Wall clock time and date at job start Tue Mar 9 2021 14:58:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86308 * 109.46999 * 2 1 4 4 C 1.50696 * 109.47075 * 119.99967 * 2 1 3 5 5 C 1.31116 * 118.54768 * 259.21891 * 4 2 1 6 6 N 1.38925 * 121.84975 * 179.57593 * 5 4 2 7 7 C 1.47027 * 118.88474 * 13.33157 * 6 5 4 8 8 C 1.53534 * 107.64915 * 316.32402 * 7 6 5 9 9 C 1.50201 * 118.54785 * 79.19770 * 4 2 1 10 10 C 1.50704 * 109.32979 * 320.30883 * 9 4 2 11 11 O 1.21277 * 120.00035 * 274.25739 * 10 9 4 12 12 N 1.34776 * 119.99678 * 94.25278 * 10 9 4 13 13 C 1.46500 * 119.99983 * 184.84308 * 12 10 9 14 14 H 1.09006 * 109.46940 * 319.53209 * 13 12 10 15 15 C 1.52998 * 109.47262 * 79.52666 * 13 12 10 16 16 C 1.53004 * 109.46838 * 60.00409 * 15 13 12 17 17 C 1.53001 * 109.47291 * 60.00022 * 16 15 13 18 18 H 1.08999 * 109.47236 * 59.99691 * 17 16 15 19 19 C 1.53001 * 109.46933 * 179.97438 * 17 16 15 20 20 O 1.42895 * 109.47333 * 294.99950 * 19 17 16 21 21 C 1.52993 * 109.46838 * 299.99784 * 17 16 15 22 22 C 1.53001 * 109.47320 * 199.52921 * 13 12 10 23 23 H 0.96700 * 113.99803 * 300.00402 * 1 2 3 24 24 H 1.08998 * 109.47179 * 240.00292 * 2 1 3 25 25 H 1.48498 * 109.99469 * 178.68255 * 3 2 1 26 26 H 1.48503 * 109.99736 * 299.99772 * 3 2 1 27 27 H 1.08007 * 119.07569 * 359.59551 * 5 4 2 28 28 H 0.97003 * 120.55481 * 193.36148 * 6 5 4 29 29 H 1.09003 * 109.81885 * 75.88095 * 7 6 5 30 30 H 1.08994 * 109.82092 * 196.79855 * 7 6 5 31 31 H 1.08991 * 109.60278 * 301.22439 * 8 7 6 32 32 H 1.09006 * 109.62471 * 180.67978 * 8 7 6 33 33 H 1.09002 * 109.32983 * 79.96046 * 9 4 2 34 34 H 0.97005 * 120.00051 * 4.84001 * 12 10 9 35 35 H 1.08999 * 109.47380 * 179.97438 * 15 13 12 36 36 H 1.08994 * 109.47307 * 300.00402 * 15 13 12 37 37 H 1.08999 * 109.47233 * 299.99711 * 16 15 13 38 38 H 1.09003 * 109.47125 * 180.02562 * 16 15 13 39 39 H 1.09008 * 109.47128 * 55.00085 * 19 17 16 40 40 H 1.08999 * 109.46796 * 174.99308 * 19 17 16 41 41 H 0.96702 * 114.00169 * 180.02562 * 20 19 17 42 42 H 1.09003 * 109.47082 * 179.97438 * 21 17 16 43 43 H 1.08999 * 109.47538 * 300.00324 * 21 17 16 44 44 H 1.08999 * 109.47236 * 179.97438 * 22 13 12 45 45 H 1.09002 * 109.46771 * 59.99700 * 22 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.3433 0.0100 2.2456 6 7 2.8116 -0.5732 3.4163 7 6 3.1254 -2.0096 3.4180 8 6 1.9925 -2.7344 2.6774 9 6 1.9375 -2.2124 1.2399 10 6 0.6856 -2.7205 0.5723 11 8 -0.3353 -2.8478 1.2145 12 7 0.7005 -3.0334 -0.7386 13 6 -0.5399 -3.4257 -1.4122 14 1 -1.1213 -4.0725 -0.7550 15 6 -1.3550 -2.1754 -1.7487 16 6 -0.5389 -1.2676 -2.6711 17 6 -0.2032 -2.0199 -3.9604 18 1 -1.1260 -2.3118 -4.4616 19 6 0.6124 -1.1118 -4.8830 20 8 -0.1905 -0.0023 -5.2908 21 6 0.6119 -3.2701 -3.6239 22 6 -0.2042 -4.1780 -2.7015 23 1 -0.3933 0.4418 0.7650 24 1 1.7924 -0.5138 -0.8900 25 1 3.5346 1.7703 0.0321 26 1 1.5615 2.4679 -1.2086 27 1 2.3176 1.0871 2.1696 28 1 2.9292 -0.0418 4.2192 29 1 4.0719 -2.1818 2.9055 30 1 3.1882 -2.3730 4.4436 31 1 1.0438 -2.5354 3.1758 32 1 2.1872 -3.8069 2.6701 33 1 2.8093 -2.5731 0.6940 34 1 1.5326 -2.9989 -1.2360 35 1 -2.2776 -2.4673 -2.2503 36 1 -1.5941 -1.6395 -0.8302 37 1 0.3840 -0.9757 -2.1700 38 1 -1.1193 -0.3766 -2.9105 39 1 1.4913 -0.7480 -4.3506 40 1 0.9271 -1.6750 -5.7616 41 1 0.2633 0.6164 -5.8793 42 1 0.8507 -3.8063 -4.5424 43 1 1.5348 -2.9783 -3.1227 44 1 -1.1271 -4.4703 -3.2024 45 1 0.3765 -5.0687 -2.4617 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207534_15608500.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:58:05 Heat of formation + Delta-G solvation = -106.928526 kcal Electronic energy + Delta-G solvation = -26843.246217 eV Core-core repulsion = 23247.685958 eV Total energy + Delta-G solvation = -3595.560260 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 297.177 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -41.49407 -40.09222 -38.74439 -37.41542 -37.26519 -34.50447 -33.46953 -32.69703 -31.61533 -31.20324 -27.26815 -26.49241 -25.57169 -23.57015 -23.16484 -22.20869 -21.73761 -19.95585 -19.25193 -18.97601 -18.18852 -17.98814 -17.21665 -16.67696 -16.55820 -16.19229 -15.72780 -15.69689 -15.42189 -15.12184 -14.92173 -14.70688 -14.40663 -14.29740 -13.97981 -13.88099 -13.71259 -13.24419 -13.19026 -12.97922 -12.87046 -12.61008 -12.38131 -12.13506 -12.01154 -11.93184 -11.71041 -11.41064 -11.33538 -11.12450 -11.00550 -10.71548 -10.39019 -10.08667 -9.67905 -8.48707 -5.00702 1.27593 1.40709 1.67524 2.03573 2.10215 2.46967 2.55742 3.24662 3.63902 3.73157 3.78079 3.79937 3.84865 3.98562 4.03135 4.14533 4.18020 4.32502 4.36471 4.42124 4.42887 4.50669 4.52927 4.56431 4.63032 4.66233 4.71848 4.76008 4.76798 4.81931 4.89430 5.05107 5.17770 5.19253 5.24338 5.30369 5.33236 5.44227 5.62560 5.64281 5.74449 5.88089 6.26102 6.72100 6.77043 6.81113 6.84921 7.61239 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.042 4.042 3 Si 0.663 3.337 4 C -0.274 4.274 5 C 0.156 3.844 6 N -0.749 5.749 7 C 0.122 3.878 8 C -0.125 4.125 9 C -0.038 4.038 10 C 0.539 3.461 11 O -0.535 6.535 12 N -0.722 5.722 13 C 0.150 3.850 14 H 0.081 0.919 15 C -0.124 4.124 16 C -0.097 4.097 17 C -0.093 4.093 18 H 0.076 0.924 19 C 0.080 3.920 20 O -0.571 6.571 21 C -0.112 4.112 22 C -0.126 4.126 23 H 0.373 0.627 24 H 0.100 0.900 25 H -0.261 1.261 26 H -0.257 1.257 27 H 0.133 0.867 28 H 0.403 0.597 29 H 0.060 0.940 30 H 0.082 0.918 31 H 0.086 0.914 32 H 0.075 0.925 33 H 0.079 0.921 34 H 0.392 0.608 35 H 0.060 0.940 36 H 0.082 0.918 37 H 0.067 0.933 38 H 0.064 0.936 39 H 0.040 0.960 40 H 0.042 0.958 41 H 0.378 0.622 42 H 0.066 0.934 43 H 0.059 0.941 44 H 0.079 0.921 45 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.682 0.752 1.299 4.917 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.155 4.155 3 Si 0.566 3.434 4 C -0.285 4.285 5 C 0.034 3.966 6 N -0.379 5.379 7 C -0.003 4.003 8 C -0.164 4.164 9 C -0.060 4.060 10 C 0.326 3.674 11 O -0.411 6.411 12 N -0.374 5.374 13 C 0.045 3.955 14 H 0.099 0.901 15 C -0.163 4.163 16 C -0.135 4.135 17 C -0.111 4.111 18 H 0.095 0.905 19 C 0.002 3.998 20 O -0.376 6.376 21 C -0.150 4.150 22 C -0.164 4.164 23 H 0.220 0.780 24 H 0.117 0.883 25 H -0.186 1.186 26 H -0.181 1.181 27 H 0.150 0.850 28 H 0.238 0.762 29 H 0.078 0.922 30 H 0.101 0.899 31 H 0.105 0.895 32 H 0.093 0.907 33 H 0.097 0.903 34 H 0.227 0.773 35 H 0.078 0.922 36 H 0.101 0.899 37 H 0.085 0.915 38 H 0.083 0.917 39 H 0.059 0.941 40 H 0.061 0.939 41 H 0.225 0.775 42 H 0.085 0.915 43 H 0.078 0.922 44 H 0.097 0.903 45 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges 4.098 0.502 1.135 4.282 hybrid contribution 1.149 -0.065 -0.672 1.332 sum 5.246 0.436 0.464 5.285 Atomic orbital electron populations 1.86571 1.16878 1.81469 1.48625 1.24629 0.85658 1.08012 0.97176 0.95290 0.80826 0.79260 0.88005 1.20501 1.15133 0.93644 0.99192 1.20297 0.93793 0.95847 0.86631 1.44552 1.72864 1.09153 1.11357 1.21595 0.97025 0.80614 1.01045 1.21799 1.00618 0.99655 0.94346 1.19642 0.95967 0.93363 0.96991 1.20168 0.89867 0.75868 0.81536 1.90659 1.33870 1.52590 1.64005 1.46080 1.11060 1.70279 1.09974 1.20875 0.85776 0.96048 0.92780 0.90063 1.21847 0.97613 0.96061 1.00744 1.21401 1.00941 0.97860 0.93259 1.21248 0.99077 0.94270 0.96520 0.90524 1.22225 0.93007 0.87686 0.96844 1.86498 1.43231 1.37858 1.70002 1.21492 0.98249 0.95681 0.99569 1.21803 1.01353 0.98000 0.95235 0.78029 0.88260 1.18645 1.18149 0.84977 0.76230 0.92226 0.89947 0.89491 0.90683 0.90325 0.77329 0.92152 0.89935 0.91470 0.91692 0.94122 0.93926 0.77539 0.91533 0.92237 0.90251 0.91241 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.33 8.98 -35.23 -0.32 -0.65 16 2 C -0.04 0.01 1.81 36.00 0.07 0.08 16 3 Si 0.66 -0.54 29.86 -169.99 -5.08 -5.61 16 4 C -0.27 0.08 4.99 -101.34 -0.51 -0.42 16 5 C 0.16 -0.23 9.61 -16.08 -0.15 -0.38 16 6 N -0.75 1.54 5.83 -60.69 -0.35 1.18 16 7 C 0.12 -0.24 7.16 -3.48 -0.02 -0.26 16 8 C -0.13 0.00 5.30 -26.44 -0.14 -0.14 16 9 C -0.04 -0.01 2.70 -93.14 -0.25 -0.26 16 10 C 0.54 1.30 4.90 -10.98 -0.05 1.25 16 11 O -0.54 -3.38 15.66 5.56 0.09 -3.29 16 12 N -0.72 -0.41 4.24 -53.80 -0.23 -0.63 16 13 C 0.15 0.18 2.76 -67.93 -0.19 -0.01 16 14 H 0.08 0.25 7.69 -51.93 -0.40 -0.15 16 15 C -0.12 -0.27 5.32 -26.73 -0.14 -0.41 16 16 C -0.10 -0.18 4.32 -26.73 -0.12 -0.29 16 17 C -0.09 -0.06 2.43 -90.62 -0.22 -0.28 16 18 H 0.08 0.14 8.14 -51.93 -0.42 -0.29 16 19 C 0.08 0.04 6.43 37.16 0.24 0.28 16 20 O -0.57 -1.10 13.19 -35.23 -0.46 -1.57 16 21 C -0.11 0.12 5.03 -26.73 -0.13 -0.01 16 22 C -0.13 0.09 5.59 -26.73 -0.15 -0.06 16 23 H 0.37 -0.61 8.70 45.56 0.40 -0.21 16 24 H 0.10 0.02 6.63 -51.93 -0.34 -0.32 16 25 H -0.26 -0.44 7.11 56.52 0.40 -0.04 16 26 H -0.26 -0.75 7.11 56.52 0.40 -0.35 16 27 H 0.13 -0.48 4.79 -52.48 -0.25 -0.73 16 28 H 0.40 -1.58 8.96 -40.82 -0.37 -1.95 16 29 H 0.06 -0.12 8.14 -51.93 -0.42 -0.55 16 30 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 31 H 0.09 0.21 7.50 -51.93 -0.39 -0.18 16 32 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 33 H 0.08 -0.07 8.09 -51.93 -0.42 -0.49 16 34 H 0.39 -0.45 6.86 -40.82 -0.28 -0.73 16 35 H 0.06 0.13 8.14 -51.93 -0.42 -0.29 16 36 H 0.08 0.36 6.86 -51.93 -0.36 0.00 16 37 H 0.07 0.13 4.89 -51.93 -0.25 -0.13 16 38 H 0.06 0.26 7.82 -51.93 -0.41 -0.14 16 39 H 0.04 0.00 8.14 -51.92 -0.42 -0.43 16 40 H 0.04 -0.02 8.14 -51.93 -0.42 -0.45 16 41 H 0.38 -0.80 9.12 45.56 0.42 -0.38 16 42 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 43 H 0.06 -0.10 6.55 -51.93 -0.34 -0.44 16 44 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 45 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 LS Contribution 336.19 15.07 5.07 5.07 Total: 0.00 -7.87 336.19 -9.48 -17.35 By element: Atomic # 1 Polarization: -4.49 SS G_CDS: -6.42 Total: -10.91 kcal Atomic # 6 Polarization: 0.84 SS G_CDS: -1.77 Total: -0.93 kcal Atomic # 7 Polarization: 1.13 SS G_CDS: -0.58 Total: 0.55 kcal Atomic # 8 Polarization: -4.81 SS G_CDS: -0.69 Total: -5.51 kcal Atomic # 14 Polarization: -0.54 SS G_CDS: -5.08 Total: -5.61 kcal Total LS contribution 5.07 Total: 5.07 kcal Total: -7.87 -9.48 -17.35 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_15608500.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -89.583 kcal (2) G-P(sol) polarization free energy of solvation -7.866 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -97.449 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.480 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.346 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.929 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds