Wall clock time and date at job start Tue Mar 9 2021 12:52:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35962 * 116.99802 * 2 1 4 4 C 1.39453 * 120.12042 * 179.97438 * 3 2 1 5 5 O 1.34784 * 133.24201 * 359.93773 * 4 3 2 6 6 C 1.34919 * 110.84113 * 180.02562 * 5 4 3 7 7 C 1.46995 * 125.14056 * 179.97438 * 6 5 4 8 8 O 1.21652 * 119.99988 * 180.02562 * 7 6 5 9 9 N 1.34781 * 119.99817 * 0.02562 * 7 6 5 10 10 C 1.46499 * 119.99874 * 179.97438 * 9 7 6 11 11 H 1.09002 * 109.47391 * 325.00213 * 10 9 7 12 12 C 1.53000 * 109.46840 * 85.00543 * 10 9 7 13 13 C 1.52996 * 109.47328 * 59.99969 * 12 10 9 14 14 C 1.52993 * 109.47473 * 60.00001 * 13 12 10 15 15 H 1.09004 * 109.46998 * 59.99561 * 14 13 12 16 16 C 1.52996 * 109.47469 * 180.02562 * 14 13 12 17 17 O 1.42903 * 109.46756 * 294.99574 * 16 14 13 18 18 C 1.53008 * 109.46733 * 300.00094 * 14 13 12 19 19 C 1.52996 * 109.47409 * 60.00092 * 18 14 13 20 20 C 1.35813 * 109.72233 * 0.24189 * 6 5 4 21 21 C 1.40608 * 119.14042 * 179.97438 * 4 3 2 22 22 C 1.39780 * 120.11677 * 0.02562 * 21 4 3 23 23 C 1.50693 * 120.09362 * 180.02562 * 22 21 4 24 24 O 1.42899 * 109.47449 * 284.99769 * 23 22 21 25 25 Si 1.86304 * 109.47340 * 164.99988 * 23 22 21 26 26 C 1.36631 * 119.81173 * 359.97438 * 22 21 4 27 27 C 1.38257 * 120.12506 * 0.02562 * 3 2 1 28 28 H 1.09003 * 109.47546 * 299.99727 * 1 2 3 29 29 H 1.08997 * 109.47498 * 59.99672 * 1 2 3 30 30 H 1.09000 * 109.47149 * 180.02562 * 1 2 3 31 31 H 0.97002 * 119.99716 * 0.02562 * 9 7 6 32 32 H 1.09004 * 109.46724 * 180.02562 * 12 10 9 33 33 H 1.09001 * 109.47194 * 299.99493 * 12 10 9 34 34 H 1.09000 * 109.46870 * 299.99783 * 13 12 10 35 35 H 1.09004 * 109.47108 * 179.97438 * 13 12 10 36 36 H 1.09001 * 109.47552 * 54.99254 * 16 14 13 37 37 H 1.08998 * 109.47651 * 175.00158 * 16 14 13 38 38 H 0.96699 * 114.00071 * 179.97438 * 17 16 14 39 39 H 1.09004 * 109.46943 * 299.99499 * 18 14 13 40 40 H 1.09001 * 109.46630 * 179.97438 * 18 14 13 41 41 H 1.08996 * 109.47452 * 179.97438 * 19 18 14 42 42 H 1.09000 * 109.47054 * 59.99785 * 19 18 14 43 43 H 1.08008 * 126.95544 * 179.75572 * 20 6 5 44 44 H 1.09007 * 109.47382 * 44.99934 * 23 22 21 45 45 H 0.96703 * 114.00330 * 179.97438 * 24 23 22 46 46 H 1.48504 * 109.99754 * 298.68356 * 25 23 22 47 47 H 1.48497 * 110.00093 * 59.99994 * 25 23 22 48 48 H 1.07999 * 119.75198 * 179.97438 * 26 22 21 49 49 H 1.07998 * 119.65706 * 0.04660 * 27 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2114 0.0000 4 6 3.4386 1.2874 0.0005 5 8 4.4141 0.3573 0.0022 6 6 5.6316 0.9386 0.0026 7 6 6.9131 0.2185 0.0048 8 8 7.9595 0.8389 0.0054 9 7 6.9287 -1.1293 0.0061 10 6 8.2058 -1.8470 0.0077 11 1 8.9354 -1.2918 -0.5817 12 6 8.7108 -1.9860 1.4453 13 6 7.6866 -2.7654 2.2726 14 6 7.4912 -4.1555 1.6642 15 1 8.4414 -4.6895 1.6654 16 6 6.4665 -4.9347 2.4911 17 8 6.9883 -5.1655 3.8013 18 6 6.9861 -4.0165 0.2266 19 6 8.0102 -3.2371 -0.6007 20 6 5.4944 2.2898 0.0065 21 6 4.0554 2.5510 0.0000 22 6 3.2765 3.7117 -0.0006 23 6 3.9381 5.0656 -0.0017 24 8 4.4609 5.3415 1.2992 25 14 2.6862 6.3682 -0.4568 26 6 1.9136 3.6151 -0.0011 27 6 1.2957 2.3726 0.0005 28 1 -0.3634 0.5138 0.8900 29 1 -0.3634 0.5139 -0.8899 30 1 -0.3633 -1.0277 0.0005 31 1 6.0942 -1.6239 0.0052 32 1 9.6613 -2.5196 1.4465 33 1 8.8501 -0.9956 1.8788 34 1 6.7365 -2.2313 2.2713 35 1 8.0467 -2.8647 3.2967 36 1 5.5442 -4.3583 2.5637 37 1 6.2610 -5.8901 2.0085 38 1 6.3903 -5.6554 4.3822 39 1 6.0358 -3.4825 0.2254 40 1 6.8472 -5.0069 -0.2070 41 1 7.6506 -3.1385 -1.6250 42 1 8.9604 -3.7712 -0.5995 43 1 6.2874 3.0230 0.0115 44 1 4.7503 5.0726 -0.7287 45 1 4.9023 6.1989 1.3721 46 1 2.1582 6.1106 -1.8207 47 1 1.5736 6.3690 0.5267 48 1 1.3127 4.5125 -0.0011 49 1 0.2174 2.3119 0.0017 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207534_6672420.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:53 Heat of formation + Delta-G solvation = -121.905813 kcal Electronic energy + Delta-G solvation = -33369.788069 eV Core-core repulsion = 28844.272930 eV Total energy + Delta-G solvation = -4525.515139 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.165 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -43.65535 -41.32297 -40.62701 -39.41584 -38.97143 -37.49724 -37.08807 -34.85732 -33.56109 -32.18527 -31.86872 -31.71999 -30.71087 -28.70688 -26.66810 -26.21237 -24.93523 -23.97191 -23.72749 -22.28833 -21.99547 -21.60298 -20.25862 -19.81232 -18.86930 -18.50955 -18.43522 -18.23024 -17.62949 -17.12474 -16.93498 -16.71070 -16.48554 -16.34100 -15.99849 -15.80688 -15.46479 -15.41454 -14.89535 -14.79036 -14.69710 -14.46001 -14.25574 -14.00258 -13.97536 -13.93783 -13.52355 -13.39083 -13.25247 -13.17790 -13.03136 -12.63868 -12.51264 -12.43859 -12.21004 -12.09285 -11.89631 -11.61638 -11.37504 -11.32418 -11.15286 -10.92995 -10.86614 -10.33174 -10.15603 -9.75919 -8.99259 -5.02269 -0.57359 0.10629 0.73419 1.21125 1.31319 1.59494 1.90169 1.97348 2.07340 2.11276 2.37662 3.16190 3.20825 3.38135 3.53667 3.60753 3.66808 3.68017 3.82135 3.84781 3.97610 3.98975 4.01652 4.06977 4.07387 4.15971 4.19146 4.32739 4.34648 4.39567 4.40641 4.43291 4.45423 4.47915 4.56825 4.62942 4.69967 4.81906 4.86539 4.92661 4.99686 5.03630 5.06420 5.07477 5.21803 5.24216 5.29959 5.37870 5.39313 5.46633 5.64298 6.15088 6.38742 6.61761 6.67038 6.99761 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.310 6.310 3 C 0.151 3.849 4 C 0.047 3.953 5 O -0.173 6.173 6 C -0.023 4.023 7 C 0.602 3.398 8 O -0.509 6.509 9 N -0.709 5.709 10 C 0.144 3.856 11 H 0.095 0.905 12 C -0.132 4.132 13 C -0.110 4.110 14 C -0.088 4.088 15 H 0.081 0.919 16 C 0.078 3.922 17 O -0.573 6.573 18 C -0.117 4.117 19 C -0.126 4.126 20 C -0.103 4.103 21 C -0.081 4.081 22 C -0.051 4.051 23 C -0.071 4.071 24 O -0.542 6.542 25 Si 0.686 3.314 26 C -0.097 4.097 27 C -0.178 4.178 28 H 0.060 0.940 29 H 0.060 0.940 30 H 0.106 0.894 31 H 0.406 0.594 32 H 0.077 0.923 33 H 0.071 0.929 34 H 0.059 0.941 35 H 0.072 0.928 36 H 0.045 0.955 37 H 0.045 0.955 38 H 0.380 0.620 39 H 0.062 0.938 40 H 0.072 0.928 41 H 0.074 0.926 42 H 0.085 0.915 43 H 0.175 0.825 44 H 0.075 0.925 45 H 0.383 0.617 46 H -0.253 1.253 47 H -0.249 1.249 48 H 0.133 0.867 49 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.770 0.172 -1.653 4.120 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.223 6.223 3 C 0.105 3.895 4 C -0.002 4.002 5 O -0.075 6.075 6 C -0.073 4.073 7 C 0.387 3.613 8 O -0.386 6.386 9 N -0.361 5.361 10 C 0.040 3.960 11 H 0.113 0.887 12 C -0.171 4.171 13 C -0.148 4.148 14 C -0.107 4.107 15 H 0.099 0.901 16 C 0.001 3.999 17 O -0.378 6.378 18 C -0.155 4.155 19 C -0.164 4.164 20 C -0.124 4.124 21 C -0.082 4.082 22 C -0.052 4.052 23 C -0.181 4.181 24 O -0.349 6.349 25 Si 0.587 3.413 26 C -0.114 4.114 27 C -0.197 4.197 28 H 0.079 0.921 29 H 0.079 0.921 30 H 0.125 0.875 31 H 0.242 0.758 32 H 0.095 0.905 33 H 0.090 0.910 34 H 0.078 0.922 35 H 0.091 0.909 36 H 0.063 0.937 37 H 0.064 0.936 38 H 0.227 0.773 39 H 0.081 0.919 40 H 0.090 0.910 41 H 0.093 0.907 42 H 0.103 0.897 43 H 0.192 0.808 44 H 0.093 0.907 45 H 0.230 0.770 46 H -0.178 1.178 47 H -0.174 1.174 48 H 0.151 0.849 49 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -3.542 -0.012 -2.020 4.077 hybrid contribution -1.138 -0.925 0.232 1.485 sum -4.680 -0.936 -1.788 5.097 Atomic orbital electron populations 1.23193 0.77337 1.04771 1.01795 1.86166 1.22143 1.25574 1.88402 1.17688 0.86508 0.85784 0.99495 1.18735 0.87427 0.86926 1.07064 1.84047 1.12673 1.34655 1.76116 1.22045 0.83930 0.92630 1.08709 1.16608 0.85302 0.82278 0.77074 1.90911 1.30212 1.67472 1.50010 1.46054 1.10615 1.05484 1.73957 1.21102 0.85025 0.92489 0.97370 0.88723 1.21956 0.99166 1.01356 0.94606 1.21497 0.99369 0.94203 0.99694 1.21179 0.99406 0.96503 0.93581 0.90081 1.22232 0.95910 0.98281 0.83511 1.86476 1.47678 1.79423 1.24232 1.21545 0.98616 1.00857 0.94438 1.21818 1.00936 0.94278 0.99343 1.22701 0.94530 0.94364 1.00775 1.19398 0.92819 0.91943 1.04057 1.18441 0.92228 0.92353 1.02178 1.24664 1.05107 0.99228 0.89100 1.86524 1.77860 1.41974 1.28523 0.95137 0.79522 0.86721 0.79917 1.20413 0.93504 0.97439 1.00089 1.20917 1.00366 0.90443 1.07934 0.92112 0.92128 0.87545 0.75753 0.90481 0.91042 0.92234 0.90917 0.93720 0.93635 0.77301 0.91923 0.90978 0.90726 0.89656 0.80785 0.90706 0.76961 1.17766 1.17372 0.84940 0.83481 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 9.81 101.05 0.99 0.95 16 2 O -0.31 -0.74 10.50 -19.62 -0.21 -0.94 16 3 C 0.15 0.48 6.70 -39.12 -0.26 0.22 16 4 C 0.05 0.21 7.35 -38.24 -0.28 -0.07 16 5 O -0.17 -0.73 10.28 2.66 0.03 -0.70 16 6 C -0.02 -0.09 7.07 -36.90 -0.26 -0.35 16 7 C 0.60 2.20 7.76 -12.71 -0.10 2.10 16 8 O -0.51 -3.15 16.49 5.23 0.09 -3.06 16 9 N -0.71 -0.76 4.23 -55.01 -0.23 -0.99 16 10 C 0.14 0.03 2.78 -67.93 -0.19 -0.15 16 11 H 0.09 0.12 7.58 -51.93 -0.39 -0.28 16 12 C -0.13 -0.10 5.60 -26.73 -0.15 -0.25 16 13 C -0.11 -0.09 4.94 -26.74 -0.13 -0.22 16 14 C -0.09 0.03 2.43 -90.62 -0.22 -0.19 16 15 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 16 C 0.08 -0.03 6.43 37.16 0.24 0.21 16 17 O -0.57 -0.59 13.19 -35.23 -0.46 -1.05 16 18 C -0.12 0.20 5.03 -26.73 -0.13 0.07 16 19 C -0.13 0.21 5.61 -26.73 -0.15 0.06 16 20 C -0.10 -0.39 10.68 -37.23 -0.40 -0.78 16 21 C -0.08 -0.34 6.16 -105.21 -0.65 -0.99 16 22 C -0.05 -0.16 5.30 -104.63 -0.55 -0.71 16 23 C -0.07 -0.03 2.70 36.00 0.10 0.06 16 24 O -0.54 -0.40 12.86 -35.23 -0.45 -0.86 16 25 Si 0.69 -0.85 30.20 -169.99 -5.13 -5.98 16 26 C -0.10 -0.22 8.62 -39.97 -0.34 -0.57 16 27 C -0.18 -0.28 9.03 -39.38 -0.36 -0.63 16 28 H 0.06 -0.17 7.66 -51.93 -0.40 -0.57 16 29 H 0.06 -0.18 7.66 -51.93 -0.40 -0.57 16 30 H 0.11 -0.36 8.14 -51.93 -0.42 -0.79 16 31 H 0.41 -0.03 6.58 -40.82 -0.27 -0.30 16 32 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 33 H 0.07 0.18 8.14 -51.93 -0.42 -0.24 16 34 H 0.06 0.08 7.60 -51.93 -0.39 -0.31 16 35 H 0.07 0.17 7.82 -51.93 -0.41 -0.24 16 36 H 0.04 -0.03 8.14 -51.93 -0.42 -0.45 16 37 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 38 H 0.38 -1.13 9.12 45.56 0.42 -0.71 16 39 H 0.06 -0.12 6.51 -51.93 -0.34 -0.45 16 40 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 41 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 42 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 43 H 0.17 0.43 8.06 -52.48 -0.42 0.01 16 44 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 45 H 0.38 -1.68 8.74 45.56 0.40 -1.28 16 46 H -0.25 -0.30 7.11 56.52 0.40 0.10 16 47 H -0.25 -0.31 6.75 56.52 0.38 0.07 16 48 H 0.13 0.14 4.85 -52.49 -0.25 -0.11 16 49 H 0.15 -0.20 6.26 -52.49 -0.33 -0.53 16 LS Contribution 395.28 15.07 5.96 5.96 Total: 0.00 -9.59 395.28 -9.49 -19.09 By element: Atomic # 1 Polarization: -3.99 SS G_CDS: -6.22 Total: -10.21 kcal Atomic # 6 Polarization: 1.60 SS G_CDS: -2.85 Total: -1.25 kcal Atomic # 7 Polarization: -0.76 SS G_CDS: -0.23 Total: -0.99 kcal Atomic # 8 Polarization: -5.60 SS G_CDS: -1.01 Total: -6.61 kcal Atomic # 14 Polarization: -0.85 SS G_CDS: -5.13 Total: -5.98 kcal Total LS contribution 5.96 Total: 5.96 kcal Total: -9.59 -9.49 -19.09 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_6672420.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -102.817 kcal (2) G-P(sol) polarization free energy of solvation -9.594 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -112.411 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.495 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.089 kcal (6) G-S(sol) free energy of system = (1) + (5) -121.906 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds