Wall clock time and date at job start Tue Mar 9 2021 12:53:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86302 * 109.47252 * 2 1 4 4 C 1.50701 * 109.46981 * 119.99878 * 2 1 3 5 5 C 1.34460 * 126.48215 * 255.02274 * 4 2 1 6 6 N 1.36560 * 109.98430 * 179.97438 * 5 4 2 7 7 C 1.37835 * 109.86143 * 0.02562 * 6 5 4 8 8 C 1.38644 * 133.38128 * 179.97438 * 7 6 5 9 9 C 1.39318 * 119.66344 * 180.02562 * 8 7 6 10 10 C 1.47584 * 119.82700 * 180.02562 * 9 8 7 11 11 O 1.21586 * 120.00460 * 0.02562 * 10 9 8 12 12 N 1.34785 * 119.99614 * 180.02562 * 10 9 8 13 13 C 1.46495 * 119.99668 * 180.02562 * 12 10 9 14 14 H 1.09000 * 109.47536 * 35.00373 * 13 12 10 15 15 C 1.52998 * 109.46941 * 155.00137 * 13 12 10 16 16 C 1.53001 * 109.47141 * 179.97438 * 15 13 12 17 17 C 1.52995 * 109.47456 * 300.00111 * 16 15 13 18 18 H 1.09005 * 109.47359 * 300.00509 * 17 16 15 19 19 C 1.53001 * 109.47456 * 179.97438 * 17 16 15 20 20 O 1.42904 * 109.47168 * 175.00080 * 19 17 16 21 21 C 1.52998 * 109.47036 * 59.99825 * 17 16 15 22 22 C 1.52995 * 109.47473 * 275.00136 * 13 12 10 23 23 C 1.40193 * 120.34016 * 0.02562 * 9 8 7 24 24 C 1.36235 * 120.37705 * 359.97438 * 23 9 8 25 25 C 1.39872 * 119.95826 * 359.97438 * 24 23 9 26 26 H 0.96694 * 113.99839 * 300.00451 * 1 2 3 27 27 H 1.08994 * 109.47217 * 240.00041 * 2 1 3 28 28 H 1.48501 * 110.00205 * 178.67922 * 3 2 1 29 29 H 1.48503 * 109.99901 * 300.00008 * 3 2 1 30 30 H 1.07999 * 125.00823 * 359.96118 * 5 4 2 31 31 H 0.97003 * 125.06819 * 180.26859 * 6 5 4 32 32 H 1.08001 * 120.16835 * 0.02562 * 8 7 6 33 33 H 0.97001 * 119.99948 * 0.02562 * 12 10 9 34 34 H 1.09000 * 109.47260 * 300.00347 * 15 13 12 35 35 H 1.09003 * 109.47222 * 60.00093 * 15 13 12 36 36 H 1.09000 * 109.47353 * 60.00226 * 16 15 13 37 37 H 1.09002 * 109.47055 * 180.02562 * 16 15 13 38 38 H 1.08997 * 109.47085 * 295.00137 * 19 17 16 39 39 H 1.08998 * 109.46562 * 54.99917 * 19 17 16 40 40 H 0.96689 * 114.00034 * 179.97438 * 20 19 17 41 41 H 1.09003 * 109.47222 * 60.00173 * 21 17 16 42 42 H 1.08997 * 109.47116 * 180.02562 * 21 17 16 43 43 H 1.09005 * 109.47359 * 300.00744 * 22 13 12 44 44 H 1.09002 * 109.47026 * 60.00171 * 22 13 12 45 45 H 1.08006 * 119.81294 * 179.97438 * 23 9 8 46 46 H 1.08004 * 120.02005 * 179.97438 * 24 23 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.4612 -0.1362 2.3248 6 7 2.8026 -1.0945 3.2358 7 6 2.4945 -2.3431 2.7398 8 6 2.6312 -3.6279 3.2426 9 6 2.2145 -4.7155 2.4782 10 6 2.3579 -6.0846 3.0101 11 8 2.8382 -6.2612 4.1131 12 7 1.9563 -7.1394 2.2733 13 6 2.0981 -8.4984 2.8015 14 1 1.9326 -8.4886 3.8788 15 6 1.0691 -9.4142 2.1358 16 6 1.2176 -10.8337 2.6870 17 6 2.6269 -11.3507 2.3918 18 1 2.7922 -11.3602 1.3144 19 6 2.7756 -12.7700 2.9436 20 8 4.0497 -13.2964 2.5672 21 6 3.6559 -10.4349 3.0575 22 6 3.5075 -9.0157 2.5068 23 6 1.6597 -4.5160 1.2062 24 6 1.5217 -3.2570 0.7045 25 6 1.9344 -2.1548 1.4604 26 1 -0.3933 0.4417 0.7650 27 1 1.7924 -0.5138 -0.8899 28 1 3.5347 1.7703 0.0322 29 1 1.5615 2.4679 -1.2085 30 1 2.5970 0.9263 2.4628 31 1 3.1993 -0.9221 4.1040 32 1 3.0586 -3.7848 4.2220 33 1 1.5735 -6.9985 1.3932 34 1 0.0650 -9.0456 2.3457 35 1 1.2346 -9.4241 1.0585 36 1 1.0523 -10.8243 3.7644 37 1 0.4847 -11.4863 2.2124 38 1 2.6987 -12.7471 4.0306 39 1 1.9865 -13.4024 2.5367 40 1 4.2131 -14.1952 2.8841 41 1 3.4907 -10.4254 4.1349 42 1 4.6600 -10.8030 2.8468 43 1 3.6731 -9.0255 1.4294 44 1 4.2406 -8.3633 2.9811 45 1 1.3399 -5.3654 0.6207 46 1 1.0939 -3.1100 -0.2762 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207542_12335838.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:52 Heat of formation + Delta-G solvation = -70.598603 kcal Electronic energy + Delta-G solvation = -27696.898308 eV Core-core repulsion = 23745.546489 eV Total energy + Delta-G solvation = -3951.351819 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.162 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -42.46300 -41.06449 -39.60363 -37.91117 -37.53422 -37.26774 -35.15347 -33.23433 -31.83254 -31.72261 -30.69294 -30.12613 -26.63025 -26.26983 -24.42150 -23.79251 -23.56484 -22.14830 -21.33054 -20.88773 -20.70555 -19.36056 -18.43316 -18.10627 -17.77861 -17.14766 -16.89281 -16.38385 -16.22440 -15.93546 -15.73353 -15.56952 -15.47408 -15.18565 -14.92914 -14.84665 -14.72347 -14.46012 -14.38431 -14.01464 -13.90906 -13.50682 -13.16111 -13.10540 -12.98530 -12.60229 -12.30061 -12.23879 -12.18699 -12.13538 -11.90657 -11.60192 -11.42601 -11.25808 -10.87748 -10.76761 -10.73128 -10.34800 -9.97955 -9.32985 -8.79323 -5.09999 -0.23021 0.42157 1.29116 1.38806 1.62506 1.90555 1.97403 2.06799 2.27615 2.97290 3.19961 3.55461 3.57488 3.63675 3.73641 3.77575 3.80820 3.88261 3.96682 3.99443 4.13693 4.25964 4.33407 4.35145 4.43696 4.44605 4.47458 4.51273 4.54003 4.57474 4.60561 4.63622 4.75631 4.80559 4.94025 5.00256 5.03541 5.09937 5.15468 5.26106 5.30660 5.40328 5.45299 5.47112 5.49138 5.60610 5.62904 6.00852 6.37746 6.56842 6.65612 6.69100 7.31011 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.030 4.030 3 Si 0.685 3.315 4 C -0.211 4.211 5 C 0.077 3.923 6 N -0.584 5.584 7 C 0.081 3.919 8 C -0.057 4.057 9 C -0.121 4.121 10 C 0.564 3.436 11 O -0.538 6.538 12 N -0.723 5.723 13 C 0.145 3.855 14 H 0.090 0.910 15 C -0.125 4.125 16 C -0.109 4.109 17 C -0.090 4.090 18 H 0.079 0.921 19 C 0.079 3.921 20 O -0.573 6.573 21 C -0.107 4.107 22 C -0.130 4.130 23 C -0.113 4.113 24 C -0.073 4.073 25 C -0.064 4.064 26 H 0.377 0.623 27 H 0.111 0.889 28 H -0.256 1.256 29 H -0.254 1.254 30 H 0.179 0.821 31 H 0.422 0.578 32 H 0.136 0.864 33 H 0.400 0.600 34 H 0.073 0.927 35 H 0.070 0.930 36 H 0.069 0.931 37 H 0.071 0.929 38 H 0.046 0.954 39 H 0.045 0.955 40 H 0.380 0.620 41 H 0.063 0.937 42 H 0.073 0.927 43 H 0.064 0.936 44 H 0.069 0.931 45 H 0.126 0.874 46 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.314 1.448 0.819 2.850 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.141 4.141 3 Si 0.586 3.414 4 C -0.219 4.219 5 C -0.052 4.052 6 N -0.186 5.186 7 C -0.025 4.025 8 C -0.078 4.078 9 C -0.125 4.125 10 C 0.352 3.648 11 O -0.416 6.416 12 N -0.374 5.374 13 C 0.041 3.959 14 H 0.108 0.892 15 C -0.163 4.163 16 C -0.148 4.148 17 C -0.108 4.108 18 H 0.097 0.903 19 C 0.001 3.999 20 O -0.379 6.379 21 C -0.145 4.145 22 C -0.168 4.168 23 C -0.133 4.133 24 C -0.092 4.092 25 C -0.069 4.069 26 H 0.224 0.776 27 H 0.128 0.872 28 H -0.181 1.181 29 H -0.179 1.179 30 H 0.195 0.805 31 H 0.260 0.740 32 H 0.154 0.846 33 H 0.236 0.764 34 H 0.091 0.909 35 H 0.089 0.911 36 H 0.087 0.913 37 H 0.090 0.910 38 H 0.064 0.936 39 H 0.064 0.936 40 H 0.227 0.773 41 H 0.081 0.919 42 H 0.092 0.908 43 H 0.083 0.917 44 H 0.087 0.913 45 H 0.143 0.857 46 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -1.291 2.231 0.466 2.619 hybrid contribution 0.048 -1.000 0.080 1.004 sum -1.243 1.231 0.545 1.832 Atomic orbital electron populations 1.86505 1.17428 1.81753 1.49013 1.24331 0.84752 1.08858 0.96177 0.95277 0.80750 0.77372 0.87984 1.20730 1.10837 0.92142 0.98187 1.21743 0.99781 0.94328 0.89345 1.41720 1.54801 1.04019 1.18093 1.18079 1.03223 0.86304 0.94890 1.20076 0.99505 0.88078 1.00153 1.19450 1.04891 0.92411 0.95784 1.18155 0.77495 0.84542 0.84631 1.90788 1.44362 1.86235 1.20201 1.45982 1.64454 1.06021 1.20981 1.21039 0.95140 0.80014 0.99708 0.89206 1.21782 0.98964 0.94832 1.00720 1.21455 0.96060 0.95463 1.01781 1.21202 0.95196 0.93090 1.01342 0.90275 1.22230 0.85027 0.94469 0.98191 1.86473 1.36253 1.35150 1.80018 1.21471 0.99681 0.93459 0.99925 1.21927 0.96680 0.96703 1.01508 1.20687 1.00582 0.97315 0.94725 1.20202 0.98793 0.90509 0.99661 1.19171 1.01031 0.93065 0.93623 0.77586 0.87155 1.18095 1.17897 0.80455 0.74010 0.84636 0.76440 0.90861 0.91114 0.91272 0.91050 0.93561 0.93630 0.77296 0.91854 0.90799 0.91706 0.91255 0.85665 0.85246 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.10 12.88 -35.23 -0.45 -0.55 16 2 C -0.03 0.01 3.06 36.01 0.11 0.12 16 3 Si 0.68 -1.30 30.75 -169.99 -5.23 -6.52 16 4 C -0.21 -0.03 5.57 -102.74 -0.57 -0.60 16 5 C 0.08 -0.15 10.43 -16.78 -0.17 -0.32 16 6 N -0.58 0.72 6.07 -10.68 -0.06 0.66 16 7 C 0.08 0.13 7.26 -84.00 -0.61 -0.48 16 8 C -0.06 -0.14 9.61 -39.03 -0.37 -0.51 16 9 C -0.12 -0.29 5.87 -104.95 -0.62 -0.90 16 10 C 0.56 1.93 7.73 -12.44 -0.10 1.83 16 11 O -0.54 -3.69 15.97 5.29 0.08 -3.61 16 12 N -0.72 -0.43 5.03 -54.84 -0.28 -0.71 16 13 C 0.15 0.09 2.45 -67.94 -0.17 -0.08 16 14 H 0.09 0.22 7.58 -51.93 -0.39 -0.17 16 15 C -0.12 0.19 5.39 -26.73 -0.14 0.04 16 16 C -0.11 0.16 5.20 -26.73 -0.14 0.02 16 17 C -0.09 0.02 2.43 -90.62 -0.22 -0.20 16 18 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 19 C 0.08 -0.03 6.43 37.16 0.24 0.21 16 20 O -0.57 -0.54 13.19 -35.23 -0.46 -1.01 16 21 C -0.11 -0.10 5.10 -26.76 -0.14 -0.24 16 22 C -0.13 -0.15 5.49 -26.76 -0.15 -0.30 16 23 C -0.11 -0.08 9.46 -39.57 -0.37 -0.45 16 24 C -0.07 -0.10 10.03 -39.69 -0.40 -0.50 16 25 C -0.06 -0.13 6.35 -105.05 -0.67 -0.79 16 26 H 0.38 -1.40 8.70 45.56 0.40 -1.00 16 27 H 0.11 0.04 7.96 -51.93 -0.41 -0.37 16 28 H -0.26 -0.17 7.11 56.52 0.40 0.23 16 29 H -0.25 -0.43 7.11 56.52 0.40 -0.03 16 30 H 0.18 -1.01 6.35 -52.49 -0.33 -1.34 16 31 H 0.42 -1.68 8.96 -40.82 -0.37 -2.04 16 32 H 0.14 0.30 7.62 -52.49 -0.40 -0.10 16 33 H 0.40 -0.74 6.59 -40.82 -0.27 -1.01 16 34 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 35 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 36 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 37 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 38 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 39 H 0.05 -0.06 8.14 -51.93 -0.42 -0.49 16 40 H 0.38 -1.19 9.12 45.56 0.42 -0.77 16 41 H 0.06 0.07 8.14 -51.93 -0.42 -0.35 16 42 H 0.07 0.16 7.82 -51.93 -0.41 -0.25 16 43 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 44 H 0.07 0.22 8.14 -51.93 -0.42 -0.20 16 45 H 0.13 -0.25 6.36 -52.48 -0.33 -0.59 16 46 H 0.13 0.04 8.06 -52.48 -0.42 -0.39 16 LS Contribution 372.50 15.07 5.61 5.61 Total: 0.00 -10.37 372.50 -11.23 -21.59 By element: Atomic # 1 Polarization: -6.35 SS G_CDS: -5.95 Total: -12.30 kcal Atomic # 6 Polarization: 1.32 SS G_CDS: -4.49 Total: -3.16 kcal Atomic # 7 Polarization: 0.29 SS G_CDS: -0.34 Total: -0.05 kcal Atomic # 8 Polarization: -4.34 SS G_CDS: -0.83 Total: -5.17 kcal Atomic # 14 Polarization: -1.30 SS G_CDS: -5.23 Total: -6.52 kcal Total LS contribution 5.61 Total: 5.61 kcal Total: -10.37 -11.23 -21.59 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207542_12335838.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -49.004 kcal (2) G-P(sol) polarization free energy of solvation -10.366 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -59.370 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.228 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.594 kcal (6) G-S(sol) free energy of system = (1) + (5) -70.599 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds