Wall clock time and date at job start Tue Mar 9 2021 12:53:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.35452 * 125.56691 * 2 1 4 4 C 1.50704 * 126.06423 * 0.29107 * 3 2 1 5 5 O 1.42903 * 109.46830 * 150.02136 * 4 3 2 6 6 Si 1.86296 * 109.47460 * 30.02033 * 4 3 2 7 7 C 1.39834 * 107.86685 * 180.26072 * 3 2 1 8 8 C 1.50702 * 126.45667 * 180.02562 * 7 3 2 9 9 C 1.37871 * 107.08165 * 0.02562 * 7 3 2 10 10 C 1.46678 * 126.22768 * 179.97438 * 9 7 3 11 11 O 1.21697 * 120.00518 * 359.97438 * 10 9 7 12 12 N 1.34781 * 119.99776 * 179.97438 * 10 9 7 13 13 C 1.46498 * 119.99908 * 179.97438 * 12 10 9 14 14 H 1.09004 * 109.47089 * 35.00082 * 13 12 10 15 15 C 1.52999 * 109.47060 * 155.00107 * 13 12 10 16 16 C 1.52997 * 109.47407 * 180.02562 * 15 13 12 17 17 C 1.53006 * 109.47027 * 300.00097 * 16 15 13 18 18 H 1.09004 * 109.47066 * 299.99680 * 17 16 15 19 19 C 1.53000 * 109.47054 * 179.97438 * 17 16 15 20 20 O 1.42903 * 109.47130 * 174.99733 * 19 17 16 21 21 C 1.52999 * 109.47106 * 59.99719 * 17 16 15 22 22 C 1.52995 * 109.47241 * 274.99766 * 13 12 10 23 23 N 1.35535 * 125.56263 * 180.31220 * 2 1 3 24 24 H 1.08996 * 109.47084 * 269.71914 * 1 2 3 25 25 H 1.09010 * 109.46930 * 29.71527 * 1 2 3 26 26 H 1.08998 * 109.47407 * 149.71274 * 1 2 3 27 27 H 1.09001 * 109.46920 * 270.01491 * 4 3 2 28 28 H 0.96700 * 114.00316 * 299.99197 * 5 4 3 29 29 H 1.48498 * 110.00058 * 58.68038 * 6 4 3 30 30 H 1.48500 * 109.99885 * 180.02562 * 6 4 3 31 31 H 1.09005 * 109.46742 * 269.95591 * 8 7 3 32 32 H 1.08995 * 109.46831 * 29.95373 * 8 7 3 33 33 H 1.08996 * 109.46956 * 149.95526 * 8 7 3 34 34 H 0.96998 * 119.99678 * 359.97438 * 12 10 9 35 35 H 1.08999 * 109.46964 * 300.00038 * 15 13 12 36 36 H 1.08999 * 109.47513 * 59.99712 * 15 13 12 37 37 H 1.08999 * 109.47555 * 59.99500 * 16 15 13 38 38 H 1.09000 * 109.47719 * 179.97438 * 16 15 13 39 39 H 1.08996 * 109.47252 * 295.00018 * 19 17 16 40 40 H 1.09005 * 109.47220 * 55.00128 * 19 17 16 41 41 H 0.96696 * 114.00543 * 180.02562 * 20 19 17 42 42 H 1.09004 * 109.47190 * 60.00037 * 21 17 16 43 43 H 1.08999 * 109.46964 * 180.02562 * 21 17 16 44 44 H 1.08995 * 109.47591 * 300.00296 * 22 13 12 45 45 H 1.09007 * 109.46749 * 60.00225 * 22 13 12 46 46 H 0.97004 * 125.67543 * 359.69416 * 23 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2949 1.1018 0.0000 4 6 1.8200 2.5321 0.0062 5 8 2.7803 3.3499 0.6779 6 14 0.1846 2.6397 0.8920 7 6 3.6270 0.6767 -0.0061 8 6 4.8486 1.5592 -0.0077 9 6 3.6121 -0.7019 -0.0102 10 6 4.7859 -1.5815 -0.0177 11 8 5.9049 -1.1031 -0.0211 12 7 4.6252 -2.9197 -0.0206 13 6 5.7975 -3.7982 -0.0286 14 1 6.5959 -3.3441 0.5584 15 6 5.4245 -5.1519 0.5790 16 6 6.6489 -6.0693 0.5713 17 6 7.1263 -6.2706 -0.8684 18 1 6.3282 -6.7249 -1.4556 19 6 8.3511 -7.1874 -0.8760 20 8 8.7265 -7.4695 -2.2257 21 6 7.4993 -4.9169 -1.4760 22 6 6.2742 -3.9995 -1.4684 23 7 2.2953 -1.1025 -0.0060 24 1 -0.3633 -0.0050 1.0276 25 1 -0.3633 0.8926 -0.5095 26 1 -0.3634 -0.8874 -0.5183 27 1 1.7010 2.8798 -1.0200 28 1 2.9370 3.0974 1.5981 29 1 0.3263 2.1385 2.2827 30 1 -0.2948 4.0451 0.9044 31 1 5.1399 1.7744 -1.0358 32 1 4.6236 2.4920 0.5091 33 1 5.6658 1.0492 0.5023 34 1 3.7333 -3.3010 -0.0175 35 1 5.0848 -5.0085 1.6048 36 1 4.6261 -5.6061 -0.0078 37 1 7.4470 -5.6150 1.1585 38 1 6.3833 -7.0335 1.0046 39 1 9.1775 -6.6940 -0.3645 40 1 8.1109 -8.1190 -0.3635 41 1 9.4977 -8.0473 -2.3069 42 1 8.2974 -4.4625 -0.8887 43 1 7.8389 -5.0603 -2.5017 44 1 5.4759 -4.4536 -2.0553 45 1 6.5399 -3.0350 -1.9013 46 1 1.9833 -2.0210 -0.0068 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7207542_12297754.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:37 Heat of formation + Delta-G solvation = -97.904306 kcal Electronic energy + Delta-G solvation = -26275.814510 eV Core-core repulsion = 22552.419430 eV Total energy + Delta-G solvation = -3723.395080 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 309.177 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -42.68650 -40.89456 -39.44544 -37.92091 -37.46689 -35.38683 -33.66236 -33.17845 -31.83968 -31.33740 -29.30850 -27.64475 -26.56954 -25.61859 -23.85888 -22.77103 -21.94713 -21.12999 -20.68269 -20.33676 -19.30264 -18.20483 -17.75130 -17.22447 -16.72919 -16.68901 -16.20654 -15.97050 -15.86426 -15.58453 -15.26495 -14.87796 -14.79343 -14.59885 -14.35542 -14.03063 -14.02014 -13.88627 -13.71554 -13.54670 -13.28059 -13.21514 -13.11577 -12.99075 -12.56893 -12.33493 -12.29759 -12.16869 -11.82497 -11.64312 -11.48638 -11.35233 -11.09710 -10.84842 -10.52689 -10.22703 -9.55386 -8.97494 -4.76758 0.34882 1.23037 1.67021 1.70484 1.93055 2.06933 2.13392 2.25494 3.28370 3.41664 3.56868 3.72159 3.79350 3.83847 3.94717 3.97441 3.97882 4.21523 4.25807 4.31497 4.37769 4.45141 4.48871 4.51382 4.57595 4.66269 4.66610 4.68822 4.79308 4.79654 4.81621 4.87922 4.92012 5.02327 5.04310 5.10609 5.12174 5.17280 5.21916 5.31905 5.33390 5.38745 5.45661 5.69832 5.82594 6.38356 6.51212 6.59465 6.87404 7.09123 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.110 4.110 2 C 0.087 3.913 3 C -0.233 4.233 4 C -0.053 4.053 5 O -0.549 6.549 6 Si 0.762 3.238 7 C -0.071 4.071 8 C -0.093 4.093 9 C -0.083 4.083 10 C 0.587 3.413 11 O -0.568 6.568 12 N -0.714 5.714 13 C 0.149 3.851 14 H 0.067 0.933 15 C -0.116 4.116 16 C -0.107 4.107 17 C -0.086 4.086 18 H 0.076 0.924 19 C 0.075 3.925 20 O -0.596 6.596 21 C -0.104 4.104 22 C -0.123 4.123 23 N -0.517 5.517 24 H 0.103 0.897 25 H 0.117 0.883 26 H 0.117 0.883 27 H 0.113 0.887 28 H 0.381 0.619 29 H -0.291 1.291 30 H -0.305 1.305 31 H 0.052 0.948 32 H 0.085 0.915 33 H 0.055 0.945 34 H 0.409 0.591 35 H 0.082 0.918 36 H 0.086 0.914 37 H 0.066 0.934 38 H 0.088 0.912 39 H 0.048 0.952 40 H 0.060 0.940 41 H 0.395 0.605 42 H 0.055 0.945 43 H 0.058 0.942 44 H 0.072 0.928 45 H 0.041 0.959 46 H 0.434 0.566 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.524 -8.000 1.270 11.055 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.165 4.165 2 C -0.033 4.033 3 C -0.239 4.239 4 C -0.161 4.161 5 O -0.357 6.357 6 Si 0.667 3.333 7 C -0.080 4.080 8 C -0.150 4.150 9 C -0.195 4.195 10 C 0.376 3.624 11 O -0.448 6.448 12 N -0.365 5.365 13 C 0.045 3.955 14 H 0.085 0.915 15 C -0.154 4.154 16 C -0.145 4.145 17 C -0.105 4.105 18 H 0.094 0.906 19 C -0.002 4.002 20 O -0.405 6.405 21 C -0.142 4.142 22 C -0.161 4.161 23 N -0.115 5.115 24 H 0.121 0.879 25 H 0.135 0.865 26 H 0.136 0.864 27 H 0.130 0.870 28 H 0.230 0.770 29 H -0.217 1.217 30 H -0.234 1.234 31 H 0.070 0.930 32 H 0.103 0.897 33 H 0.074 0.926 34 H 0.246 0.754 35 H 0.100 0.900 36 H 0.104 0.896 37 H 0.084 0.916 38 H 0.107 0.893 39 H 0.067 0.933 40 H 0.078 0.922 41 H 0.245 0.755 42 H 0.074 0.926 43 H 0.077 0.923 44 H 0.091 0.909 45 H 0.059 0.941 46 H 0.275 0.725 Dipole moment (debyes) X Y Z Total from point charges -7.633 -6.890 1.238 10.357 hybrid contribution 1.705 -0.384 0.658 1.868 sum -5.928 -7.274 1.896 9.573 Atomic orbital electron populations 1.20716 0.84354 1.05715 1.05738 1.20717 0.95112 0.84789 1.02723 1.19660 0.92471 0.95818 1.15995 1.24667 1.02006 0.86573 1.02878 1.86512 1.61727 1.57677 1.29736 0.94432 0.79073 0.79876 0.79887 1.19926 0.95411 0.91452 1.01199 1.20411 0.94127 0.98889 1.01545 1.19921 0.83854 0.93685 1.22001 1.17247 0.87237 0.82219 0.75693 1.90817 1.25925 1.75869 1.52156 1.45809 1.10649 1.04744 1.75275 1.20999 0.87594 0.90583 0.96357 0.91510 1.21742 0.99100 0.92550 1.01991 1.21454 0.97492 1.00564 0.94979 1.21183 0.97315 0.94654 0.97332 0.90571 1.22312 0.96604 0.98354 0.82967 1.86430 1.53507 1.72927 1.27620 1.21430 0.96926 0.94760 1.01122 1.21854 0.98600 0.99040 0.96638 1.41684 1.03924 1.09318 1.56588 0.87925 0.86499 0.86421 0.86961 0.77026 1.21736 1.23365 0.92973 0.89695 0.92591 0.75449 0.89976 0.89572 0.91554 0.89345 0.93323 0.92155 0.75513 0.92613 0.92327 0.90910 0.94061 0.72519 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 1.44 8.22 71.24 0.59 2.02 16 2 C 0.09 -0.34 6.83 41.34 0.28 -0.06 16 3 C -0.23 -0.62 5.38 -20.12 -0.11 -0.73 16 4 C -0.05 -0.10 3.03 71.24 0.22 0.12 16 5 O -0.55 -3.24 10.19 -148.98 -1.52 -4.76 16 6 Si 0.76 -1.66 26.78 68.60 1.84 0.18 16 7 C -0.07 -0.58 6.15 -19.56 -0.12 -0.70 16 8 C -0.09 -1.02 9.51 71.24 0.68 -0.34 16 9 C -0.08 -0.41 7.06 40.35 0.28 -0.13 16 10 C 0.59 4.53 7.75 86.45 0.67 5.20 16 11 O -0.57 -9.41 14.47 -4.34 -0.06 -9.47 16 12 N -0.71 0.26 5.07 -446.50 -2.27 -2.00 16 13 C 0.15 0.09 2.45 44.99 0.11 0.20 16 14 H 0.07 0.41 7.58 -2.38 -0.02 0.39 16 15 C -0.12 0.64 5.39 30.59 0.16 0.81 16 16 C -0.11 0.52 5.20 30.60 0.16 0.68 16 17 C -0.09 0.12 2.43 -10.79 -0.03 0.09 16 18 H 0.08 -0.04 8.14 -2.38 -0.02 -0.06 16 19 C 0.08 -0.13 6.43 71.98 0.46 0.34 16 20 O -0.60 -0.90 13.19 -148.98 -1.97 -2.87 16 21 C -0.10 -0.27 5.10 30.61 0.16 -0.12 16 22 C -0.12 -0.35 5.50 30.61 0.17 -0.18 16 23 N -0.52 2.14 5.99 -171.93 -1.03 1.11 16 24 H 0.10 -1.50 7.14 -2.39 -0.02 -1.52 16 25 H 0.12 -1.81 5.19 -2.38 -0.01 -1.82 16 26 H 0.12 -2.12 8.14 -2.39 -0.02 -2.14 16 27 H 0.11 0.10 7.96 -2.39 -0.02 0.08 16 28 H 0.38 0.57 8.48 -74.06 -0.63 -0.06 16 29 H -0.29 -0.79 7.11 99.48 0.71 -0.08 16 30 H -0.30 -1.86 7.11 99.48 0.71 -1.15 16 31 H 0.05 0.65 8.14 -2.38 -0.02 0.63 16 32 H 0.08 0.78 5.47 -2.39 -0.01 0.77 16 33 H 0.06 0.81 6.49 -2.39 -0.02 0.79 16 34 H 0.41 -3.19 7.73 -92.71 -0.72 -3.90 16 35 H 0.08 -0.56 8.14 -2.39 -0.02 -0.58 16 36 H 0.09 -0.71 8.14 -2.39 -0.02 -0.73 16 37 H 0.07 -0.25 8.14 -2.39 -0.02 -0.27 16 38 H 0.09 -0.67 8.14 -2.39 -0.02 -0.69 16 39 H 0.05 -0.11 8.14 -2.39 -0.02 -0.13 16 40 H 0.06 -0.28 8.14 -2.38 -0.02 -0.30 16 41 H 0.40 -2.62 9.12 -74.06 -0.68 -3.29 16 42 H 0.06 0.22 8.14 -2.38 -0.02 0.21 16 43 H 0.06 0.34 7.82 -2.39 -0.02 0.32 16 44 H 0.07 0.06 8.14 -2.39 -0.02 0.04 16 45 H 0.04 0.36 8.14 -2.38 -0.02 0.34 16 46 H 0.43 -5.22 8.19 -92.71 -0.76 -5.98 16 Total: 0.00 -26.71 355.22 -3.03 -29.75 By element: Atomic # 1 Polarization: -17.43 SS G_CDS: -1.71 Total: -19.14 kcal Atomic # 6 Polarization: 3.52 SS G_CDS: 3.68 Total: 7.21 kcal Atomic # 7 Polarization: 2.41 SS G_CDS: -3.30 Total: -0.89 kcal Atomic # 8 Polarization: -13.55 SS G_CDS: -3.55 Total: -17.10 kcal Atomic # 14 Polarization: -1.66 SS G_CDS: 1.84 Total: 0.18 kcal Total: -26.71 -3.03 -29.75 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207542_12297754.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -68.159 kcal (2) G-P(sol) polarization free energy of solvation -26.710 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -94.869 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.035 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.745 kcal (6) G-S(sol) free energy of system = (1) + (5) -97.904 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds