Wall clock time and date at job start Tue Mar 9 2021 12:52:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86301 * 109.46909 * 2 1 4 4 C 1.50704 * 109.47565 * 239.99877 * 2 1 3 5 5 C 1.35452 * 125.56169 * 120.02146 * 4 2 1 6 6 C 1.39839 * 107.85974 * 179.71983 * 5 4 2 7 7 C 1.37869 * 107.08697 * 0.41826 * 6 5 4 8 8 C 1.46676 * 126.23406 * 179.84327 * 7 6 5 9 9 O 1.21694 * 120.00166 * 359.69110 * 8 7 6 10 10 N 1.34778 * 120.00097 * 179.69123 * 8 7 6 11 11 C 1.46499 * 120.00288 * 180.02562 * 10 8 7 12 12 H 1.09001 * 109.46813 * 34.99915 * 11 10 8 13 13 C 1.52996 * 109.47369 * 154.99725 * 11 10 8 14 14 C 1.53002 * 109.46972 * 60.00336 * 13 11 10 15 15 C 1.52997 * 109.47415 * 59.99860 * 14 13 11 16 16 H 1.09000 * 109.47140 * 59.99976 * 15 14 13 17 17 C 1.52999 * 109.47269 * 180.02562 * 15 14 13 18 18 O 1.42910 * 109.46729 * 294.99534 * 17 15 14 19 19 C 1.53006 * 109.47164 * 300.00027 * 15 14 13 20 20 C 1.52997 * 109.47012 * 274.99862 * 11 10 8 21 21 N 1.35528 * 125.56050 * 299.99855 * 4 2 1 22 22 H 0.96704 * 113.99695 * 60.00930 * 1 2 3 23 23 H 1.09004 * 109.47407 * 119.99854 * 2 1 3 24 24 H 1.48497 * 110.00308 * 59.99646 * 3 2 1 25 25 H 1.48507 * 110.00306 * 181.31912 * 3 2 1 26 26 H 1.07998 * 126.07258 * 359.97438 * 5 4 2 27 27 H 1.08000 * 126.45407 * 180.26144 * 6 5 4 28 28 H 0.97007 * 119.99934 * 0.02562 * 10 8 7 29 29 H 1.08992 * 109.47534 * 300.00357 * 13 11 10 30 30 H 1.08996 * 109.47134 * 179.97438 * 13 11 10 31 31 H 1.09000 * 109.46986 * 299.99742 * 14 13 11 32 32 H 1.09001 * 109.47601 * 180.02562 * 14 13 11 33 33 H 1.08997 * 109.47756 * 54.99411 * 17 15 14 34 34 H 1.09001 * 109.47317 * 175.00294 * 17 15 14 35 35 H 0.96696 * 113.99442 * 179.97438 * 18 17 15 36 36 H 1.08993 * 109.46955 * 180.02562 * 19 15 14 37 37 H 1.09000 * 109.47050 * 300.00004 * 19 15 14 38 38 H 1.09000 * 109.47140 * 179.97438 * 20 11 10 39 39 H 1.09002 * 109.47045 * 59.99785 * 20 11 10 40 40 H 0.97004 * 125.68206 * 0.02562 * 21 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.7138 -0.1637 -2.1915 6 6 2.9627 -1.1478 -3.1532 7 6 2.3028 -2.2879 -2.7464 8 6 2.2796 -3.5742 -3.4508 9 8 2.8785 -3.7031 -4.5023 10 7 1.5950 -4.6136 -2.9334 11 6 1.5722 -5.8986 -3.6366 12 1 2.5339 -6.0640 -4.1224 13 6 1.3068 -7.0238 -2.6345 14 6 -0.0431 -6.7916 -1.9527 15 6 -1.1513 -6.7761 -3.0075 16 1 -1.1682 -7.7322 -3.5308 17 6 -2.5010 -6.5433 -2.3258 18 8 -2.8031 -7.6522 -1.4763 19 6 -0.8859 -5.6509 -4.0097 20 6 0.4640 -5.8831 -4.6914 21 7 1.6745 -2.0008 -1.5557 22 1 -0.3933 0.4416 -0.7652 23 1 1.7924 -0.5138 0.8900 24 1 1.5613 2.4680 1.2084 25 1 3.5346 1.7704 -0.0321 26 1 3.0835 0.8509 -2.2095 27 1 3.5575 -1.0352 -4.0476 28 1 1.1173 -4.5108 -2.0954 29 1 2.0962 -7.0348 -1.8831 30 1 1.2894 -7.9797 -3.1578 31 1 -0.0262 -5.8355 -1.4295 32 1 -0.2321 -7.5929 -1.2384 33 1 -2.4550 -5.6315 -1.7304 34 1 -3.2784 -6.4438 -3.0834 35 1 -3.6467 -7.5722 -1.0104 36 1 -1.6756 -5.6396 -4.7608 37 1 -0.8689 -4.6948 -3.4864 38 1 0.4474 -6.8390 -5.2149 39 1 0.6531 -5.0815 -5.4054 40 1 1.1373 -2.6191 -1.0360 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207534_6580494.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:49 Heat of formation + Delta-G solvation = -84.804475 kcal Electronic energy + Delta-G solvation = -22701.508795 eV Core-core repulsion = 19289.757004 eV Total energy + Delta-G solvation = -3411.751791 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.146 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -42.54067 -41.05476 -39.30802 -37.82455 -37.49704 -34.88048 -32.48289 -31.92757 -31.77025 -30.93015 -27.16909 -26.23305 -23.80990 -23.58801 -22.24032 -21.63201 -21.15077 -20.25657 -19.96292 -18.34839 -18.20953 -16.92994 -16.76282 -16.75285 -16.17928 -15.99626 -15.78197 -15.33179 -15.12697 -15.07001 -14.86096 -14.43435 -14.29239 -14.07045 -13.99066 -13.74677 -13.39908 -13.24239 -13.13972 -12.64074 -12.28086 -12.26097 -12.07633 -11.64960 -11.42917 -11.21146 -11.13787 -10.96941 -10.76962 -10.14691 -10.07767 -9.25421 -5.08035 0.37581 1.09382 1.52912 1.63145 1.82445 2.05041 2.14391 2.41256 3.10577 3.24713 3.50685 3.54131 3.59004 3.75360 3.82257 4.00768 4.12294 4.19820 4.23618 4.26548 4.27984 4.35922 4.37750 4.40651 4.54531 4.59210 4.63924 4.86089 4.96310 4.98927 5.00675 5.04777 5.09380 5.11147 5.27604 5.31418 5.43927 5.60259 5.82808 6.20040 6.33385 6.45106 6.58531 7.15852 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.055 4.055 3 Si 0.722 3.278 4 C 0.021 3.979 5 C -0.200 4.200 6 C -0.098 4.098 7 C -0.051 4.051 8 C 0.590 3.410 9 O -0.524 6.524 10 N -0.725 5.725 11 C 0.147 3.853 12 H 0.093 0.907 13 C -0.130 4.130 14 C -0.110 4.110 15 C -0.089 4.089 16 H 0.081 0.919 17 C 0.079 3.921 18 O -0.573 6.573 19 C -0.111 4.111 20 C -0.130 4.130 21 N -0.524 5.524 22 H 0.383 0.617 23 H 0.115 0.885 24 H -0.254 1.254 25 H -0.252 1.252 26 H 0.151 0.849 27 H 0.153 0.847 28 H 0.392 0.608 29 H 0.071 0.929 30 H 0.083 0.917 31 H 0.053 0.947 32 H 0.076 0.924 33 H 0.043 0.957 34 H 0.046 0.954 35 H 0.381 0.619 36 H 0.067 0.933 37 H 0.061 0.939 38 H 0.076 0.924 39 H 0.073 0.927 40 H 0.415 0.585 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.641 1.609 1.379 4.212 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.166 4.166 3 Si 0.621 3.379 4 C -0.097 4.097 5 C -0.224 4.224 6 C -0.125 4.125 7 C -0.164 4.164 8 C 0.377 3.623 9 O -0.400 6.400 10 N -0.377 5.377 11 C 0.043 3.957 12 H 0.111 0.889 13 C -0.167 4.167 14 C -0.148 4.148 15 C -0.107 4.107 16 H 0.100 0.900 17 C 0.001 3.999 18 O -0.379 6.379 19 C -0.149 4.149 20 C -0.168 4.168 21 N -0.120 5.120 22 H 0.231 0.769 23 H 0.132 0.868 24 H -0.178 1.178 25 H -0.177 1.177 26 H 0.168 0.832 27 H 0.170 0.830 28 H 0.227 0.773 29 H 0.089 0.911 30 H 0.102 0.898 31 H 0.072 0.928 32 H 0.095 0.905 33 H 0.062 0.938 34 H 0.065 0.935 35 H 0.228 0.772 36 H 0.085 0.915 37 H 0.080 0.920 38 H 0.095 0.905 39 H 0.091 0.909 40 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges -2.136 1.423 1.417 2.932 hybrid contribution -1.043 -0.723 1.028 1.633 sum -3.179 0.701 2.445 4.071 Atomic orbital electron populations 1.86495 1.17057 1.81769 1.49635 1.24974 0.85175 1.11084 0.95336 0.93996 0.81109 0.75931 0.86828 1.21139 1.03878 0.85139 0.99586 1.20715 1.05123 1.00589 0.96002 1.21333 1.00298 0.90609 1.00235 1.20511 1.07872 0.96841 0.91223 1.17063 0.78732 0.82021 0.84471 1.90869 1.44307 1.82758 1.22045 1.46039 1.53206 1.11991 1.26460 1.21001 1.00058 0.81851 0.92837 0.88910 1.21870 0.97754 0.98447 0.98673 1.21517 0.93589 1.01891 0.97795 1.21192 0.93239 1.00170 0.96107 0.90031 1.22233 0.96512 0.88484 0.92688 1.86471 1.43794 1.44556 1.63055 1.21478 0.97533 0.97891 0.97998 1.21904 0.93950 1.03151 0.97801 1.41939 1.40211 1.11078 1.18778 0.76889 0.86779 1.17833 1.17674 0.83162 0.82959 0.77300 0.91066 0.89837 0.92849 0.90507 0.93844 0.93547 0.77240 0.91476 0.92025 0.90529 0.90870 0.74729 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.89 12.88 -35.23 -0.45 0.44 16 2 C -0.06 0.10 3.08 36.01 0.11 0.21 16 3 Si 0.72 -1.71 30.54 -169.99 -5.19 -6.90 16 4 C 0.02 -0.02 6.47 -81.95 -0.53 -0.55 16 5 C -0.20 0.03 9.32 -39.98 -0.37 -0.35 16 6 C -0.10 -0.16 10.65 -39.12 -0.42 -0.58 16 7 C -0.05 -0.07 7.06 -81.98 -0.58 -0.65 16 8 C 0.59 1.50 7.75 -12.85 -0.10 1.40 16 9 O -0.52 -3.26 16.55 5.19 0.09 -3.18 16 10 N -0.72 0.28 4.23 -55.12 -0.23 0.05 16 11 C 0.15 -0.04 2.78 -67.93 -0.19 -0.23 16 12 H 0.09 0.13 7.58 -51.93 -0.39 -0.27 16 13 C -0.13 0.20 5.61 -26.73 -0.15 0.05 16 14 C -0.11 0.17 4.93 -26.73 -0.13 0.04 16 15 C -0.09 0.11 2.43 -90.62 -0.22 -0.11 16 16 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 17 C 0.08 -0.10 6.43 37.16 0.24 0.14 16 18 O -0.57 0.06 13.20 -35.23 -0.46 -0.41 16 19 C -0.11 0.15 5.05 -26.73 -0.13 0.01 16 20 C -0.13 0.05 5.60 -26.73 -0.15 -0.10 16 21 N -0.52 0.44 5.99 -5.69 -0.03 0.41 16 22 H 0.38 -1.95 8.70 45.56 0.40 -1.55 16 23 H 0.11 -0.18 7.96 -51.93 -0.41 -0.60 16 24 H -0.25 -0.19 7.11 56.52 0.40 0.21 16 25 H -0.25 -0.05 7.11 56.52 0.40 0.35 16 26 H 0.15 -0.32 6.17 -52.49 -0.32 -0.64 16 27 H 0.15 0.22 8.06 -52.49 -0.42 -0.20 16 28 H 0.39 -0.95 6.00 -40.82 -0.24 -1.19 16 29 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 30 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 31 H 0.05 -0.12 6.51 -51.93 -0.34 -0.46 16 32 H 0.08 -0.02 7.82 -51.93 -0.41 -0.42 16 33 H 0.04 -0.09 8.14 -51.93 -0.42 -0.51 16 34 H 0.05 -0.08 8.14 -51.93 -0.42 -0.50 16 35 H 0.38 -1.50 9.12 45.56 0.42 -1.09 16 36 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 37 H 0.06 -0.08 7.60 -51.93 -0.39 -0.47 16 38 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 39 H 0.07 0.11 8.14 -51.93 -0.42 -0.32 16 40 H 0.42 -1.21 8.19 -40.82 -0.33 -1.55 16 LS Contribution 323.59 15.07 4.88 4.88 Total: 0.00 -8.11 323.59 -9.08 -17.19 By element: Atomic # 1 Polarization: -6.72 SS G_CDS: -5.04 Total: -11.76 kcal Atomic # 6 Polarization: 1.90 SS G_CDS: -2.62 Total: -0.72 kcal Atomic # 7 Polarization: 0.73 SS G_CDS: -0.27 Total: 0.46 kcal Atomic # 8 Polarization: -2.31 SS G_CDS: -0.83 Total: -3.14 kcal Atomic # 14 Polarization: -1.71 SS G_CDS: -5.19 Total: -6.90 kcal Total LS contribution 4.88 Total: 4.88 kcal Total: -8.11 -9.08 -17.19 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_6580494.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -67.619 kcal (2) G-P(sol) polarization free energy of solvation -8.107 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.727 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.078 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.185 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.804 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds