Wall clock time and date at job start Tue Mar 9 2021 12:53:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86300 * 109.47146 * 2 1 4 4 C 1.50695 * 109.46955 * 239.99761 * 2 1 3 5 5 C 1.38416 * 119.89054 * 120.00285 * 4 2 1 6 6 C 1.38247 * 120.33926 * 179.97438 * 5 4 2 7 7 C 1.38283 * 120.11772 * 359.97438 * 6 5 4 8 8 F 1.35100 * 120.10965 * 179.97438 * 7 6 5 9 9 C 1.39865 * 119.77970 * 359.97438 * 7 6 5 10 10 C 1.47690 * 120.16707 * 180.02562 * 9 7 6 11 11 O 1.21569 * 119.99615 * 359.97438 * 10 9 7 12 12 N 1.34769 * 120.00215 * 180.02562 * 10 9 7 13 13 C 1.46496 * 120.00327 * 180.02562 * 12 10 9 14 14 H 1.09003 * 109.47354 * 34.99565 * 13 12 10 15 15 C 1.52998 * 109.47586 * 154.99418 * 13 12 10 16 16 C 1.53005 * 109.47198 * 179.97438 * 15 13 12 17 17 C 1.52996 * 109.47071 * 300.00384 * 16 15 13 18 18 H 1.09001 * 109.47290 * 299.99658 * 17 16 15 19 19 C 1.53004 * 109.46731 * 180.02562 * 17 16 15 20 20 O 1.42904 * 109.46845 * 174.99689 * 19 17 16 21 21 C 1.52993 * 109.47610 * 60.00036 * 17 16 15 22 22 C 1.52999 * 109.46976 * 274.99690 * 13 12 10 23 23 C 1.37901 * 119.89321 * 299.72303 * 4 2 1 24 24 H 0.96700 * 113.99995 * 60.00040 * 1 2 3 25 25 H 1.09001 * 109.46621 * 119.99651 * 2 1 3 26 26 H 1.48501 * 109.99832 * 298.67587 * 3 2 1 27 27 H 1.48498 * 109.99998 * 59.99906 * 3 2 1 28 28 H 1.07998 * 119.83159 * 0.02562 * 5 4 2 29 29 H 1.08002 * 119.94285 * 179.97438 * 6 5 4 30 30 H 0.97002 * 120.00244 * 359.97438 * 12 10 9 31 31 H 1.08992 * 109.47368 * 300.00104 * 15 13 12 32 32 H 1.09001 * 109.46966 * 60.00157 * 15 13 12 33 33 H 1.09001 * 109.46784 * 60.00352 * 16 15 13 34 34 H 1.08997 * 109.47044 * 180.02562 * 16 15 13 35 35 H 1.09000 * 109.47016 * 294.99744 * 19 17 16 36 36 H 1.09000 * 109.47126 * 54.99966 * 19 17 16 37 37 H 0.96700 * 113.99611 * 179.97438 * 20 19 17 38 38 H 1.09001 * 109.47103 * 59.99507 * 21 17 16 39 39 H 1.08992 * 109.47554 * 179.97438 * 21 17 16 40 40 H 1.09001 * 109.47179 * 299.99600 * 22 13 12 41 41 H 1.09004 * 109.47489 * 59.99720 * 22 13 12 42 42 H 1.08003 * 120.05851 * 0.02619 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 2.7269 -0.0356 -2.1400 6 6 3.1932 -0.6785 -3.2716 7 6 2.8672 -2.0025 -3.5015 8 9 3.3225 -2.6305 -4.6077 9 6 2.0644 -2.6895 -2.5851 10 6 1.7113 -4.1039 -2.8218 11 8 2.1183 -4.6738 -3.8155 12 7 0.9371 -4.7624 -1.9368 13 6 0.5874 -6.1656 -2.1714 14 1 1.4243 -6.6735 -2.6507 15 6 0.2766 -6.8439 -0.8357 16 6 -0.0893 -8.3093 -1.0808 17 6 -1.3187 -8.3829 -1.9885 18 1 -2.1554 -7.8749 -1.5090 19 6 -1.6849 -9.8483 -2.2331 20 8 -2.8990 -9.9169 -2.9835 21 6 -1.0079 -7.7047 -3.3242 22 6 -0.6418 -6.2399 -3.0793 23 6 1.6015 -2.0324 -1.4435 24 1 -0.3933 0.4417 -0.7650 25 1 1.7922 -0.5138 0.8900 26 1 1.5880 2.4585 -1.2243 27 1 1.5615 2.4679 1.2085 28 1 2.9855 0.9981 -1.9645 29 1 3.8133 -0.1457 -3.9774 30 1 0.6120 -4.3076 -1.1441 31 1 1.1522 -6.7911 -0.1889 32 1 -0.5604 -6.3361 -0.3564 33 1 0.7474 -8.8173 -1.5603 34 1 -0.3111 -8.7924 -0.1293 35 1 -0.8847 -10.3344 -2.7912 36 1 -1.8198 -10.3535 -1.2767 37 1 -3.1919 -10.8181 -3.1762 38 1 -0.1712 -8.2127 -3.8037 39 1 -1.8835 -7.7576 -3.9711 40 1 -1.4788 -5.7321 -2.6000 41 1 -0.4204 -5.7566 -4.0310 42 1 0.9839 -2.5576 -0.7300 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7207542_12335834.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:45 Heat of formation + Delta-G solvation = -147.669920 kcal Electronic energy + Delta-G solvation = -25833.455211 eV Core-core repulsion = 21886.723164 eV Total energy + Delta-G solvation = -3946.732047 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.141 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -50.03057 -41.54758 -40.35729 -39.43847 -37.63227 -37.42546 -35.39474 -33.03839 -32.32835 -31.83473 -30.99024 -26.67424 -26.55659 -25.13427 -23.84258 -23.23154 -22.06094 -21.62499 -20.85749 -19.31499 -18.39171 -18.38024 -18.14076 -17.58637 -16.99282 -16.90591 -16.41796 -16.17586 -16.08860 -15.81929 -15.75205 -15.62129 -15.08568 -14.83661 -14.66047 -14.49326 -14.39677 -13.99646 -13.62896 -13.55036 -13.24575 -13.17573 -13.00059 -12.85815 -12.30984 -12.29648 -12.16027 -11.74944 -11.63865 -11.48201 -11.36780 -11.11540 -10.84594 -10.64342 -10.42073 -10.13128 -9.84093 -4.88173 -0.51146 -0.04380 1.31069 1.59297 1.63623 1.92236 2.02006 2.46138 3.03578 3.27728 3.32589 3.44604 3.51468 3.56659 3.63247 3.73920 3.90630 3.97507 4.00763 4.10097 4.26160 4.30713 4.37972 4.45617 4.47304 4.49038 4.57479 4.60985 4.69092 4.77298 4.80353 4.82399 4.92151 4.93969 5.03249 5.04653 5.11097 5.12550 5.17489 5.32643 5.36889 5.45744 5.58632 6.34810 6.49448 6.87948 7.03439 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.075 4.075 3 Si 0.762 3.238 4 C -0.131 4.131 5 C -0.051 4.051 6 C -0.152 4.152 7 C 0.132 3.868 8 F -0.137 7.137 9 C -0.189 4.189 10 C 0.553 3.447 11 O -0.572 6.572 12 N -0.706 5.706 13 C 0.147 3.853 14 H 0.068 0.932 15 C -0.117 4.117 16 C -0.106 4.106 17 C -0.087 4.087 18 H 0.075 0.925 19 C 0.075 3.925 20 O -0.597 6.597 21 C -0.104 4.104 22 C -0.124 4.124 23 C -0.024 4.024 24 H 0.388 0.612 25 H 0.138 0.862 26 H -0.279 1.279 27 H -0.305 1.305 28 H 0.168 0.832 29 H 0.167 0.833 30 H 0.414 0.586 31 H 0.084 0.916 32 H 0.085 0.915 33 H 0.067 0.933 34 H 0.089 0.911 35 H 0.049 0.951 36 H 0.061 0.939 37 H 0.395 0.605 38 H 0.056 0.944 39 H 0.058 0.942 40 H 0.072 0.928 41 H 0.040 0.960 42 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.861 1.639 6.498 6.757 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.184 4.184 3 Si 0.667 3.333 4 C -0.132 4.132 5 C -0.068 4.068 6 C -0.171 4.171 7 C 0.112 3.888 8 F -0.116 7.116 9 C -0.193 4.193 10 C 0.341 3.659 11 O -0.452 6.452 12 N -0.358 5.358 13 C 0.042 3.958 14 H 0.086 0.914 15 C -0.155 4.155 16 C -0.144 4.144 17 C -0.106 4.106 18 H 0.094 0.906 19 C -0.002 4.002 20 O -0.405 6.405 21 C -0.142 4.142 22 C -0.162 4.162 23 C -0.043 4.043 24 H 0.237 0.763 25 H 0.156 0.844 26 H -0.205 1.205 27 H -0.234 1.234 28 H 0.185 0.815 29 H 0.185 0.815 30 H 0.253 0.747 31 H 0.103 0.897 32 H 0.103 0.897 33 H 0.086 0.914 34 H 0.107 0.893 35 H 0.067 0.933 36 H 0.079 0.921 37 H 0.245 0.755 38 H 0.074 0.926 39 H 0.077 0.923 40 H 0.091 0.909 41 H 0.059 0.941 42 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges 1.087 2.340 6.348 6.852 hybrid contribution -1.189 -0.807 -0.964 1.730 sum -0.102 1.533 5.384 5.599 Atomic orbital electron populations 1.86594 1.18084 1.80252 1.50340 1.25182 0.83658 1.11469 0.98121 0.94154 0.90270 0.72112 0.76720 1.20412 1.00068 0.94438 0.98254 1.21385 0.93426 1.00766 0.91254 1.21389 1.03283 0.91709 1.00682 1.18233 0.95287 0.91930 0.83372 1.91557 1.86597 1.82805 1.50624 1.20069 1.05632 0.94528 0.99051 1.18369 0.78295 0.86418 0.82834 1.90837 1.55286 1.69521 1.29560 1.45865 1.51213 1.13064 1.25621 1.21042 0.96794 0.80516 0.97412 0.91416 1.21755 1.03212 0.95831 0.94686 1.21454 0.96763 0.95994 1.00225 1.21189 0.98609 0.94905 0.95868 0.90646 1.22310 0.86062 0.96609 0.95218 1.86433 1.42537 1.34797 1.76729 1.21406 1.00900 0.94319 0.97557 1.21847 0.97867 0.97405 0.99118 1.21194 0.95332 0.94039 0.93732 0.76258 0.84433 1.20538 1.23375 0.81504 0.81537 0.74746 0.89723 0.89676 0.91431 0.89286 0.93253 0.92126 0.75514 0.92560 0.92299 0.90902 0.94111 0.82414 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 2.13 12.77 -148.98 -1.90 0.23 16 2 C -0.08 0.54 2.81 71.23 0.20 0.74 16 3 Si 0.76 -5.51 29.78 68.60 2.04 -3.47 16 4 C -0.13 0.74 5.38 -19.90 -0.11 0.63 16 5 C -0.05 0.32 8.66 22.31 0.19 0.51 16 6 C -0.15 0.29 10.01 22.28 0.22 0.52 16 7 C 0.13 0.75 7.29 22.67 0.17 0.92 16 8 F -0.14 -1.79 15.55 44.97 0.70 -1.09 16 9 C -0.19 -0.74 5.88 -20.05 -0.12 -0.85 16 10 C 0.55 4.66 7.73 86.74 0.67 5.33 16 11 O -0.57 -10.35 15.00 -3.93 -0.06 -10.41 16 12 N -0.71 -0.77 5.03 -445.58 -2.24 -3.01 16 13 C 0.15 0.27 2.45 44.99 0.11 0.38 16 14 H 0.07 0.47 7.58 -2.39 -0.02 0.46 16 15 C -0.12 0.51 5.39 30.60 0.16 0.68 16 16 C -0.11 0.44 5.20 30.59 0.16 0.59 16 17 C -0.09 0.05 2.43 -10.80 -0.03 0.02 16 18 H 0.08 0.04 8.14 -2.39 -0.02 0.02 16 19 C 0.08 -0.09 6.43 71.98 0.46 0.38 16 20 O -0.60 -1.22 13.20 -148.98 -1.97 -3.19 16 21 C -0.10 -0.35 5.10 30.58 0.16 -0.20 16 22 C -0.12 -0.49 5.49 30.58 0.17 -0.32 16 23 C -0.02 0.08 9.10 22.52 0.20 0.28 16 24 H 0.39 -3.40 8.70 -74.06 -0.64 -4.04 16 25 H 0.14 -1.34 7.96 -2.39 -0.02 -1.36 16 26 H -0.28 0.97 7.11 99.48 0.71 1.68 16 27 H -0.31 -0.52 7.11 99.48 0.71 0.19 16 28 H 0.17 -1.95 4.86 -2.91 -0.01 -1.96 16 29 H 0.17 -1.00 8.06 -2.91 -0.02 -1.03 16 30 H 0.41 -2.29 6.64 -92.71 -0.62 -2.90 16 31 H 0.08 -0.50 8.14 -2.39 -0.02 -0.52 16 32 H 0.08 -0.57 8.14 -2.39 -0.02 -0.58 16 33 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 34 H 0.09 -0.61 8.14 -2.39 -0.02 -0.63 16 35 H 0.05 -0.09 8.14 -2.39 -0.02 -0.11 16 36 H 0.06 -0.25 8.14 -2.39 -0.02 -0.27 16 37 H 0.40 -2.44 9.12 -74.06 -0.68 -3.12 16 38 H 0.06 0.26 8.14 -2.39 -0.02 0.24 16 39 H 0.06 0.38 7.82 -2.39 -0.02 0.36 16 40 H 0.07 0.15 8.14 -2.39 -0.02 0.13 16 41 H 0.04 0.39 8.14 -2.38 -0.02 0.37 16 42 H 0.16 -1.23 6.40 -2.91 -0.02 -1.25 16 Total: 0.00 -24.26 343.45 -1.62 -25.89 By element: Atomic # 1 Polarization: -13.74 SS G_CDS: -0.83 Total: -14.57 kcal Atomic # 6 Polarization: 6.99 SS G_CDS: 2.63 Total: 9.62 kcal Atomic # 7 Polarization: -0.77 SS G_CDS: -2.24 Total: -3.01 kcal Atomic # 8 Polarization: -9.44 SS G_CDS: -3.93 Total: -13.37 kcal Atomic # 9 Polarization: -1.79 SS G_CDS: 0.70 Total: -1.09 kcal Atomic # 14 Polarization: -5.51 SS G_CDS: 2.04 Total: -3.47 kcal Total: -24.26 -1.62 -25.89 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207542_12335834.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -121.784 kcal (2) G-P(sol) polarization free energy of solvation -24.261 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -146.046 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.624 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.885 kcal (6) G-S(sol) free energy of system = (1) + (5) -147.670 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds