Wall clock time and date at job start Tue Mar 9 2021 12:53:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86302 * 109.47252 * 2 1 4 4 C 1.50701 * 109.46981 * 119.99878 * 2 1 3 5 5 C 1.34460 * 126.48215 * 255.02274 * 4 2 1 6 6 N 1.36560 * 109.98430 * 179.97438 * 5 4 2 7 7 C 1.37835 * 109.86143 * 0.02562 * 6 5 4 8 8 C 1.38644 * 133.38128 * 179.97438 * 7 6 5 9 9 C 1.39318 * 119.66344 * 180.02562 * 8 7 6 10 10 C 1.47584 * 119.82700 * 180.02562 * 9 8 7 11 11 O 1.21586 * 120.00460 * 0.02562 * 10 9 8 12 12 N 1.34785 * 119.99614 * 180.02562 * 10 9 8 13 13 C 1.46495 * 119.99668 * 180.02562 * 12 10 9 14 14 H 1.09000 * 109.47536 * 35.00373 * 13 12 10 15 15 C 1.52998 * 109.46941 * 155.00137 * 13 12 10 16 16 C 1.53001 * 109.47141 * 179.97438 * 15 13 12 17 17 C 1.52995 * 109.47456 * 300.00111 * 16 15 13 18 18 H 1.09005 * 109.47359 * 300.00509 * 17 16 15 19 19 C 1.53001 * 109.47456 * 179.97438 * 17 16 15 20 20 O 1.42904 * 109.47168 * 175.00080 * 19 17 16 21 21 C 1.52998 * 109.47036 * 59.99825 * 17 16 15 22 22 C 1.52995 * 109.47473 * 275.00136 * 13 12 10 23 23 C 1.40193 * 120.34016 * 0.02562 * 9 8 7 24 24 C 1.36235 * 120.37705 * 359.97438 * 23 9 8 25 25 C 1.39872 * 119.95826 * 359.97438 * 24 23 9 26 26 H 0.96694 * 113.99839 * 300.00451 * 1 2 3 27 27 H 1.08994 * 109.47217 * 240.00041 * 2 1 3 28 28 H 1.48501 * 110.00205 * 178.67922 * 3 2 1 29 29 H 1.48503 * 109.99901 * 300.00008 * 3 2 1 30 30 H 1.07999 * 125.00823 * 359.96118 * 5 4 2 31 31 H 0.97003 * 125.06819 * 180.26859 * 6 5 4 32 32 H 1.08001 * 120.16835 * 0.02562 * 8 7 6 33 33 H 0.97001 * 119.99948 * 0.02562 * 12 10 9 34 34 H 1.09000 * 109.47260 * 300.00347 * 15 13 12 35 35 H 1.09003 * 109.47222 * 60.00093 * 15 13 12 36 36 H 1.09000 * 109.47353 * 60.00226 * 16 15 13 37 37 H 1.09002 * 109.47055 * 180.02562 * 16 15 13 38 38 H 1.08997 * 109.47085 * 295.00137 * 19 17 16 39 39 H 1.08998 * 109.46562 * 54.99917 * 19 17 16 40 40 H 0.96689 * 114.00034 * 179.97438 * 20 19 17 41 41 H 1.09003 * 109.47222 * 60.00173 * 21 17 16 42 42 H 1.08997 * 109.47116 * 180.02562 * 21 17 16 43 43 H 1.09005 * 109.47359 * 300.00744 * 22 13 12 44 44 H 1.09002 * 109.47026 * 60.00171 * 22 13 12 45 45 H 1.08006 * 119.81294 * 179.97438 * 23 9 8 46 46 H 1.08004 * 120.02005 * 179.97438 * 24 23 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.4612 -0.1362 2.3248 6 7 2.8026 -1.0945 3.2358 7 6 2.4945 -2.3431 2.7398 8 6 2.6312 -3.6279 3.2426 9 6 2.2145 -4.7155 2.4782 10 6 2.3579 -6.0846 3.0101 11 8 2.8382 -6.2612 4.1131 12 7 1.9563 -7.1394 2.2733 13 6 2.0981 -8.4984 2.8015 14 1 1.9326 -8.4886 3.8788 15 6 1.0691 -9.4142 2.1358 16 6 1.2176 -10.8337 2.6870 17 6 2.6269 -11.3507 2.3918 18 1 2.7922 -11.3602 1.3144 19 6 2.7756 -12.7700 2.9436 20 8 4.0497 -13.2964 2.5672 21 6 3.6559 -10.4349 3.0575 22 6 3.5075 -9.0157 2.5068 23 6 1.6597 -4.5160 1.2062 24 6 1.5217 -3.2570 0.7045 25 6 1.9344 -2.1548 1.4604 26 1 -0.3933 0.4417 0.7650 27 1 1.7924 -0.5138 -0.8899 28 1 3.5347 1.7703 0.0322 29 1 1.5615 2.4679 -1.2085 30 1 2.5970 0.9263 2.4628 31 1 3.1993 -0.9221 4.1040 32 1 3.0586 -3.7848 4.2220 33 1 1.5735 -6.9985 1.3932 34 1 0.0650 -9.0456 2.3457 35 1 1.2346 -9.4241 1.0585 36 1 1.0523 -10.8243 3.7644 37 1 0.4847 -11.4863 2.2124 38 1 2.6987 -12.7471 4.0306 39 1 1.9865 -13.4024 2.5367 40 1 4.2131 -14.1952 2.8841 41 1 3.4907 -10.4254 4.1349 42 1 4.6600 -10.8030 2.8468 43 1 3.6731 -9.0255 1.4294 44 1 4.2406 -8.3633 2.9811 45 1 1.3399 -5.3654 0.6207 46 1 1.0939 -3.1100 -0.2762 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7207542_12335838.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:52 Heat of formation + Delta-G solvation = -73.972482 kcal Electronic energy + Delta-G solvation = -27697.044610 eV Core-core repulsion = 23745.546489 eV Total energy + Delta-G solvation = -3951.498121 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.162 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -42.46240 -41.21698 -39.67567 -37.92566 -37.51507 -37.34874 -35.29458 -33.24852 -31.89496 -31.74861 -30.72282 -30.15768 -26.63373 -26.24483 -24.48377 -23.81348 -23.61176 -22.17890 -21.48885 -20.90325 -20.69230 -19.38297 -18.44853 -18.10689 -17.80621 -17.20733 -16.95662 -16.43917 -16.25346 -15.94664 -15.83806 -15.55805 -15.51268 -15.19928 -14.98533 -14.91214 -14.76362 -14.54798 -14.37438 -14.02038 -13.95928 -13.56366 -13.19128 -13.08889 -12.97733 -12.66451 -12.30121 -12.28673 -12.25045 -12.13593 -11.92932 -11.61691 -11.45580 -11.32413 -11.03186 -10.83044 -10.78744 -10.29160 -10.15262 -9.37119 -8.79129 -4.97069 -0.33100 0.36031 1.38939 1.42054 1.71812 1.89183 1.91998 2.05845 2.25577 2.85643 3.30119 3.55802 3.62259 3.63980 3.73173 3.77537 3.88570 3.91532 3.96077 4.00388 4.11981 4.28244 4.29654 4.33822 4.40440 4.48063 4.48916 4.51234 4.53143 4.58428 4.61002 4.70634 4.77196 4.82622 4.94233 4.95467 5.05993 5.07534 5.13190 5.18662 5.21807 5.35606 5.39572 5.41798 5.46671 5.53074 5.61243 5.97480 6.46227 6.54513 6.88801 6.91182 7.13081 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.561 6.561 2 C -0.039 4.039 3 Si 0.795 3.205 4 C -0.235 4.235 5 C 0.097 3.903 6 N -0.577 5.577 7 C 0.066 3.934 8 C -0.067 4.067 9 C -0.138 4.138 10 C 0.561 3.439 11 O -0.582 6.582 12 N -0.709 5.709 13 C 0.147 3.853 14 H 0.069 0.931 15 C -0.118 4.118 16 C -0.106 4.106 17 C -0.087 4.087 18 H 0.074 0.926 19 C 0.076 3.924 20 O -0.597 6.597 21 C -0.103 4.103 22 C -0.124 4.124 23 C -0.107 4.107 24 C -0.086 4.086 25 C -0.082 4.082 26 H 0.393 0.607 27 H 0.096 0.904 28 H -0.285 1.285 29 H -0.305 1.305 30 H 0.220 0.780 31 H 0.435 0.565 32 H 0.128 0.872 33 H 0.414 0.586 34 H 0.082 0.918 35 H 0.084 0.916 36 H 0.067 0.933 37 H 0.087 0.913 38 H 0.050 0.950 39 H 0.060 0.940 40 H 0.395 0.605 41 H 0.057 0.943 42 H 0.058 0.942 43 H 0.071 0.929 44 H 0.042 0.958 45 H 0.151 0.849 46 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.276 2.043 0.366 3.878 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.369 6.369 2 C -0.149 4.149 3 Si 0.700 3.300 4 C -0.242 4.242 5 C -0.033 4.033 6 N -0.180 5.180 7 C -0.041 4.041 8 C -0.088 4.088 9 C -0.142 4.142 10 C 0.350 3.650 11 O -0.464 6.464 12 N -0.360 5.360 13 C 0.042 3.958 14 H 0.087 0.913 15 C -0.156 4.156 16 C -0.144 4.144 17 C -0.106 4.106 18 H 0.093 0.907 19 C -0.002 4.002 20 O -0.405 6.405 21 C -0.141 4.141 22 C -0.163 4.163 23 C -0.127 4.127 24 C -0.105 4.105 25 C -0.087 4.087 26 H 0.243 0.757 27 H 0.114 0.886 28 H -0.212 1.212 29 H -0.234 1.234 30 H 0.236 0.764 31 H 0.275 0.725 32 H 0.146 0.854 33 H 0.252 0.748 34 H 0.101 0.899 35 H 0.102 0.898 36 H 0.086 0.914 37 H 0.106 0.894 38 H 0.068 0.932 39 H 0.078 0.922 40 H 0.245 0.755 41 H 0.076 0.924 42 H 0.077 0.923 43 H 0.090 0.910 44 H 0.061 0.939 45 H 0.169 0.831 46 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges -2.278 2.783 0.028 3.597 hybrid contribution 0.368 -1.160 0.185 1.231 sum -1.909 1.624 0.213 2.516 Atomic orbital electron populations 1.86460 1.17857 1.82307 1.50269 1.24542 0.84636 1.10195 0.95501 0.94061 0.77072 0.73586 0.85249 1.20858 1.12587 0.91458 0.99335 1.22369 0.97097 0.95791 0.88000 1.41821 1.54206 1.03221 1.18794 1.18113 1.03884 0.86884 0.95213 1.20134 0.99805 0.88870 1.00034 1.19474 1.06238 0.91784 0.96719 1.18403 0.76923 0.85457 0.84214 1.90757 1.46608 1.86861 1.22132 1.45897 1.63354 1.05540 1.21231 1.21024 0.95508 0.80362 0.98880 0.91327 1.21758 0.98453 0.94176 1.01198 1.21449 0.95459 0.95553 1.01945 1.21190 0.95491 0.93117 1.00794 0.90727 1.22307 0.84970 0.94384 0.98513 1.86432 1.37032 1.36589 1.80447 1.21407 0.99474 0.93544 0.99719 1.21850 0.96474 0.96405 1.01531 1.20891 0.99625 0.98100 0.94073 1.20400 0.99221 0.90758 1.00114 1.19584 1.00903 0.94342 0.93875 0.75707 0.88650 1.21241 1.23363 0.76410 0.72471 0.85423 0.74808 0.89903 0.89776 0.91377 0.89414 0.93190 0.92202 0.75531 0.92449 0.92314 0.91043 0.93893 0.83143 0.84511 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.05 12.88 -148.98 -1.92 -1.97 16 2 C -0.04 0.04 3.06 71.24 0.22 0.26 16 3 Si 0.79 -3.74 30.75 68.60 2.11 -1.63 16 4 C -0.24 0.05 5.57 -18.64 -0.10 -0.05 16 5 C 0.10 -0.53 10.43 83.09 0.87 0.34 16 6 N -0.58 1.77 6.07 -187.71 -1.14 0.63 16 7 C 0.07 0.25 7.26 38.95 0.28 0.54 16 8 C -0.07 -0.44 9.61 22.63 0.22 -0.23 16 9 C -0.14 -0.86 5.87 -20.08 -0.12 -0.98 16 10 C 0.56 4.89 7.73 86.71 0.67 5.56 16 11 O -0.58 -9.71 15.97 -3.99 -0.06 -9.77 16 12 N -0.71 -1.43 5.03 -445.66 -2.24 -3.67 16 13 C 0.15 0.32 2.45 44.99 0.11 0.43 16 14 H 0.07 0.47 7.58 -2.39 -0.02 0.46 16 15 C -0.12 0.44 5.39 30.59 0.16 0.60 16 16 C -0.11 0.39 5.20 30.59 0.16 0.55 16 17 C -0.09 0.03 2.43 -10.80 -0.03 0.00 16 18 H 0.07 0.06 8.14 -2.38 -0.02 0.04 16 19 C 0.08 -0.08 6.43 71.98 0.46 0.39 16 20 O -0.60 -1.27 13.19 -148.98 -1.97 -3.24 16 21 C -0.10 -0.35 5.10 30.58 0.16 -0.19 16 22 C -0.12 -0.50 5.49 30.58 0.17 -0.33 16 23 C -0.11 -0.21 9.46 22.28 0.21 0.00 16 24 C -0.09 -0.29 10.03 22.20 0.22 -0.07 16 25 C -0.08 -0.36 6.35 -20.14 -0.13 -0.49 16 26 H 0.39 -3.26 8.70 -74.06 -0.64 -3.90 16 27 H 0.10 0.13 7.96 -2.39 -0.02 0.11 16 28 H -0.29 -0.06 7.11 99.48 0.71 0.64 16 29 H -0.31 -1.18 7.11 99.48 0.71 -0.47 16 30 H 0.22 -3.19 6.35 -2.91 -0.02 -3.20 16 31 H 0.43 -3.78 8.96 -92.71 -0.83 -4.61 16 32 H 0.13 0.92 7.62 -2.91 -0.02 0.89 16 33 H 0.41 -1.64 6.59 -92.71 -0.61 -2.25 16 34 H 0.08 -0.41 8.14 -2.39 -0.02 -0.43 16 35 H 0.08 -0.49 8.14 -2.39 -0.02 -0.51 16 36 H 0.07 -0.21 8.14 -2.39 -0.02 -0.23 16 37 H 0.09 -0.55 8.14 -2.39 -0.02 -0.57 16 38 H 0.05 -0.10 8.14 -2.39 -0.02 -0.12 16 39 H 0.06 -0.23 8.14 -2.39 -0.02 -0.25 16 40 H 0.40 -2.41 9.12 -74.06 -0.68 -3.09 16 41 H 0.06 0.25 8.14 -2.39 -0.02 0.23 16 42 H 0.06 0.37 7.82 -2.39 -0.02 0.35 16 43 H 0.07 0.18 8.14 -2.38 -0.02 0.16 16 44 H 0.04 0.40 8.14 -2.39 -0.02 0.38 16 45 H 0.15 -0.69 6.36 -2.91 -0.02 -0.71 16 46 H 0.14 0.15 8.06 -2.91 -0.02 0.12 16 Total: 0.00 -26.89 372.50 -3.36 -30.25 By element: Atomic # 1 Polarization: -15.27 SS G_CDS: -1.68 Total: -16.95 kcal Atomic # 6 Polarization: 2.81 SS G_CDS: 3.53 Total: 6.34 kcal Atomic # 7 Polarization: 0.34 SS G_CDS: -3.38 Total: -3.04 kcal Atomic # 8 Polarization: -11.03 SS G_CDS: -3.95 Total: -14.98 kcal Atomic # 14 Polarization: -3.74 SS G_CDS: 2.11 Total: -1.63 kcal Total: -26.89 -3.36 -30.25 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207542_12335838.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -43.720 kcal (2) G-P(sol) polarization free energy of solvation -26.888 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -70.608 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.364 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.252 kcal (6) G-S(sol) free energy of system = (1) + (5) -73.972 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds