Wall clock time and date at job start Tue Mar 9 2021 14:58:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86305 * 109.46832 * 2 1 4 4 C 1.50700 * 109.47064 * 119.99802 * 2 1 3 5 5 C 1.34498 * 125.49014 * 210.28831 * 4 2 1 6 6 C 1.46753 * 106.36185 * 180.12205 * 5 4 2 7 7 C 1.47264 * 126.96926 * 179.87666 * 6 5 4 8 8 O 1.21625 * 119.99877 * 179.68384 * 7 6 5 9 9 N 1.34777 * 119.99880 * 359.69361 * 7 6 5 10 10 C 1.46500 * 119.99995 * 179.97438 * 9 7 6 11 11 H 1.09001 * 109.46596 * 324.99417 * 10 9 7 12 12 C 1.52997 * 109.47473 * 84.99514 * 10 9 7 13 13 C 1.52999 * 109.46991 * 59.99688 * 12 10 9 14 14 C 1.53006 * 109.46626 * 60.00378 * 13 12 10 15 15 H 1.09001 * 109.46801 * 59.99811 * 14 13 12 16 16 C 1.52999 * 109.46623 * 179.97438 * 14 13 12 17 17 O 1.42903 * 109.46930 * 184.99924 * 16 14 13 18 18 C 1.52997 * 109.47127 * 299.99539 * 14 13 12 19 19 C 1.52996 * 109.47249 * 204.99819 * 10 9 7 20 20 C 1.36331 * 106.06307 * 359.62012 * 6 5 4 21 21 C 1.50999 * 126.79465 * 180.24667 * 20 6 5 22 22 C 1.53398 * 108.25399 * 164.33061 * 21 20 6 23 23 C 1.53163 * 109.04731 * 48.45702 * 22 21 20 24 24 C 1.53127 * 109.52195 * 290.42819 * 23 22 21 25 25 N 1.35223 * 108.66016 * 0.24872 * 20 6 5 26 26 H 0.96698 * 113.99918 * 59.99821 * 1 2 3 27 27 H 1.08994 * 109.47084 * 240.00365 * 2 1 3 28 28 H 1.48495 * 110.00133 * 60.00236 * 3 2 1 29 29 H 1.48501 * 110.00010 * 181.31923 * 3 2 1 30 30 H 1.07999 * 126.82134 * 359.97438 * 5 4 2 31 31 H 0.96995 * 120.00034 * 359.97438 * 9 7 6 32 32 H 1.09002 * 109.47153 * 300.00243 * 12 10 9 33 33 H 1.08993 * 109.47194 * 180.02562 * 12 10 9 34 34 H 1.08993 * 109.47839 * 300.00447 * 13 12 10 35 35 H 1.09000 * 109.47160 * 180.02562 * 13 12 10 36 36 H 1.08994 * 109.47465 * 305.00017 * 16 14 13 37 37 H 1.08998 * 109.47565 * 65.00449 * 16 14 13 38 38 H 0.96703 * 114.00236 * 180.02562 * 17 16 14 39 39 H 1.09002 * 109.47153 * 180.02562 * 18 14 13 40 40 H 1.08996 * 109.46952 * 300.00302 * 18 14 13 41 41 H 1.08996 * 109.47452 * 179.97438 * 19 10 9 42 42 H 1.09000 * 109.47054 * 59.99646 * 19 10 9 43 43 H 1.08999 * 109.70512 * 284.01686 * 21 20 6 44 44 H 1.08991 * 109.70468 * 44.59904 * 21 20 6 45 45 H 1.09007 * 109.53933 * 168.32361 * 22 21 20 46 46 H 1.08997 * 109.54090 * 288.49966 * 22 21 20 47 47 H 1.08995 * 109.46241 * 50.44553 * 23 22 21 48 48 H 1.08995 * 109.46246 * 170.42077 * 23 22 21 49 49 H 1.09006 * 109.56445 * 170.83776 * 24 23 22 50 50 H 1.09005 * 109.56544 * 291.17304 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 3.0832 -0.4425 1.8712 6 6 3.1553 -1.3773 3.0002 7 6 4.2331 -1.4789 3.9985 8 8 4.1599 -2.3021 4.8908 9 7 5.3006 -0.6595 3.9234 10 6 6.3726 -0.7602 4.9168 11 1 5.9462 -1.0161 5.8867 12 6 7.3616 -1.8474 4.4916 13 6 7.9600 -1.4882 3.1301 14 6 8.6891 -0.1468 3.2314 15 1 9.4867 -0.2218 3.9705 16 6 9.2881 0.2120 1.8700 17 8 10.0662 1.4044 1.9914 18 6 7.7001 0.9403 3.6565 19 6 7.1016 0.5811 5.0181 20 6 2.0193 -2.1288 2.9409 21 6 1.6152 -3.2334 3.8877 22 6 0.1224 -3.5205 3.6820 23 6 -0.1558 -3.6708 2.1833 24 6 -0.0048 -2.3109 1.4959 25 7 1.2885 -1.7250 1.8771 26 1 -0.3933 0.4417 -0.7650 27 1 1.7924 -0.5137 -0.8900 28 1 1.5615 2.4679 1.2085 29 1 3.5346 1.7704 -0.0321 30 1 3.8116 0.3094 1.6060 31 1 5.3591 -0.0032 3.2116 32 1 6.8422 -2.8030 4.4194 33 1 8.1589 -1.9225 5.2309 34 1 7.1625 -1.4133 2.3909 35 1 8.6643 -2.2630 2.8269 36 1 9.9243 -0.6036 1.5265 37 1 8.4850 0.3739 1.1510 38 1 10.4768 1.6921 1.1645 39 1 8.2194 1.8960 3.7283 40 1 6.9026 1.0152 2.9174 41 1 7.8990 0.5064 5.7575 42 1 6.3971 1.3556 5.3210 43 1 2.1949 -4.1313 3.6738 44 1 1.7912 -2.9186 4.9162 45 1 -0.1458 -4.4430 4.1969 46 1 -0.4661 -2.6950 4.0823 47 1 0.5534 -4.3768 1.7514 48 1 -1.1707 -4.0406 2.0377 49 1 -0.0412 -2.4425 0.4144 50 1 -0.8122 -1.6504 1.8122 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207534_16915396.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:58:08 Heat of formation + Delta-G solvation = -91.356042 kcal Electronic energy + Delta-G solvation = -30689.552938 eV Core-core repulsion = 26682.678052 eV Total energy + Delta-G solvation = -4006.874886 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.193 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -42.71845 -40.92453 -39.12135 -37.98720 -37.37528 -36.88585 -34.53832 -33.49148 -31.80311 -31.55113 -31.18680 -29.28368 -26.76369 -26.23018 -24.53976 -24.01275 -23.62597 -22.08621 -21.63619 -21.30492 -20.00448 -19.47923 -18.56374 -18.24442 -18.18370 -16.89223 -16.72537 -16.63511 -16.18109 -15.90173 -15.77088 -15.61612 -15.46235 -15.12296 -15.08503 -14.92246 -14.72283 -14.47519 -14.30066 -14.15436 -13.93271 -13.79710 -13.28704 -13.19300 -13.08490 -12.99572 -12.86089 -12.50298 -12.44237 -12.11836 -12.09010 -12.03096 -11.84503 -11.80007 -11.49614 -11.26937 -11.05464 -10.86429 -10.68738 -10.58098 -9.84170 -9.52180 -8.95906 -5.08522 0.89805 0.98746 1.39695 1.61009 1.85374 1.99960 2.55619 2.76036 3.05435 3.21398 3.50498 3.58277 3.69125 3.70360 3.75458 3.80723 3.83123 3.92334 4.13819 4.17338 4.25637 4.30038 4.33206 4.34969 4.40947 4.42235 4.43945 4.51388 4.53705 4.56204 4.69094 4.70205 4.73237 4.77741 4.79781 4.82166 4.91419 5.00292 5.04874 5.14511 5.16089 5.18645 5.19741 5.23004 5.29389 5.44066 5.46268 5.72838 5.79351 6.12248 6.24896 6.40209 6.67057 6.81250 7.58432 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.552 6.552 2 C -0.047 4.047 3 Si 0.707 3.293 4 C 0.038 3.962 5 C -0.178 4.178 6 C -0.233 4.233 7 C 0.595 3.405 8 O -0.548 6.548 9 N -0.721 5.721 10 C 0.147 3.853 11 H 0.089 0.911 12 C -0.128 4.128 13 C -0.112 4.112 14 C -0.087 4.087 15 H 0.080 0.920 16 C 0.079 3.921 17 O -0.573 6.573 18 C -0.111 4.111 19 C -0.129 4.129 20 C 0.120 3.880 21 C -0.055 4.055 22 C -0.129 4.129 23 C -0.140 4.140 24 C 0.114 3.886 25 N -0.422 5.422 26 H 0.387 0.613 27 H 0.077 0.923 28 H -0.252 1.252 29 H -0.254 1.254 30 H 0.143 0.857 31 H 0.397 0.603 32 H 0.071 0.929 33 H 0.073 0.927 34 H 0.064 0.936 35 H 0.064 0.936 36 H 0.045 0.955 37 H 0.044 0.956 38 H 0.380 0.620 39 H 0.074 0.926 40 H 0.055 0.945 41 H 0.080 0.920 42 H 0.070 0.930 43 H 0.088 0.912 44 H 0.100 0.900 45 H 0.080 0.920 46 H 0.069 0.931 47 H 0.073 0.927 48 H 0.089 0.911 49 H 0.093 0.907 50 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.202 1.429 -6.847 7.333 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.358 6.358 2 C -0.157 4.157 3 Si 0.606 3.394 4 C -0.072 4.072 5 C -0.203 4.203 6 C -0.243 4.243 7 C 0.384 3.616 8 O -0.428 6.428 9 N -0.373 5.373 10 C 0.043 3.957 11 H 0.107 0.893 12 C -0.167 4.167 13 C -0.149 4.149 14 C -0.106 4.106 15 H 0.098 0.902 16 C 0.001 3.999 17 O -0.379 6.379 18 C -0.148 4.148 19 C -0.167 4.167 20 C 0.002 3.998 21 C -0.092 4.092 22 C -0.167 4.167 23 C -0.178 4.178 24 C -0.006 4.006 25 N -0.098 5.098 26 H 0.235 0.765 27 H 0.095 0.905 28 H -0.176 1.176 29 H -0.179 1.179 30 H 0.160 0.840 31 H 0.232 0.768 32 H 0.090 0.910 33 H 0.091 0.909 34 H 0.082 0.918 35 H 0.083 0.917 36 H 0.064 0.936 37 H 0.062 0.938 38 H 0.226 0.774 39 H 0.093 0.907 40 H 0.074 0.926 41 H 0.099 0.901 42 H 0.088 0.912 43 H 0.107 0.893 44 H 0.119 0.881 45 H 0.099 0.901 46 H 0.087 0.913 47 H 0.092 0.908 48 H 0.107 0.893 49 H 0.111 0.889 50 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges -2.213 0.954 -4.730 5.309 hybrid contribution 0.307 -0.165 -0.991 1.051 sum -1.906 0.788 -5.722 6.082 Atomic orbital electron populations 1.86426 1.17338 1.81891 1.50192 1.24438 0.85444 1.10359 0.95485 0.95558 0.80790 0.75397 0.87640 1.19634 0.94865 0.94390 0.98272 1.21597 0.98416 1.02728 0.97512 1.19823 0.98334 1.04556 1.01537 1.17275 0.80679 0.80171 0.83477 1.90754 1.79279 1.36840 1.35883 1.45892 1.20756 1.38870 1.31824 1.20920 0.86911 0.95169 0.92715 0.89266 1.21886 0.98562 0.99116 0.97089 1.21479 0.99536 0.95893 0.98032 1.21179 0.97875 0.95038 0.96508 0.90192 1.22240 0.93713 0.86718 0.97244 1.86474 1.69282 1.44027 1.38070 1.21515 0.97895 0.99100 0.96326 1.21852 1.00189 0.96311 0.98304 1.20413 0.91245 0.97986 0.90106 1.20516 0.95421 0.95001 0.98280 1.21728 0.96187 1.03075 0.95690 1.21965 1.03641 0.95960 0.96223 1.22067 0.82768 0.94671 1.01110 1.43857 1.17552 1.26982 1.21386 0.76460 0.90503 1.17635 1.17908 0.83970 0.76817 0.91034 0.90873 0.91765 0.91724 0.93637 0.93794 0.77357 0.90682 0.92593 0.90133 0.91159 0.89329 0.88131 0.90144 0.91262 0.90780 0.89269 0.88899 0.89363 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.91 10.65 -35.23 -0.38 0.53 16 2 C -0.05 0.04 2.98 36.01 0.11 0.15 16 3 Si 0.71 -1.21 31.21 -169.99 -5.31 -6.52 16 4 C 0.04 0.10 6.19 -81.88 -0.51 -0.41 16 5 C -0.18 -0.56 9.08 -37.46 -0.34 -0.90 16 6 C -0.23 -1.07 6.28 -103.48 -0.65 -1.72 16 7 C 0.59 3.03 7.77 -12.59 -0.10 2.93 16 8 O -0.55 -4.19 15.00 5.26 0.08 -4.11 16 9 N -0.72 -1.73 4.23 -54.93 -0.23 -1.96 16 10 C 0.15 0.25 2.78 -67.93 -0.19 0.06 16 11 H 0.09 0.29 7.58 -51.93 -0.39 -0.10 16 12 C -0.13 -0.17 5.60 -26.73 -0.15 -0.32 16 13 C -0.11 -0.04 5.05 -26.73 -0.13 -0.18 16 14 C -0.09 -0.03 2.43 -90.62 -0.22 -0.25 16 15 H 0.08 0.09 8.14 -51.93 -0.42 -0.33 16 16 C 0.08 -0.01 6.43 37.16 0.24 0.23 16 17 O -0.57 -0.50 13.20 -35.23 -0.46 -0.96 16 18 C -0.11 -0.03 4.93 -26.73 -0.13 -0.16 16 19 C -0.13 -0.03 5.61 -26.73 -0.15 -0.18 16 20 C 0.12 0.48 6.57 -81.64 -0.54 -0.06 16 21 C -0.05 -0.13 5.32 -27.53 -0.15 -0.28 16 22 C -0.13 -0.01 5.98 -26.44 -0.16 -0.17 16 23 C -0.14 0.13 5.92 -26.58 -0.16 -0.03 16 24 C 0.11 0.03 5.32 -3.70 -0.02 0.01 16 25 N -0.42 -1.17 3.11 -107.37 -0.33 -1.50 16 26 H 0.39 -2.54 8.74 45.56 0.40 -2.14 16 27 H 0.08 -0.19 7.96 -51.93 -0.41 -0.60 16 28 H -0.25 -0.61 7.11 56.52 0.40 -0.20 16 29 H -0.25 -0.07 6.88 56.52 0.39 0.32 16 30 H 0.14 0.21 6.36 -52.49 -0.33 -0.12 16 31 H 0.40 0.41 5.99 -40.82 -0.24 0.16 16 32 H 0.07 0.23 8.14 -51.93 -0.42 -0.20 16 33 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 34 H 0.06 0.05 7.60 -51.93 -0.39 -0.34 16 35 H 0.06 0.01 8.14 -51.93 -0.42 -0.42 16 36 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 37 H 0.04 -0.03 8.14 -51.93 -0.42 -0.45 16 38 H 0.38 -1.19 9.12 45.56 0.42 -0.78 16 39 H 0.07 0.09 7.82 -51.93 -0.41 -0.31 16 40 H 0.06 0.00 6.51 -51.93 -0.34 -0.34 16 41 H 0.08 -0.01 8.14 -51.93 -0.42 -0.44 16 42 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 43 H 0.09 0.22 8.14 -51.93 -0.42 -0.21 16 44 H 0.10 0.37 7.40 -51.93 -0.38 -0.01 16 45 H 0.08 -0.08 8.14 -51.93 -0.42 -0.51 16 46 H 0.07 0.03 8.12 -51.93 -0.42 -0.39 16 47 H 0.07 -0.04 8.11 -51.93 -0.42 -0.46 16 48 H 0.09 -0.22 8.14 -51.93 -0.42 -0.65 16 49 H 0.09 -0.05 7.69 -51.93 -0.40 -0.45 16 50 H 0.09 0.03 8.00 -51.93 -0.42 -0.38 16 LS Contribution 382.20 15.07 5.76 5.76 Total: 0.00 -8.89 382.20 -11.73 -20.62 By element: Atomic # 1 Polarization: -2.97 SS G_CDS: -7.61 Total: -10.59 kcal Atomic # 6 Polarization: 1.97 SS G_CDS: -3.24 Total: -1.27 kcal Atomic # 7 Polarization: -2.90 SS G_CDS: -0.57 Total: -3.46 kcal Atomic # 8 Polarization: -3.78 SS G_CDS: -0.76 Total: -4.54 kcal Atomic # 14 Polarization: -1.21 SS G_CDS: -5.31 Total: -6.52 kcal Total LS contribution 5.76 Total: 5.76 kcal Total: -8.89 -11.73 -20.62 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_16915396.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -70.739 kcal (2) G-P(sol) polarization free energy of solvation -8.888 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -79.627 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.729 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.617 kcal (6) G-S(sol) free energy of system = (1) + (5) -91.356 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds