Wall clock time and date at job start Tue Mar 9 2021 14:58:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86299 * 109.47004 * 2 1 4 4 C 1.50706 * 109.47147 * 119.99485 * 2 1 3 5 5 C 1.38258 * 119.94528 * 244.72952 * 4 2 1 6 6 C 1.38146 * 120.05422 * 179.72537 * 5 4 2 7 7 C 1.38731 * 119.94413 * 0.54550 * 6 5 4 8 8 O 1.35904 * 120.05682 * 179.75014 * 7 6 5 9 9 C 1.42900 * 116.99972 * 359.97438 * 8 7 6 10 10 C 1.52992 * 109.47114 * 179.97438 * 9 8 7 11 11 C 1.50695 * 109.47231 * 180.02562 * 10 9 8 12 12 O 1.21280 * 120.00418 * 0.02562 * 11 10 9 13 13 N 1.34781 * 119.99893 * 180.02562 * 11 10 9 14 14 C 1.46500 * 119.99682 * 180.02562 * 13 11 10 15 15 H 1.09000 * 109.47504 * 324.99755 * 14 13 11 16 16 C 1.53002 * 109.47657 * 85.00078 * 14 13 11 17 17 C 1.53001 * 109.46934 * 59.99523 * 16 14 13 18 18 C 1.53002 * 109.47153 * 60.00408 * 17 16 14 19 19 H 1.08997 * 109.46704 * 59.99478 * 18 17 16 20 20 C 1.52994 * 109.47224 * 179.97438 * 18 17 16 21 21 O 1.42903 * 109.47094 * 295.00007 * 20 18 17 22 22 C 1.53000 * 109.46883 * 300.00016 * 18 17 16 23 23 C 1.53001 * 109.47239 * 60.00037 * 22 18 17 24 24 C 1.38733 * 119.88899 * 359.72882 * 7 6 5 25 25 C 1.38152 * 119.94016 * 359.97438 * 24 7 6 26 26 H 0.96695 * 114.00385 * 299.99841 * 1 2 3 27 27 H 1.09000 * 109.47736 * 240.00116 * 2 1 3 28 28 H 1.48504 * 109.99999 * 299.99533 * 3 2 1 29 29 H 1.48501 * 110.00135 * 61.31516 * 3 2 1 30 30 H 1.08007 * 119.97408 * 359.97438 * 5 4 2 31 31 H 1.08001 * 120.02729 * 180.28121 * 6 5 4 32 32 H 1.08999 * 109.47032 * 300.00323 * 9 8 7 33 33 H 1.09004 * 109.46743 * 59.99949 * 9 8 7 34 34 H 1.08997 * 109.47682 * 300.00930 * 10 9 8 35 35 H 1.09004 * 109.47222 * 60.00408 * 10 9 8 36 36 H 0.96997 * 120.00320 * 0.02562 * 13 11 10 37 37 H 1.08997 * 109.47333 * 180.02562 * 16 14 13 38 38 H 1.09007 * 109.46532 * 299.99800 * 16 14 13 39 39 H 1.09002 * 109.47353 * 300.00238 * 17 16 14 40 40 H 1.09002 * 109.47101 * 180.02562 * 17 16 14 41 41 H 1.09002 * 109.47119 * 55.00244 * 20 18 17 42 42 H 1.08990 * 109.47139 * 175.00364 * 20 18 17 43 43 H 0.96702 * 113.99939 * 179.97438 * 21 20 18 44 44 H 1.08997 * 109.47012 * 299.99274 * 22 18 17 45 45 H 1.09007 * 109.46548 * 179.97438 * 22 18 17 46 46 H 1.09005 * 109.46673 * 179.97438 * 23 22 18 47 47 H 1.09002 * 109.47353 * 59.99968 * 23 22 18 48 48 H 1.07994 * 120.02980 * 179.97438 * 24 7 6 49 49 H 1.07998 * 119.96619 * 180.02562 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 2.6435 -0.0121 2.1881 6 6 3.1002 -0.6597 3.3196 7 6 2.8534 -2.0143 3.4894 8 8 3.3059 -2.6548 4.5993 9 6 4.0296 -1.8715 5.5506 10 6 4.4542 -2.7577 6.7233 11 6 5.2168 -1.9316 7.7268 12 8 5.4020 -0.7502 7.5243 13 7 5.6930 -2.5056 8.8494 14 6 6.4338 -1.7023 9.8252 15 1 7.0238 -0.9492 9.3029 16 6 5.4488 -1.0126 10.7712 17 6 4.6207 -2.0698 11.5044 18 6 5.5514 -2.9778 12.3108 19 1 6.1027 -2.3801 13.0367 20 6 4.7233 -4.0345 13.0444 21 8 3.8862 -3.3969 14.0113 22 6 6.5365 -3.6674 11.3648 23 6 7.3646 -2.6102 10.6316 24 6 2.1434 -2.7139 2.5245 25 6 1.6836 -2.0603 1.3976 26 1 -0.3934 0.4416 0.7650 27 1 1.7924 -0.5138 -0.8900 28 1 1.5615 2.4679 -1.2086 29 1 1.5877 2.4586 1.2242 30 1 2.8396 1.0414 2.0532 31 1 3.6526 -0.1129 4.0695 32 1 4.9145 -1.4487 5.0751 33 1 3.3935 -1.0655 5.9165 34 1 3.5690 -3.1802 7.1986 35 1 5.0901 -3.5640 6.3578 36 1 5.5452 -3.4505 9.0113 37 1 6.0000 -0.4147 11.4969 38 1 4.7857 -0.3658 10.1967 39 1 4.0694 -2.6674 10.7784 40 1 3.9186 -1.5785 12.1780 41 1 4.1044 -4.5736 12.3271 42 1 5.3906 -4.7346 13.5470 43 1 3.3313 -4.0079 14.5152 44 1 5.9853 -4.2650 10.6388 45 1 7.1999 -4.3139 11.9394 46 1 8.0668 -3.1017 9.9580 47 1 7.9159 -2.0126 11.3576 48 1 1.9503 -3.7685 2.6541 49 1 1.1304 -2.6044 0.6463 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7207534_4549602.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:58:15 Heat of formation + Delta-G solvation = -143.792478 kcal Electronic energy + Delta-G solvation = -28575.975748 eV Core-core repulsion = 24469.108385 eV Total energy + Delta-G solvation = -4106.867362 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.182 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -41.54194 -41.15231 -39.66590 -39.11567 -37.49771 -37.28662 -34.81391 -33.45725 -32.13874 -31.82421 -31.67059 -31.02913 -26.86519 -26.28078 -25.45321 -23.73497 -23.56064 -22.33691 -22.08354 -21.65793 -20.20053 -19.56281 -18.46235 -18.23858 -17.88586 -17.49617 -17.19845 -16.83415 -16.50812 -16.39521 -16.10337 -15.94631 -15.81923 -15.54283 -15.14472 -14.88350 -14.72829 -14.63850 -14.41722 -14.29251 -14.03101 -13.92325 -13.51681 -13.43426 -13.20892 -13.05356 -12.88115 -12.78520 -12.43697 -12.28780 -12.13883 -12.07520 -11.79657 -11.59617 -11.56785 -11.31728 -11.11221 -11.02120 -10.81388 -10.60026 -10.08796 -10.04801 -9.23778 -4.93992 0.26912 0.29670 1.30920 1.54897 1.57445 1.72203 1.92972 2.51346 2.63896 3.30806 3.43501 3.55357 3.65770 3.71100 3.73245 3.81836 3.86956 3.89233 3.92224 4.01108 4.07010 4.24894 4.28449 4.33437 4.40746 4.42727 4.44144 4.48706 4.50605 4.56018 4.65541 4.66996 4.68596 4.73735 4.75725 4.78673 4.96718 5.01366 5.06257 5.09664 5.15505 5.17075 5.23274 5.27906 5.40115 5.44024 5.48258 5.52508 5.71147 6.30925 6.48158 6.48587 6.89204 7.18310 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.074 4.074 3 Si 0.759 3.241 4 C -0.158 4.158 5 C -0.081 4.081 6 C -0.211 4.211 7 C 0.124 3.876 8 O -0.321 6.321 9 C 0.074 3.926 10 C -0.133 4.133 11 C 0.519 3.481 12 O -0.583 6.583 13 N -0.707 5.707 14 C 0.147 3.853 15 H 0.071 0.929 16 C -0.129 4.129 17 C -0.101 4.101 18 C -0.088 4.088 19 H 0.066 0.934 20 C 0.075 3.925 21 O -0.599 6.599 22 C -0.109 4.109 23 C -0.120 4.120 24 C -0.158 4.158 25 C -0.058 4.058 26 H 0.385 0.615 27 H 0.127 0.873 28 H -0.302 1.302 29 H -0.287 1.287 30 H 0.141 0.859 31 H 0.138 0.862 32 H 0.068 0.932 33 H 0.062 0.938 34 H 0.124 0.876 35 H 0.128 0.872 36 H 0.415 0.585 37 H 0.072 0.928 38 H 0.045 0.955 39 H 0.064 0.936 40 H 0.049 0.951 41 H 0.055 0.945 42 H 0.056 0.944 43 H 0.395 0.605 44 H 0.077 0.923 45 H 0.082 0.918 46 H 0.084 0.916 47 H 0.082 0.918 48 H 0.143 0.857 49 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.524 -6.358 3.181 7.935 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.183 4.183 3 Si 0.665 3.335 4 C -0.159 4.159 5 C -0.099 4.099 6 C -0.229 4.229 7 C 0.078 3.922 8 O -0.235 6.235 9 C -0.002 4.002 10 C -0.173 4.173 11 C 0.306 3.694 12 O -0.464 6.464 13 N -0.360 5.360 14 C 0.042 3.958 15 H 0.089 0.911 16 C -0.167 4.167 17 C -0.139 4.139 18 C -0.107 4.107 19 H 0.084 0.916 20 C -0.002 4.002 21 O -0.407 6.407 22 C -0.147 4.147 23 C -0.158 4.158 24 C -0.177 4.177 25 C -0.076 4.076 26 H 0.234 0.766 27 H 0.145 0.855 28 H -0.230 1.230 29 H -0.213 1.213 30 H 0.159 0.841 31 H 0.156 0.844 32 H 0.086 0.914 33 H 0.080 0.920 34 H 0.142 0.858 35 H 0.147 0.853 36 H 0.253 0.747 37 H 0.090 0.910 38 H 0.064 0.936 39 H 0.083 0.917 40 H 0.068 0.932 41 H 0.074 0.926 42 H 0.074 0.926 43 H 0.244 0.756 44 H 0.096 0.904 45 H 0.100 0.900 46 H 0.102 0.898 47 H 0.101 0.899 48 H 0.161 0.839 49 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 3.831 -4.695 2.343 6.497 hybrid contribution -1.504 -0.460 1.003 1.866 sum 2.327 -5.156 3.347 6.572 Atomic orbital electron populations 1.86562 1.18624 1.80313 1.50143 1.25091 0.83286 1.11302 0.98643 0.94115 0.90556 0.72615 0.76185 1.20241 1.02580 0.95191 0.97867 1.21018 0.96048 1.00066 0.92760 1.21405 1.06553 0.93976 1.00989 1.19193 0.94560 0.91311 0.87115 1.85957 1.69264 1.38823 1.29423 1.22442 0.95804 0.93565 0.88388 1.21442 1.02969 0.99239 0.93624 1.20633 0.78691 0.87556 0.82519 1.90735 1.59641 1.18055 1.77922 1.45979 1.56083 1.14051 1.19930 1.20910 0.92431 0.93687 0.88722 0.91112 1.21883 0.98507 0.98078 0.98274 1.21391 0.97453 0.96914 0.98107 1.21179 0.96079 0.96519 0.96884 0.91567 1.22331 0.92791 0.94393 0.90689 1.86444 1.59286 1.40135 1.54841 1.21509 0.97432 0.97592 0.98157 1.21779 0.97269 0.97480 0.99247 1.20684 1.01753 1.01400 0.93830 1.21000 0.96533 0.93662 0.96413 0.76585 0.85528 1.22985 1.21340 0.84137 0.84426 0.91399 0.91980 0.85826 0.85349 0.74711 0.90973 0.93626 0.91685 0.93220 0.92628 0.92558 0.75570 0.90404 0.89980 0.89772 0.89936 0.83942 0.84048 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.97 12.83 -148.98 -1.91 -3.88 16 2 C -0.07 -0.04 2.80 71.24 0.20 0.16 16 3 Si 0.76 -0.20 29.87 68.60 2.05 1.85 16 4 C -0.16 -0.28 5.35 -19.85 -0.11 -0.38 16 5 C -0.08 -0.14 8.66 22.25 0.19 0.05 16 6 C -0.21 -0.70 9.04 22.37 0.20 -0.49 16 7 C 0.12 0.53 6.69 22.51 0.15 0.68 16 8 O -0.32 -1.06 10.14 -92.47 -0.94 -1.99 16 9 C 0.07 0.06 4.03 71.98 0.29 0.35 16 10 C -0.13 0.59 6.07 29.84 0.18 0.77 16 11 C 0.52 0.29 7.79 87.65 0.68 0.97 16 12 O -0.58 -5.68 15.64 -3.03 -0.05 -5.73 16 13 N -0.71 3.02 4.23 -442.53 -1.87 1.15 16 14 C 0.15 -0.29 2.78 44.99 0.13 -0.16 16 15 H 0.07 0.18 7.58 -2.39 -0.02 0.16 16 16 C -0.13 -0.09 5.60 30.60 0.17 0.08 16 17 C -0.10 0.08 4.94 30.60 0.15 0.23 16 18 C -0.09 0.32 2.43 -10.79 -0.03 0.29 16 19 H 0.07 -0.04 8.14 -2.39 -0.02 -0.06 16 20 C 0.08 -0.31 6.43 71.98 0.46 0.15 16 21 O -0.60 -0.03 13.19 -148.98 -1.97 -2.00 16 22 C -0.11 0.90 5.03 30.59 0.15 1.05 16 23 C -0.12 0.80 5.61 30.60 0.17 0.97 16 24 C -0.16 -0.46 9.99 22.37 0.22 -0.24 16 25 C -0.06 -0.12 9.68 22.25 0.22 0.10 16 26 H 0.39 -0.60 8.70 -74.06 -0.64 -1.25 16 27 H 0.13 -0.19 7.96 -2.39 -0.02 -0.21 16 28 H -0.30 -2.17 7.11 99.48 0.71 -1.46 16 29 H -0.29 -1.11 7.01 99.48 0.70 -0.41 16 30 H 0.14 -0.21 4.84 -2.91 -0.01 -0.22 16 31 H 0.14 0.26 6.30 -2.91 -0.02 0.24 16 32 H 0.07 0.13 7.62 -2.39 -0.02 0.11 16 33 H 0.06 0.17 7.62 -2.39 -0.02 0.15 16 34 H 0.12 -0.95 8.14 -2.39 -0.02 -0.97 16 35 H 0.13 -1.09 8.14 -2.39 -0.02 -1.11 16 36 H 0.41 -4.16 6.87 -92.71 -0.64 -4.79 16 37 H 0.07 0.05 8.14 -2.39 -0.02 0.03 16 38 H 0.04 0.25 8.14 -2.38 -0.02 0.23 16 39 H 0.06 -0.14 7.60 -2.39 -0.02 -0.15 16 40 H 0.05 0.19 7.82 -2.39 -0.02 0.17 16 41 H 0.06 -0.36 8.14 -2.39 -0.02 -0.38 16 42 H 0.06 -0.35 8.14 -2.39 -0.02 -0.37 16 43 H 0.39 -3.15 9.12 -74.06 -0.68 -3.83 16 44 H 0.08 -0.86 6.51 -2.39 -0.02 -0.88 16 45 H 0.08 -0.77 8.14 -2.38 -0.02 -0.79 16 46 H 0.08 -0.68 8.14 -2.38 -0.02 -0.70 16 47 H 0.08 -0.51 8.14 -2.39 -0.02 -0.53 16 48 H 0.14 0.03 8.06 -2.91 -0.02 0.01 16 49 H 0.14 -0.03 8.06 -2.91 -0.02 -0.05 16 Total: 0.00 -20.89 389.02 -2.20 -23.08 By element: Atomic # 1 Polarization: -16.11 SS G_CDS: -0.95 Total: -17.06 kcal Atomic # 6 Polarization: 1.13 SS G_CDS: 3.44 Total: 4.58 kcal Atomic # 7 Polarization: 3.02 SS G_CDS: -1.87 Total: 1.15 kcal Atomic # 8 Polarization: -8.74 SS G_CDS: -4.86 Total: -13.60 kcal Atomic # 14 Polarization: -0.20 SS G_CDS: 2.05 Total: 1.85 kcal Total: -20.89 -2.20 -23.08 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_4549602.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -120.708 kcal (2) G-P(sol) polarization free energy of solvation -20.889 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -141.597 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.195 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.085 kcal (6) G-S(sol) free energy of system = (1) + (5) -143.792 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds