 0.96706 * 114.00459 * 299.99792 * 1 2 3 30 30 H 1.08992 * 109.47256 * 239.99685 * 2 1 3 31 31 H 1.48501 * 110.00234 * 299.99945 * 3 2 1 32 32 H 1.48497 * 110.00103 * 61.31793 * 3 2 1 33 33 H 1.07997 * 126.48239 * 359.97438 * 5 4 2 34 34 H 1.08000 * 126.62455 * 179.97438 * 6 5 4 35 35 H 1.08004 * 119.87454 * 359.97438 * 9 8 7 36 36 H 1.08002 * 119.87998 * 179.97438 * 10 9 8 37 37 H 0.96706 * 114.00269 * 270.28115 * 12 11 10 38 38 H 0.97000 * 119.99339 * 0.02562 * 16 14 13 39 39 H 1.08999 * 109.47829 * 179.97438 * 19 17 16 40 40 H 1.09003 * 109.47300 * 299.99847 * 19 17 16 41 41 H 1.09004 * 109.47628 * 180.02562 * 20 19 17 42 42 H 1.09003 * 109.47095 * 300.00199 * 20 19 17 43 43 H 1.09002 * 109.46940 * 304.99629 * 23 21 20 44 44 H 1.08996 * 109.47131 * 64.99790 * 23 21 20 45 45 H 0.96696 * 114.00070 * 179.97438 * 24 23 21 46 46 H 1.09003 * 109.47735 * 179.97438 * 25 21 20 47 47 H 1.09007 * 109.47181 * 299.99898 * 25 21 20 48 48 H 1.09008 * 109.47230 * 60.00254 * 26 17 16 49 49 H 1.09003 * 109.47308 * 180.02562 * 26 17 16 50 50 H 1.08006 * 120.11864 * 0.02562 * 27 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.7570 -2.0167 1.5094 6 6 2.3823 -2.2612 2.7490 7 6 2.9084 -1.0779 3.1622 8 6 3.6587 -0.8529 4.4158 9 6 3.8797 -1.9144 5.2984 10 6 4.5781 -1.7103 6.4687 11 6 5.0723 -0.4507 6.7771 12 8 5.7639 -0.2565 7.9278 13 6 4.8516 0.6226 5.9018 14 6 5.3705 1.9645 6.2301 15 8 5.9864 2.1422 7.2632 16 7 5.1617 2.9932 5.3845 17 6 5.6717 4.3265 5.7132 18 1 6.6231 4.2328 6.2368 19 6 5.8752 5.1266 4.4251 20 6 4.5397 5.2582 3.6901 21 6 3.5334 5.9824 4.5866 22 1 3.9129 6.9745 4.8312 23 6 2.1978 6.1135 3.8520 24 8 1.2944 6.8905 4.6408 25 6 3.3300 5.1824 5.8749 26 6 4.6655 5.0507 6.6097 27 6 4.1453 0.4160 4.7177 28 8 2.6229 -0.1450 2.2339 29 1 -0.3934 0.4417 0.7651 30 1 1.7923 -0.5138 -0.8899 31 1 1.5614 2.4679 -1.2085 32 1 1.5877 2.4585 1.2242 33 1 1.2367 -2.7398 0.8989 34 1 2.4327 -3.2059 3.2700 35 1 3.5009 -2.8980 5.0624 36 1 4.7450 -2.5345 7.1464 37 1 5.2110 -0.0118 8.6825 38 1 4.6701 2.8514 4.5605 39 1 6.2542 6.1189 4.6695 40 1 6.5921 4.6107 3.7863 41 1 4.6847 5.8278 2.7721 42 1 4.1603 4.2661 3.4456 43 1 2.3576 6.6053 2.8925 44 1 1.7754 5.1224 3.6864 45 1 0.4254 7.0151 4.2354 46 1 2.6133 5.6985 6.5138 47 1 2.9505 4.1902 5.6303 48 1 4.5205 4.4808 7.5276 49 1 5.0447 6.0431 6.8540 50 1 3.9754 1.2376 4.0375 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207534_13259648.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:57:19 Heat of formation + Delta-G solvation = -119.059531 kcal Electronic energy + Delta-G solvation = -35189.465081 eV Core-core repulsion = 30535.847225 eV Total energy + Delta-G solvation = -4653.617856 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.165 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -43.76009 -41.71238 -40.53126 -39.06523 -38.27125 -37.84529 -37.43589 -34.81914 -34.24699 -32.95361 -32.68466 -31.86856 -31.07604 -30.08572 -26.60415 -26.46157 -25.27568 -23.75429 -23.65652 -23.05776 -22.28437 -21.91609 -21.27616 -20.18413 -19.72070 -19.20312 -18.47446 -18.28775 -17.68664 -17.51672 -17.15822 -16.67140 -16.65225 -16.44198 -16.21563 -15.92187 -15.85377 -15.76946 -15.38052 -14.94063 -14.87232 -14.62934 -14.47669 -14.38462 -14.03116 -13.95432 -13.86075 -13.65486 -13.42315 -13.28077 -13.24310 -13.15674 -13.06036 -12.95377 -12.52121 -12.23845 -12.15100 -11.82749 -11.63025 -11.37309 -11.18012 -11.11708 -10.91488 -10.87905 -10.73429 -10.50257 -10.32501 -9.97554 -8.95588 -5.11143 -0.58891 -0.24560 0.72330 1.01761 1.37401 1.45007 1.60545 1.81362 1.95421 2.10766 2.62715 3.06214 3.08354 3.11392 3.22824 3.45700 3.53890 3.59465 3.66060 3.81992 3.84310 3.92396 3.94866 3.99446 4.12353 4.17293 4.25285 4.28692 4.34119 4.37820 4.38684 4.44932 4.53296 4.56142 4.58897 4.60955 4.68623 4.71652 4.78274 4.91368 4.96498 4.97743 5.02568 5.05264 5.09833 5.13172 5.23330 5.35758 5.36308 5.37519 5.41292 5.54944 5.91285 6.15681 6.48345 6.60943 6.65728 7.25323 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.520 6.520 2 C -0.034 4.034 3 Si 0.696 3.304 4 C -0.051 4.051 5 C -0.168 4.168 6 C -0.189 4.189 7 C 0.037 3.963 8 C -0.034 4.034 9 C -0.053 4.053 10 C -0.149 4.149 11 C 0.180 3.820 12 O -0.475 6.475 13 C -0.163 4.163 14 C 0.560 3.440 15 O -0.516 6.516 16 N -0.721 5.721 17 C 0.146 3.854 18 H 0.092 0.908 19 C -0.126 4.126 20 C -0.116 4.116 21 C -0.089 4.089 22 H 0.081 0.919 23 C 0.078 3.922 24 O -0.572 6.572 25 C -0.108 4.108 26 C -0.131 4.131 27 C -0.054 4.054 28 O -0.166 6.166 29 H 0.380 0.620 30 H 0.137 0.863 31 H -0.248 1.248 32 H -0.254 1.254 33 H 0.154 0.846 34 H 0.155 0.845 35 H 0.140 0.860 36 H 0.146 0.854 37 H 0.399 0.601 38 H 0.396 0.604 39 H 0.083 0.917 40 H 0.074 0.926 41 H 0.072 0.928 42 H 0.060 0.940 43 H 0.045 0.955 44 H 0.042 0.958 45 H 0.380 0.620 46 H 0.070 0.930 47 H 0.057 0.943 48 H 0.069 0.931 49 H 0.074 0.926 50 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.560 -0.847 -3.353 3.794 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.327 6.327 2 C -0.144 4.144 3 Si 0.595 3.405 4 C -0.101 4.101 5 C -0.187 4.187 6 C -0.208 4.208 7 C -0.013 4.013 8 C -0.035 4.035 9 C -0.072 4.072 10 C -0.167 4.167 11 C 0.133 3.867 12 O -0.287 6.287 13 C -0.167 4.167 14 C 0.347 3.653 15 O -0.392 6.392 16 N -0.375 5.375 17 C 0.042 3.958 18 H 0.110 0.890 19 C -0.164 4.164 20 C -0.154 4.154 21 C -0.107 4.107 22 H 0.100 0.900 23 C 0.000 4.000 24 O -0.377 6.377 25 C -0.146 4.146 26 C -0.170 4.170 27 C -0.073 4.073 28 O -0.064 6.064 29 H 0.228 0.772 30 H 0.155 0.845 31 H -0.172 1.172 32 H -0.178 1.178 33 H 0.172 0.828 34 H 0.172 0.828 35 H 0.158 0.842 36 H 0.164 0.836 37 H 0.258 0.742 38 H 0.233 0.767 39 H 0.102 0.898 40 H 0.093 0.907 41 H 0.091 0.909 42 H 0.078 0.922 43 H 0.064 0.936 44 H 0.061 0.939 45 H 0.227 0.773 46 H 0.089 0.911 47 H 0.076 0.924 48 H 0.088 0.912 49 H 0.093 0.907 50 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges -0.145 0.026 -3.065 3.068 hybrid contribution -2.301 -0.549 -0.079 2.367 sum -2.446 -0.523 -3.144 4.017 Atomic orbital electron populations 1.86673 1.16696 1.80124 1.49189 1.24338 0.83973 1.12142 0.93934 0.94544 0.91416 0.73477 0.81024 1.22830 1.01346 0.93816 0.92101 1.21575 1.03584 0.95683 0.97868 1.21864 1.02785 0.98485 0.97624 1.20276 1.02902 0.87407 0.90737 1.17567 1.00294 0.94183 0.91432 1.21120 0.95644 0.98382 0.92007 1.21408 0.99264 0.97386 0.98647 1.18604 0.89224 0.90838 0.88026 1.84753 1.35122 1.90980 1.17800 1.20324 1.04268 0.94405 0.97669 1.17969 0.79778 0.83704 0.83870 1.90833 1.39649 1.84190 1.24562 1.46056 1.58286 1.08886 1.24238 1.20985 0.97972 0.80931 0.95900 0.88976 1.21819 0.97442 1.01183 0.95979 1.21539 0.94856 1.00444 0.98541 1.21185 0.93454 1.00461 0.95621 0.90038 1.22236 0.90274 0.94133 0.93308 1.86480 1.27321 1.74875 1.49048 1.21483 0.97308 0.99699 0.96091 1.21942 0.95426 1.00881 0.98723 1.21275 0.94486 0.96547 0.95017 1.83917 1.58093 1.37837 1.26533 0.77179 0.84505 1.17208 1.17847 0.82799 0.82780 0.84234 0.83648 0.74165 0.76718 0.89831 0.90695 0.90946 0.92154 0.93635 0.93949 0.77341 0.91080 0.92395 0.91221 0.90740 0.84894 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 0.11 12.88 -35.23 -0.45 -0.34 16 2 C -0.03 0.05 2.98 36.01 0.11 0.16 16 3 Si 0.70 -1.44 32.11 -169.99 -5.46 -6.90 16 4 C -0.05 0.01 6.20 -35.56 -0.22 -0.21 16 5 C -0.17 0.00 10.78 -39.80 -0.43 -0.43 16 6 C -0.19 0.05 10.26 -39.37 -0.40 -0.36 16 7 C 0.04 0.01 7.03 -36.49 -0.26 -0.25 16 8 C -0.03 0.01 5.87 -105.03 -0.62 -0.61 16 9 C -0.05 0.07 9.54 -39.15 -0.37 -0.31 16 10 C -0.15 0.11 9.96 -39.54 -0.39 -0.28 16 11 C 0.18 0.23 6.72 -38.63 -0.26 -0.03 16 12 O -0.47 -0.98 11.55 -40.59 -0.47 -1.45 16 13 C -0.16 -0.21 5.88 -104.90 -0.62 -0.83 16 14 C 0.56 1.44 7.73 -12.45 -0.10 1.35 16 15 O -0.52 -3.03 14.80 -16.66 -0.25 -3.28 16 16 N -0.72 0.04 4.18 -54.84 -0.23 -0.19 16 17 C 0.15 -0.02 2.79 -67.94 -0.19 -0.21 16 18 H 0.09 0.14 7.57 -51.93 -0.39 -0.25 16 19 C -0.13 0.27 5.61 -26.73 -0.15 0.12 16 20 C -0.12 0.29 5.03 -26.73 -0.13 0.16 16 21 C -0.09 0.08 2.43 -90.62 -0.22 -0.14 16 22 H 0.08 0.00 8.14 -51.93 -0.42 -0.43 16 23 C 0.08 -0.07 6.43 37.16 0.24 0.17 16 24 O -0.57 -0.32 13.19 -35.23 -0.46 -0.79 16 25 C -0.11 -0.01 4.94 -26.73 -0.13 -0.14 16 26 C -0.13 -0.04 5.60 -26.73 -0.15 -0.19 16 27 C -0.05 0.01 9.20 -38.78 -0.36 -0.35 16 28 O -0.17 -0.05 8.80 4.59 0.04 -0.01 16 29 H 0.38 -1.11 8.70 45.56 0.40 -0.71 16 30 H 0.14 -0.38 7.96 -51.93 -0.41 -0.79 16 31 H -0.25 -0.14 7.11 56.52 0.40 0.26 16 32 H -0.25 0.03 7.11 56.52 0.40 0.43 16 33 H 0.15 -0.15 8.06 -52.49 -0.42 -0.58 16 34 H 0.15 -0.36 7.24 -52.49 -0.38 -0.74 16 35 H 0.14 -0.49 6.96 -52.48 -0.37 -0.85 16 36 H 0.15 -0.37 8.06 -52.49 -0.42 -0.79 16 37 H 0.40 -0.64 9.06 45.56 0.41 -0.23 16 38 H 0.40 -0.76 4.89 -40.82 -0.20 -0.96 16 39 H 0.08 -0.20 8.14 -51.93 -0.42 -0.63 16 40 H 0.07 -0.18 8.14 -51.93 -0.42 -0.61 16 41 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 42 H 0.06 -0.19 6.50 -51.93 -0.34 -0.52 16 43 H 0.05 -0.08 8.14 -51.93 -0.42 -0.50 16 44 H 0.04 -0.05 8.14 -51.93 -0.42 -0.47 16 45 H 0.38 -1.26 9.12 45.56 0.42 -0.85 16 46 H 0.07 0.12 7.82 -51.93 -0.41 -0.29 16 47 H 0.06 0.02 7.60 -51.92 -0.39 -0.38 16 48 H 0.07 0.15 8.14 -51.92 -0.42 -0.27 16 49 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 50 H 0.13 -0.25 6.24 -52.48 -0.33 -0.58 16 LS Contribution 407.63 15.07 6.14 6.14 Total: 0.00 -9.80 407.63 -11.21 -21.00 By element: Atomic # 1 Polarization: -6.39 SS G_CDS: -5.42 Total: -11.81 kcal Atomic # 6 Polarization: 2.27 SS G_CDS: -4.65 Total: -2.39 kcal Atomic # 7 Polarization: 0.04 SS G_CDS: -0.23 Total: -0.19 kcal Atomic # 8 Polarization: -4.27 SS G_CDS: -1.59 Total: -5.86 kcal Atomic # 14 Polarization: -1.44 SS G_CDS: -5.46 Total: -6.90 kcal Total LS contribution 6.14 Total: 6.14 kcal Total: -9.80 -11.21 -21.00 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_13259648.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -98.055 kcal (2) G-P(sol) polarization free energy of solvation -9.795 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -107.851 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.209 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.004 kcal (6) G-S(sol) free energy of system = (1) + (5) -119.060 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds