Wall clock time and date at job start Tue Mar 9 2021 12:53:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86310 * 109.47036 * 2 1 4 4 C 1.50699 * 109.47333 * 119.99790 * 2 1 3 5 5 C 1.34236 * 126.49951 * 255.36265 * 4 2 1 6 6 N 1.36837 * 109.93676 * 180.13062 * 5 4 2 7 7 C 1.46497 * 125.06798 * 179.81246 * 6 5 4 8 8 C 1.50701 * 109.47198 * 264.69963 * 7 6 5 9 9 O 1.21275 * 119.99632 * 359.97438 * 8 7 6 10 10 N 1.34768 * 119.99945 * 179.97438 * 8 7 6 11 11 C 1.46500 * 120.00085 * 179.97438 * 10 8 7 12 12 H 1.09002 * 109.47129 * 325.00582 * 11 10 8 13 13 C 1.53002 * 109.47089 * 85.00503 * 11 10 8 14 14 C 1.52996 * 109.46972 * 59.99956 * 13 11 10 15 15 C 1.52997 * 109.47131 * 60.00459 * 14 13 11 16 16 H 1.08993 * 109.47194 * 60.00154 * 15 14 13 17 17 C 1.53006 * 109.46943 * 179.97438 * 15 14 13 18 18 O 1.42897 * 109.47254 * 294.99971 * 17 15 14 19 19 C 1.52999 * 109.46991 * 299.99311 * 15 14 13 20 20 C 1.52997 * 109.47473 * 205.00325 * 11 10 8 21 21 C 1.37697 * 109.87496 * 359.54796 * 6 5 4 22 22 C 1.39081 * 133.51884 * 180.28455 * 21 6 5 23 23 C 1.37787 * 119.77873 * 179.97438 * 22 21 6 24 24 C 1.38786 * 120.66923 * 359.97438 * 23 22 21 25 25 C 1.36661 * 120.52748 * 0.04244 * 24 23 22 26 26 C 1.39592 * 119.76513 * 359.95967 * 25 24 23 27 27 H 0.96702 * 114.00295 * 300.00076 * 1 2 3 28 28 H 1.08996 * 109.47352 * 240.00262 * 2 1 3 29 29 H 1.48496 * 109.99955 * 178.68021 * 3 2 1 30 30 H 1.48498 * 109.99836 * 299.99773 * 3 2 1 31 31 H 1.07999 * 125.03526 * 359.96688 * 5 4 2 32 32 H 1.08996 * 109.47607 * 144.69337 * 7 6 5 33 33 H 1.09009 * 109.46532 * 24.69510 * 7 6 5 34 34 H 0.97006 * 120.00285 * 0.02562 * 10 8 7 35 35 H 1.08996 * 109.47407 * 180.02562 * 13 11 10 36 36 H 1.09000 * 109.46986 * 300.00214 * 13 11 10 37 37 H 1.09001 * 109.46993 * 180.02562 * 14 13 11 38 38 H 1.09000 * 109.47380 * 299.99696 * 14 13 11 39 39 H 1.09001 * 109.47164 * 55.00166 * 17 15 14 40 40 H 1.08998 * 109.46741 * 174.99515 * 17 15 14 41 41 H 0.96702 * 113.99667 * 179.97438 * 18 17 15 42 42 H 1.08993 * 109.47839 * 300.00447 * 19 15 14 43 43 H 1.09000 * 109.47160 * 180.02562 * 19 15 14 44 44 H 1.09001 * 109.47502 * 180.02562 * 20 11 10 45 45 H 1.09001 * 109.47289 * 60.00327 * 20 11 10 46 46 H 1.08002 * 120.10891 * 359.95302 * 22 21 6 47 47 H 1.08008 * 119.66453 * 180.02562 * 23 22 21 48 48 H 1.08001 * 119.73640 * 180.02562 * 24 23 22 49 49 H 1.08002 * 120.11613 * 179.97438 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7566 0.0000 4 6 1.9314 -0.7103 1.2305 5 6 2.4546 -0.1371 2.3257 6 7 2.8016 -1.0988 3.2352 7 6 3.4055 -0.8402 4.5446 8 6 4.9039 -0.9623 4.4397 9 8 5.4167 -1.2386 3.3760 10 7 5.6739 -0.7644 5.5278 11 6 7.1305 -0.8837 5.4260 12 1 7.3818 -1.6690 4.7130 13 6 7.7190 0.4456 4.9490 14 6 7.3662 1.5478 5.9498 15 6 7.9463 1.1962 7.3211 16 1 9.0300 1.1076 7.2453 17 6 7.5941 2.2988 8.3218 18 8 8.2402 3.5143 7.9383 19 6 7.3579 -0.1330 7.7982 20 6 7.7106 -1.2353 6.7974 21 6 2.4931 -2.3456 2.7388 22 6 2.6277 -3.6360 3.2398 23 6 2.2141 -4.7105 2.4830 24 6 1.6631 -4.5192 1.2236 25 6 1.5219 -3.2600 0.7117 26 6 1.9342 -2.1569 1.4613 27 1 -0.3934 0.4417 0.7650 28 1 1.7923 -0.5138 -0.8900 29 1 3.5345 1.7704 0.0321 30 1 1.5615 2.4679 -1.2085 31 1 2.5851 0.9257 2.4670 32 1 3.0315 -1.5657 5.2669 33 1 3.1451 0.1663 4.8723 34 1 5.2637 -0.5438 6.3787 35 1 8.8026 0.3568 4.8728 36 1 7.3057 0.6962 3.9720 37 1 7.7850 2.4950 5.6097 38 1 6.2825 1.6366 6.0255 39 1 6.5145 2.4488 8.3320 40 1 7.9298 2.0071 9.3169 41 1 8.0608 4.2585 8.5292 42 1 6.2742 -0.0444 7.8740 43 1 7.7708 -0.3833 8.7754 44 1 8.7944 -1.3236 6.7217 45 1 7.2915 -2.1824 7.1373 46 1 3.0552 -3.7953 4.2188 47 1 2.3190 -5.7119 2.8740 48 1 1.3435 -5.3722 0.6434 49 1 1.0926 -3.1187 -0.2692 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207534_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:13 Heat of formation + Delta-G solvation = -56.953421 kcal Electronic energy + Delta-G solvation = -30794.107579 eV Core-core repulsion = 26687.809841 eV Total energy + Delta-G solvation = -4106.297738 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.177 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -42.47753 -41.29342 -39.56825 -37.99019 -37.68244 -37.38019 -34.90276 -34.02661 -32.04987 -31.92389 -31.07493 -30.10266 -28.82685 -26.57374 -25.61130 -23.84858 -23.67063 -22.86559 -22.24783 -21.90666 -20.57006 -20.31624 -18.80655 -18.43131 -18.31885 -17.65008 -17.24458 -16.75865 -16.71494 -16.31243 -16.19056 -15.98646 -15.82364 -15.38286 -15.33507 -15.14431 -14.87238 -14.69682 -14.55795 -14.34791 -14.04627 -13.90917 -13.75376 -13.53389 -13.35247 -13.24239 -13.16556 -12.60560 -12.57615 -12.44307 -12.32040 -12.10132 -11.99553 -11.71934 -11.66211 -11.46988 -11.25570 -11.05230 -10.97511 -10.40260 -10.20926 -10.16743 -9.00851 -8.51093 -5.01255 0.29173 0.80937 1.39878 1.43931 1.46682 1.68273 1.79963 2.08435 2.16092 3.05564 3.12907 3.44044 3.48805 3.54274 3.58045 3.66673 3.75289 3.78013 3.82785 3.87116 3.88747 4.08050 4.08779 4.22316 4.28745 4.30030 4.32462 4.35974 4.38391 4.45819 4.52599 4.59364 4.59697 4.72634 4.81090 4.82784 4.88758 4.91714 4.94690 4.96866 5.00080 5.14063 5.26612 5.27580 5.28999 5.40634 5.65809 5.82164 5.87678 5.91324 6.18790 6.34045 6.39122 6.57184 6.76992 7.05561 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.028 4.028 3 Si 0.681 3.319 4 C -0.198 4.198 5 C 0.069 3.931 6 N -0.465 5.465 7 C 0.091 3.909 8 C 0.490 3.510 9 O -0.514 6.514 10 N -0.721 5.721 11 C 0.147 3.853 12 H 0.089 0.911 13 C -0.132 4.132 14 C -0.107 4.107 15 C -0.090 4.090 16 H 0.080 0.920 17 C 0.079 3.921 18 O -0.573 6.573 19 C -0.114 4.114 20 C -0.126 4.126 21 C 0.109 3.891 22 C -0.128 4.128 23 C -0.097 4.097 24 C -0.146 4.146 25 C -0.066 4.066 26 C -0.087 4.087 27 H 0.376 0.624 28 H 0.111 0.889 29 H -0.256 1.256 30 H -0.254 1.254 31 H 0.171 0.829 32 H 0.117 0.883 33 H 0.122 0.878 34 H 0.399 0.601 35 H 0.074 0.926 36 H 0.068 0.932 37 H 0.071 0.929 38 H 0.058 0.942 39 H 0.044 0.956 40 H 0.045 0.955 41 H 0.381 0.619 42 H 0.061 0.939 43 H 0.071 0.929 44 H 0.082 0.918 45 H 0.073 0.927 46 H 0.114 0.886 47 H 0.125 0.875 48 H 0.122 0.878 49 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.928 2.471 9.300 9.667 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.140 4.140 3 Si 0.583 3.417 4 C -0.205 4.205 5 C -0.056 4.056 6 N -0.149 5.149 7 C -0.035 4.035 8 C 0.274 3.726 9 O -0.387 6.387 10 N -0.375 5.375 11 C 0.042 3.958 12 H 0.107 0.893 13 C -0.170 4.170 14 C -0.144 4.144 15 C -0.108 4.108 16 H 0.098 0.902 17 C 0.001 3.999 18 O -0.378 6.378 19 C -0.152 4.152 20 C -0.164 4.164 21 C 0.005 3.995 22 C -0.148 4.148 23 C -0.116 4.116 24 C -0.165 4.165 25 C -0.084 4.084 26 C -0.091 4.091 27 H 0.223 0.777 28 H 0.128 0.872 29 H -0.180 1.180 30 H -0.179 1.179 31 H 0.187 0.813 32 H 0.135 0.865 33 H 0.140 0.860 34 H 0.235 0.765 35 H 0.092 0.908 36 H 0.087 0.913 37 H 0.090 0.910 38 H 0.077 0.923 39 H 0.062 0.938 40 H 0.064 0.936 41 H 0.228 0.772 42 H 0.080 0.920 43 H 0.089 0.911 44 H 0.101 0.899 45 H 0.092 0.908 46 H 0.132 0.868 47 H 0.142 0.858 48 H 0.140 0.860 49 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges 0.386 2.257 7.333 7.682 hybrid contribution -0.121 -0.155 0.923 0.944 sum 0.266 2.102 8.256 8.524 Atomic orbital electron populations 1.86501 1.17529 1.81760 1.48902 1.24321 0.84601 1.08721 0.96313 0.95432 0.81047 0.77572 0.87684 1.20624 1.10198 0.92372 0.97340 1.21500 1.00930 0.93818 0.89314 1.43192 1.52459 1.04629 1.14587 1.21596 0.90962 1.05771 0.85205 1.20994 0.89450 0.77543 0.84608 1.90814 1.74575 1.45648 1.27712 1.46083 1.07316 1.72240 1.11885 1.20979 0.78754 0.98279 0.97749 0.89283 1.21936 1.01280 0.94495 0.99339 1.21465 1.00402 0.98743 0.93796 1.21190 1.01633 0.93039 0.94948 0.90155 1.22222 0.95730 0.85024 0.96890 1.86483 1.74491 1.20706 1.56143 1.21517 1.00606 0.93949 0.99091 1.21815 1.02180 0.98645 0.93747 1.18159 1.01168 0.85860 0.94330 1.19948 1.04992 0.89268 1.00621 1.20820 0.98393 0.97923 0.94488 1.20666 1.02482 0.96925 0.96422 1.20307 0.98011 0.90964 0.99163 1.18946 1.03390 0.92819 0.93939 0.77738 0.87181 1.18049 1.17891 0.81254 0.86533 0.85979 0.76533 0.90786 0.91328 0.91047 0.92320 0.93765 0.93638 0.77226 0.92005 0.91054 0.89906 0.90845 0.86771 0.85750 0.85951 0.85993 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.97 12.88 -35.23 -0.45 -1.42 16 2 C -0.03 -0.05 3.06 36.01 0.11 0.06 16 3 Si 0.68 0.07 30.76 -169.99 -5.23 -5.16 16 4 C -0.20 -0.53 5.57 -102.71 -0.57 -1.10 16 5 C 0.07 0.06 9.89 -16.73 -0.17 -0.11 16 6 N -0.47 -0.61 2.27 -115.71 -0.26 -0.87 16 7 C 0.09 -0.22 6.48 -5.19 -0.03 -0.26 16 8 C 0.49 0.08 7.86 -10.99 -0.09 -0.01 16 9 O -0.51 -2.81 16.08 5.56 0.09 -2.72 16 10 N -0.72 1.81 4.23 -53.81 -0.23 1.59 16 11 C 0.15 -0.19 2.78 -67.93 -0.19 -0.38 16 12 H 0.09 0.09 7.58 -51.93 -0.39 -0.30 16 13 C -0.13 0.06 5.60 -26.73 -0.15 -0.09 16 14 C -0.11 0.13 4.94 -26.73 -0.13 0.00 16 15 C -0.09 0.19 2.43 -90.62 -0.22 -0.03 16 16 H 0.08 -0.06 8.14 -51.93 -0.42 -0.49 16 17 C 0.08 -0.18 6.43 37.16 0.24 0.06 16 18 O -0.57 0.30 13.19 -35.23 -0.46 -0.16 16 19 C -0.11 0.44 5.03 -26.73 -0.13 0.31 16 20 C -0.13 0.40 5.61 -26.73 -0.15 0.25 16 21 C 0.11 0.40 6.80 -83.98 -0.57 -0.17 16 22 C -0.13 -0.36 10.00 -39.43 -0.39 -0.75 16 23 C -0.10 -0.24 10.01 -39.54 -0.40 -0.64 16 24 C -0.15 -0.44 9.97 -39.95 -0.40 -0.83 16 25 C -0.07 -0.27 10.05 -39.65 -0.40 -0.67 16 26 C -0.09 -0.39 6.35 -105.14 -0.67 -1.06 16 27 H 0.38 -0.89 8.70 45.56 0.40 -0.49 16 28 H 0.11 0.31 7.96 -51.93 -0.41 -0.11 16 29 H -0.26 -0.83 7.11 56.52 0.40 -0.43 16 30 H -0.25 -0.81 7.11 56.52 0.40 -0.41 16 31 H 0.17 -0.46 6.35 -52.49 -0.33 -0.79 16 32 H 0.12 -0.53 8.14 -51.93 -0.42 -0.95 16 33 H 0.12 -0.72 8.12 -51.92 -0.42 -1.14 16 34 H 0.40 -2.11 6.87 -40.82 -0.28 -2.39 16 35 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 36 H 0.07 0.12 8.14 -51.93 -0.42 -0.30 16 37 H 0.07 0.05 7.82 -51.93 -0.41 -0.36 16 38 H 0.06 -0.11 7.60 -51.93 -0.39 -0.50 16 39 H 0.04 -0.15 8.14 -51.93 -0.42 -0.57 16 40 H 0.05 -0.13 8.14 -51.93 -0.42 -0.56 16 41 H 0.38 -1.70 9.12 45.56 0.42 -1.29 16 42 H 0.06 -0.31 6.50 -51.93 -0.34 -0.65 16 43 H 0.07 -0.29 8.14 -51.93 -0.42 -0.71 16 44 H 0.08 -0.24 8.14 -51.93 -0.42 -0.67 16 45 H 0.07 -0.25 8.14 -51.93 -0.42 -0.68 16 46 H 0.11 0.09 8.06 -52.49 -0.42 -0.33 16 47 H 0.12 0.03 8.06 -52.48 -0.42 -0.39 16 48 H 0.12 0.13 8.06 -52.49 -0.42 -0.30 16 49 H 0.12 0.39 8.06 -52.49 -0.42 -0.03 16 LS Contribution 394.64 15.07 5.95 5.95 Total: 0.00 -11.72 394.64 -11.77 -23.50 By element: Atomic # 1 Polarization: -8.41 SS G_CDS: -6.86 Total: -15.28 kcal Atomic # 6 Polarization: -1.12 SS G_CDS: -4.31 Total: -5.43 kcal Atomic # 7 Polarization: 1.21 SS G_CDS: -0.49 Total: 0.72 kcal Atomic # 8 Polarization: -3.47 SS G_CDS: -0.83 Total: -4.30 kcal Atomic # 14 Polarization: 0.07 SS G_CDS: -5.23 Total: -5.16 kcal Total LS contribution 5.95 Total: 5.95 kcal Total: -11.72 -11.77 -23.50 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -33.456 kcal (2) G-P(sol) polarization free energy of solvation -11.723 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -45.179 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.774 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.498 kcal (6) G-S(sol) free energy of system = (1) + (5) -56.953 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds