Wall clock time and date at job start Tue Mar 9 2021 12:53:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.36772 * 125.80198 * 2 1 4 4 C 1.47256 * 126.94170 * 359.97438 * 3 2 1 5 5 O 1.21631 * 120.00145 * 359.70632 * 4 3 2 6 6 N 1.34773 * 120.00169 * 179.71346 * 4 3 2 7 7 C 1.46506 * 120.00361 * 179.97438 * 6 4 3 8 8 H 1.08996 * 109.46660 * 325.00382 * 7 6 4 9 9 C 1.52999 * 109.46684 * 84.99594 * 7 6 4 10 10 C 1.53005 * 109.47159 * 60.00602 * 9 7 6 11 11 C 1.52997 * 109.47452 * 59.99536 * 10 9 7 12 12 H 1.09002 * 109.46695 * 59.99734 * 11 10 9 13 13 C 1.52997 * 109.47232 * 179.97438 * 11 10 9 14 14 O 1.42892 * 109.47178 * 295.00054 * 13 11 10 15 15 C 1.53002 * 109.46817 * 300.00239 * 11 10 9 16 16 C 1.52997 * 109.47289 * 204.99667 * 7 6 4 17 17 C 1.46688 * 106.11384 * 179.71310 * 3 2 1 18 18 C 1.34490 * 106.33427 * 0.26277 * 17 3 2 19 19 C 1.50694 * 125.57061 * 179.97438 * 18 17 3 20 20 O 1.42907 * 109.46955 * 299.99768 * 19 18 17 21 21 Si 1.86302 * 109.47018 * 179.97438 * 19 18 17 22 22 N 1.34659 * 125.80170 * 180.16210 * 2 1 3 23 23 H 1.09002 * 109.47309 * 89.99992 * 1 2 3 24 24 H 1.09005 * 109.47381 * 209.99951 * 1 2 3 25 25 H 1.09000 * 109.47393 * 330.00142 * 1 2 3 26 26 H 0.97004 * 120.00228 * 359.97438 * 6 4 3 27 27 H 1.09000 * 109.47486 * 300.00065 * 9 7 6 28 28 H 1.09002 * 109.46716 * 180.02562 * 9 7 6 29 29 H 1.09002 * 109.46935 * 299.99411 * 10 9 7 30 30 H 1.09001 * 109.46812 * 179.97438 * 10 9 7 31 31 H 1.09000 * 109.46818 * 55.00071 * 13 11 10 32 32 H 1.09001 * 109.47096 * 174.99967 * 13 11 10 33 33 H 0.96703 * 114.00148 * 179.97438 * 14 13 11 34 34 H 1.08992 * 109.47063 * 299.99823 * 15 11 10 35 35 H 1.09004 * 109.46733 * 179.97438 * 15 11 10 36 36 H 1.09002 * 109.47153 * 179.97438 * 16 7 6 37 37 H 1.09001 * 109.46832 * 60.00146 * 16 7 6 38 38 H 1.08000 * 126.83410 * 180.22321 * 17 3 2 39 39 H 1.08996 * 109.47578 * 59.99842 * 19 18 17 40 40 H 0.96707 * 113.99655 * 180.02562 * 20 19 18 41 41 H 1.48504 * 109.99933 * 59.99874 * 21 19 18 42 42 H 1.48504 * 109.99971 * 181.31769 * 21 19 18 43 43 H 0.96997 * 124.85061 * 0.02562 * 22 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3071 1.1093 0.0000 4 6 1.8703 2.5156 -0.0005 5 8 0.6839 2.7839 -0.0064 6 7 2.7849 3.5053 0.0054 7 6 2.3504 4.9045 0.0043 8 1 1.4419 5.0022 -0.5900 9 6 2.0711 5.3528 1.4402 10 6 3.3463 5.2155 2.2745 11 6 4.4469 6.0909 1.6718 12 1 4.1235 7.1319 1.6710 13 6 5.7218 5.9541 2.5064 14 8 5.4935 6.4813 3.8148 15 6 4.7261 5.6425 0.2358 16 6 3.4509 5.7799 -0.5984 17 6 3.6882 0.6151 0.0071 18 6 3.6095 -0.7275 0.0048 19 6 4.7819 -1.6743 0.0095 20 8 5.5817 -1.4478 -1.1530 21 14 4.1614 -3.4310 0.0046 22 7 2.2947 -1.0921 -0.0031 23 1 -0.3634 0.0000 -1.0277 24 1 -0.3634 -0.8900 0.5138 25 1 -0.3634 0.8900 0.5138 26 1 3.7311 3.2914 0.0104 27 1 1.2871 4.7291 1.8697 28 1 1.7474 6.3936 1.4394 29 1 3.6697 4.1746 2.2753 30 1 3.1475 5.5353 3.2974 31 1 5.9958 4.9018 2.5814 32 1 6.5304 6.5069 2.0280 33 1 6.2612 6.4271 4.4002 34 1 5.0494 4.6016 0.2367 35 1 5.5099 6.2665 -0.1937 36 1 3.1274 6.8208 -0.5996 37 1 3.6498 5.4604 -1.6214 38 1 4.5890 1.2108 0.0123 39 1 5.3828 -1.5041 0.9027 40 1 6.3558 -2.0240 -1.2161 41 1 3.3403 -3.6762 -1.2082 42 1 5.3076 -4.3745 0.0412 43 1 1.9734 -2.0073 -0.0060 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207534_9865296.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:16 Heat of formation + Delta-G solvation = -86.368908 kcal Electronic energy + Delta-G solvation = -24675.494239 eV Core-core repulsion = 21108.136990 eV Total energy + Delta-G solvation = -3567.357249 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.162 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -42.41207 -40.85958 -39.07218 -37.95862 -37.34945 -34.57791 -32.84246 -32.44407 -31.72810 -30.96935 -28.99150 -26.51280 -25.41003 -23.64764 -23.46751 -22.01915 -21.41303 -20.71163 -19.95159 -18.78462 -18.21615 -18.11202 -17.25941 -16.65253 -16.34199 -16.25975 -15.81129 -15.71566 -15.35421 -15.10702 -14.79472 -14.53963 -14.49516 -14.36255 -14.12158 -13.82543 -13.64306 -13.41555 -13.32643 -13.10597 -12.94187 -12.89922 -12.52628 -12.39087 -12.16490 -12.09794 -11.49703 -11.23106 -11.05626 -10.80660 -10.79492 -10.49025 -9.89891 -9.68206 -9.06107 -5.27185 0.86035 0.96975 1.28770 1.32640 1.67917 2.01676 2.55546 2.77852 3.21906 3.26239 3.63742 3.71682 3.78581 3.90601 3.95716 4.08795 4.16515 4.24281 4.29042 4.33826 4.40170 4.49886 4.51975 4.56973 4.59893 4.67335 4.72918 4.75867 4.81837 4.82480 5.02791 5.05321 5.12522 5.17816 5.20594 5.32367 5.40087 5.49271 5.51928 5.75981 5.81892 5.94169 6.24082 6.40647 6.70264 6.83859 7.60804 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.099 4.099 2 C 0.124 3.876 3 C -0.240 4.240 4 C 0.594 3.406 5 O -0.549 6.549 6 N -0.720 5.720 7 C 0.147 3.853 8 H 0.089 0.911 9 C -0.131 4.131 10 C -0.107 4.107 11 C -0.088 4.088 12 H 0.079 0.921 13 C 0.079 3.921 14 O -0.573 6.573 15 C -0.114 4.114 16 C -0.126 4.126 17 C -0.127 4.127 18 C 0.017 3.983 19 C -0.041 4.041 20 O -0.531 6.531 21 Si 0.664 3.336 22 N -0.544 5.544 23 H 0.080 0.920 24 H 0.067 0.933 25 H 0.104 0.896 26 H 0.397 0.603 27 H 0.069 0.931 28 H 0.071 0.929 29 H 0.060 0.940 30 H 0.069 0.931 31 H 0.044 0.956 32 H 0.044 0.956 33 H 0.379 0.621 34 H 0.062 0.938 35 H 0.069 0.931 36 H 0.080 0.920 37 H 0.072 0.928 38 H 0.144 0.856 39 H 0.088 0.912 40 H 0.383 0.617 41 H -0.250 1.250 42 H -0.249 1.249 43 H 0.413 0.587 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.926 -3.112 1.904 5.360 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C 0.006 3.994 3 C -0.250 4.250 4 C 0.383 3.617 5 O -0.429 6.429 6 N -0.372 5.372 7 C 0.043 3.957 8 H 0.107 0.893 9 C -0.169 4.169 10 C -0.145 4.145 11 C -0.107 4.107 12 H 0.097 0.903 13 C 0.001 3.999 14 O -0.378 6.378 15 C -0.152 4.152 16 C -0.164 4.164 17 C -0.151 4.151 18 C -0.091 4.091 19 C -0.152 4.152 20 O -0.338 6.338 21 Si 0.564 3.436 22 N -0.144 5.144 23 H 0.099 0.901 24 H 0.086 0.914 25 H 0.123 0.877 26 H 0.233 0.767 27 H 0.088 0.912 28 H 0.089 0.911 29 H 0.079 0.921 30 H 0.088 0.912 31 H 0.063 0.937 32 H 0.063 0.937 33 H 0.226 0.774 34 H 0.080 0.920 35 H 0.087 0.913 36 H 0.099 0.901 37 H 0.090 0.910 38 H 0.162 0.838 39 H 0.106 0.894 40 H 0.231 0.769 41 H -0.174 1.174 42 H -0.173 1.173 43 H 0.252 0.748 Dipole moment (debyes) X Y Z Total from point charges 2.028 -3.262 1.098 3.995 hybrid contribution 2.265 -0.591 -0.427 2.379 sum 4.292 -3.853 0.671 5.807 Atomic orbital electron populations 1.20649 0.86476 1.04613 1.03840 1.20383 0.93759 0.85133 1.00134 1.20121 0.92914 0.92180 1.19773 1.17293 0.85306 0.83982 0.75103 1.90744 1.16581 1.84363 1.51172 1.45869 1.09672 1.05609 1.76017 1.20916 0.97979 0.80064 0.96757 0.89304 1.21934 0.98117 1.01782 0.95103 1.21469 0.94202 0.99386 0.99430 1.21179 0.94715 1.01176 0.93612 0.90277 1.22234 0.97032 0.97114 0.83503 1.86482 1.41888 1.85259 1.24159 1.21515 0.97864 1.01453 0.94368 1.21808 0.94740 1.00595 0.99260 1.21724 0.95651 0.92493 1.05274 1.19072 0.83271 0.94323 1.12429 1.23972 0.92632 1.07759 0.90852 1.86613 1.41371 1.62397 1.43431 0.95687 0.85730 0.74357 0.87827 1.41628 1.05355 1.08526 1.58879 0.90127 0.91406 0.87711 0.76707 0.91181 0.91070 0.92115 0.91245 0.93745 0.93749 0.77386 0.91969 0.91276 0.90109 0.90956 0.83826 0.89446 0.76864 1.17408 1.17323 0.74766 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.05 9.88 36.01 0.36 0.31 16 2 C 0.12 0.23 7.17 -81.88 -0.59 -0.36 16 3 C -0.24 -0.72 6.29 -103.35 -0.65 -1.37 16 4 C 0.59 2.36 7.77 -12.60 -0.10 2.26 16 5 O -0.55 -3.68 14.48 5.25 0.08 -3.61 16 6 N -0.72 -0.96 4.23 -54.93 -0.23 -1.19 16 7 C 0.15 0.15 2.78 -67.93 -0.19 -0.04 16 8 H 0.09 0.23 7.58 -51.93 -0.39 -0.16 16 9 C -0.13 -0.17 5.60 -26.73 -0.15 -0.32 16 10 C -0.11 -0.10 4.94 -26.73 -0.13 -0.23 16 11 C -0.09 0.02 2.43 -90.62 -0.22 -0.20 16 12 H 0.08 0.06 8.14 -51.93 -0.42 -0.36 16 13 C 0.08 -0.04 6.43 37.16 0.24 0.20 16 14 O -0.57 -0.49 13.19 -35.23 -0.46 -0.96 16 15 C -0.11 0.18 5.03 -26.73 -0.13 0.04 16 16 C -0.13 0.12 5.61 -26.73 -0.15 -0.03 16 17 C -0.13 -0.20 10.43 -37.50 -0.39 -0.59 16 18 C 0.02 0.01 6.14 -81.87 -0.50 -0.49 16 19 C -0.04 0.05 2.97 36.00 0.11 0.16 16 20 O -0.53 0.02 12.84 -35.23 -0.45 -0.43 16 21 Si 0.66 -1.59 30.94 -169.99 -5.26 -6.85 16 22 N -0.54 -0.02 5.41 -5.42 -0.03 -0.05 16 23 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 24 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 25 H 0.10 0.25 6.47 -51.93 -0.34 -0.09 16 26 H 0.40 -0.13 5.99 -40.82 -0.24 -0.38 16 27 H 0.07 0.23 8.14 -51.93 -0.42 -0.20 16 28 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 29 H 0.06 0.07 7.60 -51.93 -0.39 -0.33 16 30 H 0.07 0.16 7.82 -51.93 -0.41 -0.24 16 31 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 32 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 33 H 0.38 -1.21 9.12 45.56 0.42 -0.80 16 34 H 0.06 -0.13 6.50 -51.93 -0.34 -0.47 16 35 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 36 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 37 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 38 H 0.14 0.00 7.70 -52.49 -0.40 -0.40 16 39 H 0.09 -0.27 7.96 -51.93 -0.41 -0.69 16 40 H 0.38 -1.59 8.74 45.56 0.40 -1.19 16 41 H -0.25 -0.18 7.11 56.52 0.40 0.22 16 42 H -0.25 0.09 7.11 56.52 0.40 0.49 16 43 H 0.41 -1.06 6.70 -40.82 -0.27 -1.34 16 LS Contribution 342.40 15.07 5.16 5.16 Total: 0.00 -8.86 342.40 -9.52 -18.38 By element: Atomic # 1 Polarization: -3.97 SS G_CDS: -5.81 Total: -9.79 kcal Atomic # 6 Polarization: 1.84 SS G_CDS: -2.50 Total: -0.67 kcal Atomic # 7 Polarization: -0.98 SS G_CDS: -0.26 Total: -1.24 kcal Atomic # 8 Polarization: -4.15 SS G_CDS: -0.84 Total: -4.99 kcal Atomic # 14 Polarization: -1.59 SS G_CDS: -5.26 Total: -6.85 kcal Total LS contribution 5.16 Total: 5.16 kcal Total: -8.86 -9.52 -18.38 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_9865296.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -67.990 kcal (2) G-P(sol) polarization free energy of solvation -8.857 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.848 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.521 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.378 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.369 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds