Wall clock time and date at job start Tue Mar 9 2021 14:58:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86298 * 109.47295 * 2 1 4 4 C 1.50698 * 109.47331 * 239.99680 * 2 1 3 5 5 C 1.31115 * 118.54682 * 119.99802 * 4 2 1 6 6 N 1.38927 * 121.84635 * 180.40502 * 5 4 2 7 7 C 1.47027 * 118.88522 * 346.71509 * 6 5 4 8 8 C 1.50703 * 109.81940 * 163.20336 * 7 6 5 9 9 O 1.21282 * 120.00078 * 341.78469 * 8 7 6 10 10 N 1.34773 * 119.99744 * 161.79242 * 8 7 6 11 11 C 1.46502 * 119.99750 * 179.97438 * 10 8 7 12 12 H 1.08993 * 109.47372 * 34.99984 * 11 10 8 13 13 C 1.53003 * 109.47049 * 154.99932 * 11 10 8 14 14 C 1.52996 * 109.47451 * 59.99854 * 13 11 10 15 15 C 1.53007 * 109.46925 * 59.99745 * 14 13 11 16 16 H 1.09002 * 109.46743 * 60.00723 * 15 14 13 17 17 C 1.52996 * 109.46925 * 180.02562 * 15 14 13 18 18 O 1.42903 * 109.47140 * 185.00386 * 17 15 14 19 19 C 1.52991 * 109.47397 * 300.00159 * 15 14 13 20 20 C 1.52998 * 109.47264 * 274.99732 * 11 10 8 21 21 C 1.53537 * 107.66105 * 43.66155 * 7 6 5 22 22 C 1.50630 * 118.46961 * 300.08930 * 4 2 1 23 23 H 0.96704 * 113.99597 * 60.00012 * 1 2 3 24 24 H 1.09009 * 109.46949 * 119.99783 * 2 1 3 25 25 H 1.48503 * 110.00074 * 60.00123 * 3 2 1 26 26 H 1.48504 * 110.00065 * 181.31844 * 3 2 1 27 27 H 1.07998 * 119.07771 * 0.43908 * 5 4 2 28 28 H 0.97002 * 120.55253 * 166.73458 * 6 5 4 29 29 H 1.08999 * 109.82114 * 284.11975 * 7 6 5 30 30 H 0.97000 * 120.00428 * 359.97438 * 10 8 7 31 31 H 1.09005 * 109.47045 * 179.97438 * 13 11 10 32 32 H 1.09006 * 109.47138 * 299.99675 * 13 11 10 33 33 H 1.08999 * 109.47496 * 179.97438 * 14 13 11 34 34 H 1.08997 * 109.47283 * 300.00566 * 14 13 11 35 35 H 1.08998 * 109.47522 * 305.00170 * 17 15 14 36 36 H 1.09001 * 109.47334 * 65.00692 * 17 15 14 37 37 H 0.96701 * 113.99937 * 180.02562 * 18 17 15 38 38 H 1.08997 * 109.47483 * 179.97438 * 19 15 14 39 39 H 1.08994 * 109.47561 * 300.00319 * 19 15 14 40 40 H 1.08994 * 109.47156 * 59.99972 * 20 11 10 41 41 H 1.09005 * 109.47427 * 180.02562 * 20 11 10 42 42 H 1.09002 * 109.62272 * 58.77362 * 21 7 6 43 43 H 1.09001 * 109.62157 * 179.14540 * 21 7 6 44 44 H 1.08996 * 109.57584 * 39.73121 * 22 4 2 45 45 H 1.09000 * 109.30408 * 280.11028 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 2.6832 -0.0461 -2.0745 6 7 3.1764 -0.6309 -3.2341 7 6 3.1009 -2.0919 -3.3803 8 6 3.2949 -2.4715 -4.8258 9 8 3.1499 -1.6393 -5.6961 10 7 3.6295 -3.7358 -5.1514 11 6 3.8176 -4.1050 -6.5566 12 1 4.2563 -3.2663 -7.0970 13 6 4.7514 -5.3137 -6.6457 14 6 4.1357 -6.4910 -5.8872 15 6 2.7823 -6.8453 -6.5069 16 1 2.9223 -7.1200 -7.5524 17 6 2.1663 -8.0222 -5.7480 18 8 0.9596 -8.4283 -6.3968 19 6 1.8485 -5.6367 -6.4177 20 6 2.4643 -4.4592 -7.1764 21 6 1.7092 -2.5360 -2.9077 22 6 1.5449 -2.1518 -1.4354 23 1 -0.3933 0.4417 -0.7651 24 1 1.7924 -0.5138 0.8901 25 1 1.5616 2.4679 1.2085 26 1 3.5347 1.7702 -0.0321 27 1 2.9262 0.9846 -1.8621 28 1 3.5644 -0.0844 -3.9354 29 1 3.8679 -2.5649 -2.7671 30 1 3.7457 -4.4013 -4.4554 31 1 4.8910 -5.5886 -7.6913 32 1 5.7156 -5.0613 -6.2042 33 1 4.8007 -7.3523 -5.9511 34 1 3.9956 -6.2164 -4.8417 35 1 2.8698 -8.8547 -5.7353 36 1 1.9442 -7.7186 -4.7249 37 1 0.5137 -9.1718 -5.9686 38 1 0.8846 -5.8889 -6.8596 39 1 1.7086 -5.3620 -5.3723 40 1 1.7991 -3.5982 -7.1128 41 1 2.6043 -4.7344 -8.2218 42 1 0.9442 -2.0382 -3.5035 43 1 1.6130 -3.6162 -3.0170 44 1 0.5063 -2.2972 -1.1384 45 1 2.1850 -2.7871 -0.8232 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207534_15413834.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:58:03 Heat of formation + Delta-G solvation = -109.541676 kcal Electronic energy + Delta-G solvation = -25301.009829 eV Core-core repulsion = 21705.336254 eV Total energy + Delta-G solvation = -3595.673574 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 297.177 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -41.67386 -40.28767 -39.12870 -37.60872 -37.21338 -34.90206 -33.19739 -33.13788 -31.92602 -31.43646 -27.64923 -26.34929 -25.32662 -23.83664 -23.74509 -22.39009 -21.97634 -20.28297 -19.42467 -19.17129 -18.30937 -18.06692 -17.13846 -16.87028 -16.50247 -16.24277 -15.89952 -15.88839 -15.71969 -15.33177 -15.21234 -14.89948 -14.85055 -14.43243 -14.14010 -13.97226 -13.86528 -13.50910 -13.29406 -13.13118 -13.10949 -12.87513 -12.56415 -12.28266 -12.08733 -11.92570 -11.72349 -11.66817 -11.42599 -11.31549 -11.21382 -10.93295 -10.78730 -10.16646 -10.11894 -8.45554 -4.97102 1.33696 1.43740 1.51690 1.66836 1.88124 2.05415 2.61853 3.09761 3.45253 3.55972 3.60869 3.66683 3.72933 3.78460 3.84201 3.92656 3.98326 4.12408 4.26274 4.29027 4.31676 4.33693 4.36972 4.40816 4.49911 4.56013 4.57107 4.63696 4.65363 4.75058 4.86345 4.92923 4.98532 5.00781 5.02235 5.16289 5.18674 5.27380 5.32432 5.33586 5.45258 5.55661 6.21357 6.40087 6.61179 6.76332 6.83845 7.09810 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.043 4.043 3 Si 0.672 3.328 4 C -0.281 4.281 5 C 0.141 3.859 6 N -0.732 5.732 7 C 0.136 3.864 8 C 0.513 3.487 9 O -0.530 6.530 10 N -0.718 5.718 11 C 0.145 3.855 12 H 0.090 0.910 13 C -0.126 4.126 14 C -0.115 4.115 15 C -0.089 4.089 16 H 0.080 0.920 17 C 0.079 3.921 18 O -0.573 6.573 19 C -0.108 4.108 20 C -0.132 4.132 21 C -0.125 4.125 22 C -0.053 4.053 23 H 0.376 0.624 24 H 0.102 0.898 25 H -0.258 1.258 26 H -0.262 1.262 27 H 0.132 0.868 28 H 0.409 0.591 29 H 0.088 0.912 30 H 0.400 0.600 31 H 0.083 0.917 32 H 0.073 0.927 33 H 0.071 0.929 34 H 0.061 0.939 35 H 0.045 0.955 36 H 0.044 0.956 37 H 0.381 0.619 38 H 0.071 0.929 39 H 0.059 0.941 40 H 0.069 0.931 41 H 0.074 0.926 42 H 0.077 0.923 43 H 0.076 0.924 44 H 0.081 0.919 45 H 0.062 0.938 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.780 -3.550 -0.377 3.989 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.155 4.155 3 Si 0.575 3.425 4 C -0.292 4.292 5 C 0.021 3.979 6 N -0.365 5.365 7 C 0.026 3.974 8 C 0.298 3.702 9 O -0.406 6.406 10 N -0.371 5.371 11 C 0.041 3.959 12 H 0.108 0.892 13 C -0.164 4.164 14 C -0.153 4.153 15 C -0.108 4.108 16 H 0.098 0.902 17 C 0.001 3.999 18 O -0.378 6.378 19 C -0.145 4.145 20 C -0.170 4.170 21 C -0.163 4.163 22 C -0.090 4.090 23 H 0.223 0.777 24 H 0.120 0.880 25 H -0.183 1.183 26 H -0.188 1.188 27 H 0.149 0.851 28 H 0.246 0.754 29 H 0.105 0.895 30 H 0.236 0.764 31 H 0.101 0.899 32 H 0.091 0.909 33 H 0.089 0.911 34 H 0.080 0.920 35 H 0.063 0.937 36 H 0.063 0.937 37 H 0.228 0.772 38 H 0.090 0.910 39 H 0.077 0.923 40 H 0.088 0.912 41 H 0.092 0.908 42 H 0.096 0.904 43 H 0.094 0.906 44 H 0.099 0.901 45 H 0.081 0.919 Dipole moment (debyes) X Y Z Total from point charges 2.425 -2.294 -0.439 3.367 hybrid contribution 0.273 -1.225 0.694 1.434 sum 2.698 -3.519 0.256 4.442 Atomic orbital electron populations 1.86462 1.17889 1.81639 1.49117 1.24662 0.84742 1.08294 0.97782 0.95076 0.80664 0.79292 0.87430 1.21034 1.08251 0.98673 1.01233 1.20344 0.94062 0.96320 0.87171 1.44261 1.68111 1.04531 1.19579 1.20990 0.99508 0.84021 0.92863 1.20577 0.76267 0.82484 0.90867 1.90733 1.49818 1.49655 1.50356 1.46072 1.70989 1.10890 1.09179 1.20998 0.95910 0.97508 0.81455 0.89191 1.21817 0.98308 0.94006 1.02276 1.21525 0.95950 0.98478 0.99299 1.21188 0.94427 0.94344 1.00812 0.90155 1.22226 0.86242 0.96291 0.95138 1.86480 1.39157 1.55221 1.56957 1.21475 0.98927 0.93541 1.00567 1.21940 0.96459 0.98747 0.99874 1.21850 0.95057 1.01362 0.98069 1.20006 1.02241 0.92620 0.94129 0.77687 0.88020 1.18290 1.18750 0.85104 0.75373 0.89481 0.76446 0.89886 0.90863 0.91071 0.91999 0.93665 0.93743 0.77244 0.91028 0.92254 0.91221 0.90788 0.90405 0.90556 0.90079 0.91937 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.55 12.55 -35.23 -0.44 -1.00 16 2 C -0.04 -0.02 2.83 36.00 0.10 0.09 16 3 Si 0.67 -0.25 29.68 -169.99 -5.05 -5.30 16 4 C -0.28 -0.03 5.46 -101.13 -0.55 -0.58 16 5 C 0.14 -0.03 9.63 -16.08 -0.15 -0.19 16 6 N -0.73 -0.06 5.47 -55.34 -0.30 -0.37 16 7 C 0.14 -0.10 3.36 -68.52 -0.23 -0.33 16 8 C 0.51 0.25 7.06 -10.99 -0.08 0.18 16 9 O -0.53 -2.24 15.72 5.56 0.09 -2.16 16 10 N -0.72 1.31 4.23 -53.81 -0.23 1.08 16 11 C 0.15 -0.18 2.78 -67.93 -0.19 -0.37 16 12 H 0.09 0.05 7.58 -51.93 -0.39 -0.35 16 13 C -0.13 0.37 5.61 -26.73 -0.15 0.22 16 14 C -0.11 0.38 5.03 -26.73 -0.13 0.25 16 15 C -0.09 0.15 2.43 -90.62 -0.22 -0.07 16 16 H 0.08 -0.04 8.14 -51.93 -0.42 -0.47 16 17 C 0.08 -0.14 6.43 37.16 0.24 0.10 16 18 O -0.57 0.05 13.19 -35.23 -0.46 -0.41 16 19 C -0.11 0.09 4.94 -26.73 -0.13 -0.05 16 20 C -0.13 0.05 5.60 -26.73 -0.15 -0.09 16 21 C -0.12 0.13 5.46 -26.43 -0.14 -0.01 16 22 C -0.05 0.02 5.86 -27.90 -0.16 -0.15 16 23 H 0.38 -0.97 8.70 45.56 0.40 -0.57 16 24 H 0.10 0.11 7.96 -51.92 -0.41 -0.30 16 25 H -0.26 -0.81 7.11 56.52 0.40 -0.41 16 26 H -0.26 -0.48 7.10 56.52 0.40 -0.08 16 27 H 0.13 -0.21 4.36 -52.49 -0.23 -0.44 16 28 H 0.41 0.10 8.08 -40.82 -0.33 -0.23 16 29 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 30 H 0.40 -1.56 6.87 -40.82 -0.28 -1.84 16 31 H 0.08 -0.24 8.14 -51.93 -0.42 -0.67 16 32 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 33 H 0.07 -0.25 8.14 -51.93 -0.42 -0.68 16 34 H 0.06 -0.26 6.51 -51.93 -0.34 -0.60 16 35 H 0.05 -0.11 8.14 -51.93 -0.42 -0.53 16 36 H 0.04 -0.11 8.14 -51.93 -0.42 -0.54 16 37 H 0.38 -1.52 9.12 45.56 0.42 -1.11 16 38 H 0.07 0.07 7.82 -51.93 -0.41 -0.34 16 39 H 0.06 -0.06 7.60 -51.93 -0.39 -0.46 16 40 H 0.07 0.11 8.14 -51.93 -0.42 -0.31 16 41 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 42 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 43 H 0.08 -0.19 8.14 -51.93 -0.42 -0.62 16 44 H 0.08 0.03 7.84 -51.93 -0.41 -0.38 16 45 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 LS Contribution 347.68 15.07 5.24 5.24 Total: 0.00 -7.61 347.68 -9.76 -17.38 By element: Atomic # 1 Polarization: -6.81 SS G_CDS: -6.65 Total: -13.46 kcal Atomic # 6 Polarization: 0.95 SS G_CDS: -1.96 Total: -1.01 kcal Atomic # 7 Polarization: 1.24 SS G_CDS: -0.53 Total: 0.71 kcal Atomic # 8 Polarization: -2.75 SS G_CDS: -0.82 Total: -3.57 kcal Atomic # 14 Polarization: -0.25 SS G_CDS: -5.05 Total: -5.30 kcal Total LS contribution 5.24 Total: 5.24 kcal Total: -7.61 -9.76 -17.38 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_15413834.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -92.165 kcal (2) G-P(sol) polarization free energy of solvation -7.612 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -99.777 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.764 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.376 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.542 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds