Wall clock time and date at job start Tue Mar 9 2021 12:52:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86298 * 109.47725 * 2 1 4 4 C 1.50705 * 109.47171 * 240.00020 * 2 1 3 5 5 C 1.38238 * 119.94258 * 119.72187 * 4 2 1 6 6 C 1.38185 * 120.07139 * 179.76767 * 5 4 2 7 7 C 1.38676 * 119.95245 * 0.51657 * 6 5 4 8 8 O 1.35919 * 120.05933 * 179.76986 * 7 6 5 9 9 C 1.42899 * 117.00093 * 359.96606 * 8 7 6 10 10 C 1.50701 * 109.47616 * 180.02562 * 9 8 7 11 11 O 1.21279 * 119.99387 * 0.02562 * 10 9 8 12 12 N 1.34764 * 120.00293 * 180.02562 * 10 9 8 13 13 C 1.46502 * 120.00328 * 179.97438 * 12 10 9 14 14 H 1.09008 * 109.46608 * 35.00348 * 13 12 10 15 15 C 1.52998 * 109.47494 * 154.99659 * 13 12 10 16 16 C 1.53001 * 109.46804 * 60.00325 * 15 13 12 17 17 C 1.52995 * 109.47277 * 60.00096 * 16 15 13 18 18 H 1.09000 * 109.47417 * 59.99955 * 17 16 15 19 19 C 1.53001 * 109.47277 * 180.02562 * 17 16 15 20 20 O 1.42903 * 109.47141 * 184.99857 * 19 17 16 21 21 C 1.53002 * 109.46905 * 299.99963 * 17 16 15 22 22 C 1.52991 * 109.47288 * 275.00294 * 13 12 10 23 23 C 1.38832 * 119.88662 * 359.73980 * 7 6 5 24 24 Br 1.89098 * 120.03907 * 179.97438 * 23 7 6 25 25 C 1.38203 * 119.92370 * 0.02562 * 23 7 6 26 26 H 0.96709 * 113.99337 * 300.00145 * 1 2 3 27 27 H 1.09004 * 109.47533 * 120.00158 * 2 1 3 28 28 H 1.48506 * 109.99834 * 300.00610 * 3 2 1 29 29 H 1.48502 * 110.00011 * 61.31874 * 3 2 1 30 30 H 1.07999 * 119.96070 * 0.02871 * 5 4 2 31 31 H 1.07996 * 120.02302 * 180.23105 * 6 5 4 32 32 H 1.08997 * 109.47261 * 300.00927 * 9 8 7 33 33 H 1.09009 * 109.46923 * 60.00732 * 9 8 7 34 34 H 0.97005 * 120.00473 * 0.02562 * 12 10 9 35 35 H 1.08993 * 109.47701 * 180.02562 * 15 13 12 36 36 H 1.09006 * 109.47358 * 300.00630 * 15 13 12 37 37 H 1.09005 * 109.47153 * 180.02562 * 16 15 13 38 38 H 1.09001 * 109.47457 * 299.99721 * 16 15 13 39 39 H 1.08993 * 109.46978 * 304.99704 * 19 17 16 40 40 H 1.09003 * 109.46939 * 65.00449 * 19 17 16 41 41 H 0.96695 * 114.00005 * 179.97438 * 20 19 17 42 42 H 1.09006 * 109.47138 * 179.97438 * 21 17 16 43 43 H 1.08994 * 109.47313 * 299.99329 * 21 17 16 44 44 H 1.09000 * 109.47539 * 59.99272 * 22 13 12 45 45 H 1.09000 * 109.47502 * 179.97438 * 22 13 12 46 46 H 1.08000 * 119.97685 * 180.02562 * 25 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7212 -0.0358 -2.1426 6 6 3.1873 -0.6860 -3.2693 7 6 2.8532 -2.0136 -3.4906 8 8 3.3066 -2.6539 -4.6005 9 6 4.1225 -1.8980 -5.4977 10 6 4.5274 -2.7661 -6.6611 11 8 4.1535 -3.9185 -6.7166 12 7 5.3048 -2.2620 -7.6396 13 6 5.6989 -3.1061 -8.7703 14 1 4.8852 -3.7890 -9.0148 15 6 6.0060 -2.2244 -9.9824 16 6 7.1481 -1.2657 -9.6393 17 6 8.3943 -2.0704 -9.2651 18 1 8.6875 -2.6985 -10.1063 19 6 9.5362 -1.1118 -8.9214 20 8 10.7310 -1.8593 -8.6852 21 6 8.0871 -2.9521 -8.0530 22 6 6.9451 -3.9108 -8.3961 23 6 2.0554 -2.6878 -2.5760 24 35 1.5966 -4.4980 -2.8738 25 6 1.5960 -2.0342 -1.4483 26 1 -0.3932 0.4418 0.7651 27 1 1.7924 -0.5139 0.8900 28 1 1.5615 2.4679 -1.2085 29 1 1.5881 2.4585 1.2242 30 1 2.9778 0.9993 -1.9721 31 1 3.8074 -0.1592 -3.9794 32 1 3.5603 -1.0391 -5.8640 33 1 5.0141 -1.5524 -4.9743 34 1 5.6041 -1.3404 -7.5951 35 1 6.2988 -2.8524 -10.8238 36 1 5.1181 -1.6510 -10.2491 37 1 7.3666 -0.6372 -10.5027 38 1 6.8549 -0.6376 -8.7981 39 1 9.6959 -0.4244 -9.7520 40 1 9.2786 -0.5461 -8.0259 41 1 11.4980 -1.3146 -8.4617 42 1 8.9749 -3.5258 -7.7866 43 1 7.7941 -2.3241 -7.2118 44 1 6.7263 -4.5389 -7.5326 45 1 7.2380 -4.5392 -9.2372 46 1 0.9756 -2.5580 -0.7362 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7207534_6201210.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:40 Heat of formation + Delta-G solvation = -127.676453 kcal Electronic energy + Delta-G solvation = -29193.545498 eV Core-core repulsion = 24903.096595 eV Total energy + Delta-G solvation = -4290.448903 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 400.076 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -41.75664 -41.10229 -39.68626 -38.89541 -37.49792 -37.31841 -34.84480 -33.65595 -32.18534 -31.85261 -31.72878 -30.46471 -29.31253 -26.48596 -26.09989 -24.09978 -23.65585 -22.51120 -22.09472 -21.87670 -20.22957 -19.52559 -18.69311 -18.47131 -18.13767 -17.51525 -17.35680 -16.90371 -16.65402 -16.40655 -15.86374 -15.78207 -15.72481 -15.53322 -15.03794 -14.99412 -14.68671 -14.63444 -14.16027 -14.01959 -13.91427 -13.85753 -13.53188 -13.43053 -13.19124 -13.02860 -12.61494 -12.42310 -12.28096 -12.13871 -12.10397 -11.86319 -11.82645 -11.54451 -11.30464 -11.21740 -11.08925 -10.96961 -10.77985 -10.50370 -10.12333 -9.96697 -9.31159 -4.90570 -0.06160 0.11854 0.62930 1.32385 1.43520 1.49074 1.64202 1.98591 2.36494 2.53381 3.32811 3.34064 3.49197 3.63915 3.68350 3.73938 3.81903 3.88002 3.92849 4.02389 4.06223 4.08711 4.10310 4.29553 4.30149 4.43596 4.44861 4.49894 4.50883 4.51964 4.63706 4.68637 4.76051 4.78056 4.83884 4.98333 5.03273 5.06927 5.11308 5.17133 5.24596 5.24958 5.41812 5.44354 5.47268 5.51777 6.06421 6.47918 6.59255 6.93506 7.17190 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.561 6.561 2 C -0.088 4.088 3 Si 0.775 3.225 4 C -0.115 4.115 5 C -0.056 4.056 6 C -0.189 4.189 7 C 0.148 3.852 8 O -0.305 6.305 9 C 0.031 3.969 10 C 0.511 3.489 11 O -0.569 6.569 12 N -0.701 5.701 13 C 0.149 3.851 14 H 0.066 0.934 15 C -0.119 4.119 16 C -0.108 4.108 17 C -0.088 4.088 18 H 0.064 0.936 19 C 0.076 3.924 20 O -0.600 6.600 21 C -0.100 4.100 22 C -0.130 4.130 23 C -0.146 4.146 24 Br -0.054 7.054 25 C -0.036 4.036 26 H 0.395 0.605 27 H 0.094 0.906 28 H -0.289 1.289 29 H -0.291 1.291 30 H 0.164 0.836 31 H 0.182 0.818 32 H 0.130 0.870 33 H 0.133 0.867 34 H 0.418 0.582 35 H 0.081 0.919 36 H 0.085 0.915 37 H 0.083 0.917 38 H 0.082 0.918 39 H 0.056 0.944 40 H 0.059 0.941 41 H 0.395 0.605 42 H 0.049 0.951 43 H 0.068 0.932 44 H 0.042 0.958 45 H 0.071 0.929 46 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.190 11.313 -0.121 12.896 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.371 6.371 2 C -0.196 4.196 3 Si 0.679 3.321 4 C -0.116 4.116 5 C -0.074 4.074 6 C -0.207 4.207 7 C 0.100 3.900 8 O -0.217 6.217 9 C -0.046 4.046 10 C 0.297 3.703 11 O -0.447 6.447 12 N -0.356 5.356 13 C 0.045 3.955 14 H 0.084 0.916 15 C -0.157 4.157 16 C -0.146 4.146 17 C -0.107 4.107 18 H 0.082 0.918 19 C -0.002 4.002 20 O -0.408 6.408 21 C -0.138 4.138 22 C -0.169 4.169 23 C -0.226 4.226 24 Br 0.032 6.968 25 C -0.056 4.056 26 H 0.246 0.754 27 H 0.112 0.888 28 H -0.216 1.216 29 H -0.218 1.218 30 H 0.181 0.819 31 H 0.199 0.801 32 H 0.148 0.852 33 H 0.150 0.850 34 H 0.257 0.743 35 H 0.100 0.900 36 H 0.103 0.897 37 H 0.101 0.899 38 H 0.100 0.900 39 H 0.074 0.926 40 H 0.077 0.923 41 H 0.244 0.756 42 H 0.068 0.932 43 H 0.087 0.913 44 H 0.061 0.939 45 H 0.089 0.911 46 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 5.209 9.615 -1.034 10.984 hybrid contribution -0.750 0.446 0.789 1.176 sum 4.459 10.061 -0.245 11.007 Atomic orbital electron populations 1.86554 1.18662 1.80802 1.51051 1.25105 0.84066 1.12443 0.97997 0.94211 0.89872 0.71182 0.76814 1.19441 1.00990 0.93422 0.97791 1.21213 0.94122 1.00335 0.91697 1.21545 1.05731 0.92075 1.01395 1.18794 0.93197 0.91798 0.86213 1.86251 1.64682 1.39768 1.31001 1.22882 0.97854 0.94388 0.89512 1.20512 0.78230 0.87614 0.83935 1.90786 1.55669 1.20163 1.78084 1.45779 1.51173 1.16575 1.22121 1.20902 0.95924 0.92662 0.86018 0.91577 1.21778 0.99656 0.98275 0.96005 1.21510 0.92799 0.97412 1.02876 1.21184 0.94472 0.96949 0.98090 0.91768 1.22334 0.84552 0.93188 1.00080 1.86449 1.21490 1.39668 1.93185 1.21391 0.96894 0.97551 0.97923 1.21887 0.95459 0.98187 1.01333 1.21272 1.08251 0.92972 1.00057 1.96748 1.92438 1.10891 1.96756 1.20875 0.96021 0.94437 0.94243 0.75404 0.88842 1.21582 1.21791 0.81868 0.80066 0.85232 0.84969 0.74347 0.90020 0.89682 0.89885 0.89977 0.92584 0.92275 0.75564 0.93217 0.91298 0.93914 0.91058 0.84547 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.73 12.74 -148.98 -1.90 -2.63 16 2 C -0.09 0.20 2.81 71.24 0.20 0.40 16 3 Si 0.78 -4.21 29.78 68.60 2.04 -2.17 16 4 C -0.12 -0.09 5.42 -19.85 -0.11 -0.20 16 5 C -0.06 0.20 8.66 22.26 0.19 0.39 16 6 C -0.19 0.72 9.04 22.36 0.20 0.92 16 7 C 0.15 0.58 6.68 22.52 0.15 0.73 16 8 O -0.30 -1.82 9.01 -73.60 -0.66 -2.48 16 9 C 0.03 -0.13 5.22 71.24 0.37 0.24 16 10 C 0.51 1.29 7.87 87.66 0.69 1.98 16 11 O -0.57 -8.51 16.16 16.01 0.26 -8.25 16 12 N -0.70 3.14 4.23 -442.56 -1.87 1.27 16 13 C 0.15 -0.21 2.78 44.99 0.13 -0.08 16 14 H 0.07 0.28 7.58 -2.38 -0.02 0.26 16 15 C -0.12 0.82 5.61 30.59 0.17 0.99 16 16 C -0.11 1.02 5.03 30.59 0.15 1.17 16 17 C -0.09 0.39 2.43 -10.79 -0.03 0.37 16 18 H 0.06 -0.06 8.14 -2.39 -0.02 -0.08 16 19 C 0.08 -0.41 6.43 71.98 0.46 0.05 16 20 O -0.60 0.52 13.19 -148.98 -1.97 -1.45 16 21 C -0.10 0.13 4.94 30.60 0.15 0.28 16 22 C -0.13 -0.17 5.60 30.59 0.17 0.00 16 23 C -0.15 -1.10 6.24 22.40 0.14 -0.96 16 24 Br -0.05 -0.59 33.16 -20.37 -0.68 -1.27 16 25 C -0.04 -0.18 9.35 22.27 0.21 0.03 16 26 H 0.40 -2.62 8.74 -74.05 -0.65 -3.27 16 27 H 0.09 -0.52 7.96 -2.38 -0.02 -0.54 16 28 H -0.29 -0.15 7.11 99.48 0.71 0.56 16 29 H -0.29 0.09 7.11 99.48 0.71 0.79 16 30 H 0.16 -1.56 4.87 -2.91 -0.01 -1.57 16 31 H 0.18 -2.31 6.30 -2.91 -0.02 -2.33 16 32 H 0.13 -1.44 7.66 -2.39 -0.02 -1.46 16 33 H 0.13 -1.53 7.66 -2.38 -0.02 -1.54 16 34 H 0.42 -5.06 6.87 -92.70 -0.64 -5.70 16 35 H 0.08 -0.49 8.14 -2.39 -0.02 -0.51 16 36 H 0.08 -0.71 8.14 -2.38 -0.02 -0.73 16 37 H 0.08 -0.88 8.14 -2.38 -0.02 -0.90 16 38 H 0.08 -1.08 6.51 -2.39 -0.02 -1.10 16 39 H 0.06 -0.42 8.14 -2.39 -0.02 -0.44 16 40 H 0.06 -0.50 8.14 -2.39 -0.02 -0.52 16 41 H 0.39 -3.54 9.12 -74.06 -0.68 -4.21 16 42 H 0.05 0.17 7.82 -2.38 -0.02 0.15 16 43 H 0.07 -0.24 7.60 -2.39 -0.02 -0.26 16 44 H 0.04 0.30 8.14 -2.39 -0.02 0.28 16 45 H 0.07 0.11 8.14 -2.39 -0.02 0.09 16 46 H 0.14 0.67 8.06 -2.91 -0.02 0.64 16 Total: 0.00 -30.65 388.49 -2.40 -33.05 By element: Atomic # 1 Polarization: -21.51 SS G_CDS: -0.88 Total: -22.39 kcal Atomic # 6 Polarization: 3.06 SS G_CDS: 3.26 Total: 6.31 kcal Atomic # 7 Polarization: 3.14 SS G_CDS: -1.87 Total: 1.27 kcal Atomic # 8 Polarization: -10.54 SS G_CDS: -4.27 Total: -14.81 kcal Atomic # 14 Polarization: -4.21 SS G_CDS: 2.04 Total: -2.17 kcal Atomic # 35 Polarization: -0.59 SS G_CDS: -0.68 Total: -1.27 kcal Total: -30.65 -2.40 -33.05 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_6201210.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -94.629 kcal (2) G-P(sol) polarization free energy of solvation -30.648 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -125.277 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.399 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.047 kcal (6) G-S(sol) free energy of system = (1) + (5) -127.676 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds