Wall clock time and date at job start Tue Mar 9 2021 12:53:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.35452 * 125.56691 * 2 1 4 4 C 1.50704 * 126.06423 * 0.29107 * 3 2 1 5 5 O 1.42903 * 109.46830 * 150.02136 * 4 3 2 6 6 Si 1.86296 * 109.47460 * 30.02033 * 4 3 2 7 7 C 1.39834 * 107.86685 * 180.26072 * 3 2 1 8 8 C 1.50702 * 126.45667 * 180.02562 * 7 3 2 9 9 C 1.37871 * 107.08165 * 0.02562 * 7 3 2 10 10 C 1.46678 * 126.22768 * 179.97438 * 9 7 3 11 11 O 1.21697 * 120.00518 * 359.97438 * 10 9 7 12 12 N 1.34781 * 119.99776 * 179.97438 * 10 9 7 13 13 C 1.46498 * 119.99908 * 179.97438 * 12 10 9 14 14 H 1.09004 * 109.47089 * 35.00082 * 13 12 10 15 15 C 1.52999 * 109.47060 * 155.00107 * 13 12 10 16 16 C 1.52997 * 109.47407 * 180.02562 * 15 13 12 17 17 C 1.53006 * 109.47027 * 300.00097 * 16 15 13 18 18 H 1.09004 * 109.47066 * 299.99680 * 17 16 15 19 19 C 1.53000 * 109.47054 * 179.97438 * 17 16 15 20 20 O 1.42903 * 109.47130 * 174.99733 * 19 17 16 21 21 C 1.52999 * 109.47106 * 59.99719 * 17 16 15 22 22 C 1.52995 * 109.47241 * 274.99766 * 13 12 10 23 23 N 1.35535 * 125.56263 * 180.31220 * 2 1 3 24 24 H 1.08996 * 109.47084 * 269.71914 * 1 2 3 25 25 H 1.09010 * 109.46930 * 29.71527 * 1 2 3 26 26 H 1.08998 * 109.47407 * 149.71274 * 1 2 3 27 27 H 1.09001 * 109.46920 * 270.01491 * 4 3 2 28 28 H 0.96700 * 114.00316 * 299.99197 * 5 4 3 29 29 H 1.48498 * 110.00058 * 58.68038 * 6 4 3 30 30 H 1.48500 * 109.99885 * 180.02562 * 6 4 3 31 31 H 1.09005 * 109.46742 * 269.95591 * 8 7 3 32 32 H 1.08995 * 109.46831 * 29.95373 * 8 7 3 33 33 H 1.08996 * 109.46956 * 149.95526 * 8 7 3 34 34 H 0.96998 * 119.99678 * 359.97438 * 12 10 9 35 35 H 1.08999 * 109.46964 * 300.00038 * 15 13 12 36 36 H 1.08999 * 109.47513 * 59.99712 * 15 13 12 37 37 H 1.08999 * 109.47555 * 59.99500 * 16 15 13 38 38 H 1.09000 * 109.47719 * 179.97438 * 16 15 13 39 39 H 1.08996 * 109.47252 * 295.00018 * 19 17 16 40 40 H 1.09005 * 109.47220 * 55.00128 * 19 17 16 41 41 H 0.96696 * 114.00543 * 180.02562 * 20 19 17 42 42 H 1.09004 * 109.47190 * 60.00037 * 21 17 16 43 43 H 1.08999 * 109.46964 * 180.02562 * 21 17 16 44 44 H 1.08995 * 109.47591 * 300.00296 * 22 13 12 45 45 H 1.09007 * 109.46749 * 60.00225 * 22 13 12 46 46 H 0.97004 * 125.67543 * 359.69416 * 23 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2949 1.1018 0.0000 4 6 1.8200 2.5321 0.0062 5 8 2.7803 3.3499 0.6779 6 14 0.1846 2.6397 0.8920 7 6 3.6270 0.6767 -0.0061 8 6 4.8486 1.5592 -0.0077 9 6 3.6121 -0.7019 -0.0102 10 6 4.7859 -1.5815 -0.0177 11 8 5.9049 -1.1031 -0.0211 12 7 4.6252 -2.9197 -0.0206 13 6 5.7975 -3.7982 -0.0286 14 1 6.5959 -3.3441 0.5584 15 6 5.4245 -5.1519 0.5790 16 6 6.6489 -6.0693 0.5713 17 6 7.1263 -6.2706 -0.8684 18 1 6.3282 -6.7249 -1.4556 19 6 8.3511 -7.1874 -0.8760 20 8 8.7265 -7.4695 -2.2257 21 6 7.4993 -4.9169 -1.4760 22 6 6.2742 -3.9995 -1.4684 23 7 2.2953 -1.1025 -0.0060 24 1 -0.3633 -0.0050 1.0276 25 1 -0.3633 0.8926 -0.5095 26 1 -0.3634 -0.8874 -0.5183 27 1 1.7010 2.8798 -1.0200 28 1 2.9370 3.0974 1.5981 29 1 0.3263 2.1385 2.2827 30 1 -0.2948 4.0451 0.9044 31 1 5.1399 1.7744 -1.0358 32 1 4.6236 2.4920 0.5091 33 1 5.6658 1.0492 0.5023 34 1 3.7333 -3.3010 -0.0175 35 1 5.0848 -5.0085 1.6048 36 1 4.6261 -5.6061 -0.0078 37 1 7.4470 -5.6150 1.1585 38 1 6.3833 -7.0335 1.0046 39 1 9.1775 -6.6940 -0.3645 40 1 8.1109 -8.1190 -0.3635 41 1 9.4977 -8.0473 -2.3069 42 1 8.2974 -4.4625 -0.8887 43 1 7.8389 -5.0603 -2.5017 44 1 5.4759 -4.4536 -2.0553 45 1 6.5399 -3.0350 -1.9013 46 1 1.9833 -2.0210 -0.0068 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207542_12297754.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:38 Heat of formation + Delta-G solvation = -93.467034 kcal Electronic energy + Delta-G solvation = -26275.622096 eV Core-core repulsion = 22552.419430 eV Total energy + Delta-G solvation = -3723.202666 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 309.177 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -42.65024 -40.81828 -39.35825 -37.82391 -37.44891 -35.28340 -33.62449 -33.19220 -31.85488 -31.33767 -29.31446 -27.58884 -26.50074 -25.63566 -23.86818 -22.76656 -21.87902 -21.12098 -20.65816 -20.25612 -19.27084 -18.24148 -17.66452 -17.13789 -16.68307 -16.64634 -16.22422 -15.92121 -15.81574 -15.54615 -15.26893 -14.89573 -14.74923 -14.56849 -14.29908 -14.05054 -14.01096 -13.97832 -13.65967 -13.49383 -13.22398 -13.20616 -13.14467 -13.03358 -12.46651 -12.27622 -12.24148 -12.21148 -11.75360 -11.66382 -11.49735 -11.31966 -10.94606 -10.87216 -10.41453 -10.10197 -9.47206 -8.95527 -4.80068 0.44875 1.23646 1.68533 1.70224 1.95635 2.05563 2.12504 2.43899 3.14994 3.44050 3.53322 3.65138 3.70253 3.79589 3.91653 3.92456 4.00684 4.05476 4.18393 4.29221 4.32124 4.37709 4.40210 4.44030 4.47153 4.52925 4.56584 4.66606 4.72875 4.73638 4.76555 4.86016 4.95114 4.97115 5.02668 5.08462 5.18209 5.24283 5.32711 5.38330 5.44272 5.45324 5.54030 5.76348 5.97968 6.30273 6.49171 6.58102 6.65501 7.22375 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.103 4.103 2 C 0.065 3.935 3 C -0.211 4.211 4 C -0.034 4.034 5 O -0.528 6.528 6 Si 0.653 3.347 7 C -0.041 4.041 8 C -0.100 4.100 9 C -0.067 4.067 10 C 0.591 3.409 11 O -0.521 6.521 12 N -0.731 5.731 13 C 0.147 3.853 14 H 0.091 0.909 15 C -0.124 4.124 16 C -0.110 4.110 17 C -0.089 4.089 18 H 0.078 0.922 19 C 0.079 3.921 20 O -0.573 6.573 21 C -0.108 4.108 22 C -0.129 4.129 23 N -0.535 5.535 24 H 0.087 0.913 25 H 0.102 0.898 26 H 0.087 0.913 27 H 0.112 0.888 28 H 0.374 0.626 29 H -0.261 1.261 30 H -0.255 1.255 31 H 0.066 0.934 32 H 0.081 0.919 33 H 0.075 0.925 34 H 0.392 0.608 35 H 0.071 0.929 36 H 0.069 0.931 37 H 0.069 0.931 38 H 0.071 0.929 39 H 0.047 0.953 40 H 0.045 0.955 41 H 0.381 0.619 42 H 0.064 0.936 43 H 0.074 0.926 44 H 0.063 0.937 45 H 0.070 0.930 46 H 0.415 0.585 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.857 -5.983 0.858 7.753 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.158 4.158 2 C -0.053 4.053 3 C -0.218 4.218 4 C -0.144 4.144 5 O -0.334 6.334 6 Si 0.555 3.445 7 C -0.050 4.050 8 C -0.157 4.157 9 C -0.178 4.178 10 C 0.380 3.620 11 O -0.397 6.397 12 N -0.382 5.382 13 C 0.043 3.957 14 H 0.109 0.891 15 C -0.162 4.162 16 C -0.148 4.148 17 C -0.108 4.108 18 H 0.097 0.903 19 C 0.001 3.999 20 O -0.379 6.379 21 C -0.146 4.146 22 C -0.168 4.168 23 N -0.132 5.132 24 H 0.106 0.894 25 H 0.120 0.880 26 H 0.106 0.894 27 H 0.130 0.870 28 H 0.222 0.778 29 H -0.185 1.185 30 H -0.180 1.180 31 H 0.084 0.916 32 H 0.099 0.901 33 H 0.094 0.906 34 H 0.225 0.775 35 H 0.090 0.910 36 H 0.088 0.912 37 H 0.088 0.912 38 H 0.090 0.910 39 H 0.065 0.935 40 H 0.064 0.936 41 H 0.228 0.772 42 H 0.082 0.918 43 H 0.093 0.907 44 H 0.082 0.918 45 H 0.089 0.911 46 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges -4.961 -4.789 0.845 6.947 hybrid contribution 0.849 -1.039 0.812 1.568 sum -4.112 -5.828 1.657 7.322 Atomic orbital electron populations 1.20415 0.87624 1.03687 1.04121 1.20149 0.93395 0.85771 1.06020 1.19549 0.92964 0.94826 1.14419 1.24251 1.01010 0.86861 1.02312 1.86552 1.60794 1.57026 1.28988 0.95560 0.82301 0.83627 0.83061 1.19798 0.94855 0.90684 0.99619 1.20559 0.93858 0.98563 1.02703 1.20137 0.82751 0.94146 1.20779 1.17017 0.87558 0.81254 0.76199 1.90843 1.24133 1.74903 1.49806 1.45975 1.09691 1.05820 1.76703 1.21041 0.88023 0.89468 0.97181 0.89062 1.21776 0.98707 0.94354 1.01394 1.21456 0.97539 0.99746 0.96040 1.21199 0.97194 0.95824 0.96582 0.90320 1.22225 0.96629 0.97724 0.83348 1.86471 1.52442 1.72268 1.26713 1.21493 0.97257 0.93738 1.02075 1.21940 0.98240 1.00497 0.96088 1.41739 1.05341 1.08199 1.57900 0.89428 0.88041 0.89442 0.87028 0.77803 1.18533 1.18016 0.91579 0.90050 0.90622 0.77508 0.91006 0.91243 0.91214 0.91041 0.93522 0.93634 0.77242 0.91771 0.90723 0.91829 0.91146 0.74714 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.49 8.22 36.01 0.30 0.79 16 2 C 0.06 -0.07 6.83 -81.95 -0.56 -0.63 16 3 C -0.21 -0.26 5.38 -105.02 -0.57 -0.83 16 4 C -0.03 -0.02 3.03 36.01 0.11 0.09 16 5 O -0.53 -1.14 10.19 -35.23 -0.36 -1.50 16 6 Si 0.65 -0.47 26.78 -169.99 -4.55 -5.02 16 7 C -0.04 -0.13 6.15 -104.16 -0.64 -0.77 16 8 C -0.10 -0.38 9.51 36.01 0.34 -0.04 16 9 C -0.07 -0.14 7.06 -81.98 -0.58 -0.72 16 10 C 0.59 1.76 7.75 -12.85 -0.10 1.66 16 11 O -0.52 -3.41 14.47 5.19 0.08 -3.33 16 12 N -0.73 0.26 5.07 -55.11 -0.28 -0.02 16 13 C 0.15 -0.01 2.45 -67.93 -0.17 -0.18 16 14 H 0.09 0.18 7.58 -51.93 -0.39 -0.22 16 15 C -0.12 0.27 5.39 -26.73 -0.14 0.13 16 16 C -0.11 0.22 5.20 -26.73 -0.14 0.08 16 17 C -0.09 0.06 2.43 -90.62 -0.22 -0.16 16 18 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 19 C 0.08 -0.06 6.43 37.16 0.24 0.18 16 20 O -0.57 -0.36 13.19 -35.23 -0.46 -0.82 16 21 C -0.11 -0.06 5.10 -26.70 -0.14 -0.19 16 22 C -0.13 -0.08 5.50 -26.71 -0.15 -0.23 16 23 N -0.53 0.75 5.99 -5.70 -0.03 0.72 16 24 H 0.09 -0.47 7.14 -51.93 -0.37 -0.84 16 25 H 0.10 -0.61 5.19 -51.92 -0.27 -0.88 16 26 H 0.09 -0.58 8.14 -51.93 -0.42 -1.00 16 27 H 0.11 0.02 7.96 -51.93 -0.41 -0.39 16 28 H 0.37 -0.05 8.48 45.56 0.39 0.34 16 29 H -0.26 -0.47 7.11 56.52 0.40 -0.06 16 30 H -0.25 -0.70 7.11 56.52 0.40 -0.30 16 31 H 0.07 0.28 8.14 -51.93 -0.42 -0.14 16 32 H 0.08 0.24 5.47 -51.93 -0.28 -0.04 16 33 H 0.07 0.38 6.49 -51.93 -0.34 0.05 16 34 H 0.39 -1.28 7.73 -40.82 -0.32 -1.60 16 35 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 36 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 37 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 38 H 0.07 -0.19 8.14 -51.93 -0.42 -0.62 16 39 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 40 H 0.05 -0.08 8.14 -51.93 -0.42 -0.50 16 41 H 0.38 -1.29 9.12 45.56 0.42 -0.88 16 42 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 43 H 0.07 0.14 7.82 -51.93 -0.41 -0.27 16 44 H 0.06 0.02 8.14 -51.93 -0.42 -0.41 16 45 H 0.07 0.20 8.14 -51.92 -0.42 -0.22 16 46 H 0.42 -1.98 8.19 -40.82 -0.33 -2.32 16 LS Contribution 355.22 15.07 5.35 5.35 Total: 0.00 -9.52 355.22 -9.26 -18.79 By element: Atomic # 1 Polarization: -6.74 SS G_CDS: -6.59 Total: -13.34 kcal Atomic # 6 Polarization: 1.58 SS G_CDS: -2.41 Total: -0.83 kcal Atomic # 7 Polarization: 1.02 SS G_CDS: -0.31 Total: 0.70 kcal Atomic # 8 Polarization: -4.91 SS G_CDS: -0.75 Total: -5.66 kcal Atomic # 14 Polarization: -0.47 SS G_CDS: -4.55 Total: -5.02 kcal Total LS contribution 5.35 Total: 5.35 kcal Total: -9.52 -9.26 -18.79 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207542_12297754.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -74.680 kcal (2) G-P(sol) polarization free energy of solvation -9.523 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -84.203 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.264 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.787 kcal (6) G-S(sol) free energy of system = (1) + (5) -93.467 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds