Wall clock time and date at job start Tue Mar 9 2021 12:54:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86297 * 109.47194 * 2 1 4 4 C 1.50695 * 109.47367 * 239.99660 * 2 1 3 5 5 C 1.38323 * 119.92297 * 119.99667 * 4 2 1 6 6 C 1.38463 * 120.28665 * 180.02562 * 5 4 2 7 7 Br 1.89096 * 119.93836 * 180.02562 * 6 5 4 8 8 C 1.38033 * 120.12365 * 359.97438 * 6 5 4 9 9 C 1.39581 * 119.84069 * 0.28278 * 8 6 5 10 10 C 1.47846 * 120.13886 * 179.74118 * 9 8 6 11 11 O 1.21547 * 120.00060 * 179.97438 * 10 9 8 12 12 N 1.34778 * 119.99745 * 359.97438 * 10 9 8 13 13 C 1.46510 * 119.99711 * 179.97438 * 12 10 9 14 14 H 1.09003 * 109.46702 * 35.00553 * 13 12 10 15 15 C 1.52999 * 109.46758 * 155.00274 * 13 12 10 16 16 C 1.53001 * 109.46912 * 180.02562 * 15 13 12 17 17 C 1.53002 * 109.46693 * 299.99733 * 16 15 13 18 18 H 1.08997 * 109.47250 * 299.99719 * 17 16 15 19 19 C 1.53001 * 109.46693 * 179.97438 * 17 16 15 20 20 O 1.42900 * 109.46999 * 175.00093 * 19 17 16 21 21 C 1.52999 * 109.47223 * 60.00458 * 17 16 15 22 22 C 1.52993 * 109.47212 * 275.00186 * 13 12 10 23 23 C 1.37987 * 119.92494 * 300.02843 * 4 2 1 24 24 H 0.96701 * 113.99785 * 60.00437 * 1 2 3 25 25 H 1.09004 * 109.46951 * 120.00087 * 2 1 3 26 26 H 1.48497 * 109.99910 * 298.68350 * 3 2 1 27 27 H 1.48503 * 109.99941 * 59.99778 * 3 2 1 28 28 H 1.08007 * 119.85419 * 0.03201 * 5 4 2 29 29 H 1.08002 * 120.07619 * 179.97438 * 8 6 5 30 30 H 0.96995 * 120.00017 * 0.02562 * 12 10 9 31 31 H 1.09007 * 109.46977 * 299.99934 * 15 13 12 32 32 H 1.08993 * 109.47200 * 60.00107 * 15 13 12 33 33 H 1.08997 * 109.47043 * 59.99578 * 16 15 13 34 34 H 1.08999 * 109.46868 * 180.02562 * 16 15 13 35 35 H 1.09000 * 109.47613 * 295.00147 * 19 17 16 36 36 H 1.09001 * 109.47315 * 55.00673 * 19 17 16 37 37 H 0.96698 * 114.00095 * 180.02562 * 20 19 17 38 38 H 1.09003 * 109.47286 * 59.99161 * 21 17 16 39 39 H 1.08998 * 109.46926 * 179.97438 * 21 17 16 40 40 H 1.08998 * 109.47621 * 300.00307 * 22 13 12 41 41 H 1.09002 * 109.47342 * 59.99782 * 22 13 12 42 42 H 1.07998 * 120.06326 * 359.97438 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.7265 -0.0367 -2.1399 6 6 3.1918 -0.6820 -3.2731 7 35 4.2787 0.2483 -4.5096 8 6 2.8646 -2.0034 -3.5015 9 6 2.0581 -2.6867 -2.5899 10 6 1.6989 -4.1005 -2.8308 11 8 0.9969 -4.6933 -2.0351 12 7 2.1499 -4.7320 -3.9328 13 6 1.7943 -6.1331 -4.1713 14 1 0.7826 -6.3177 -3.8100 15 6 1.8622 -6.4283 -5.6710 16 6 1.4903 -7.8913 -5.9201 17 6 2.4708 -8.8005 -5.1765 18 1 3.4826 -8.6162 -5.5378 19 6 2.0986 -10.2635 -5.4251 20 8 3.0803 -11.1129 -4.8279 21 6 2.4030 -8.5053 -3.6768 22 6 2.7752 -7.0418 -3.4278 23 6 1.5966 -2.0314 -1.4474 24 1 -0.3933 0.4417 -0.7651 25 1 1.7923 -0.5139 0.8900 26 1 1.5878 2.4585 -1.2242 27 1 1.5614 2.4679 1.2085 28 1 2.9855 0.9972 -1.9652 29 1 3.2276 -2.5059 -4.3859 30 1 2.7104 -4.2590 -4.5676 31 1 1.1633 -5.7808 -6.2007 32 1 2.8738 -6.2436 -6.0322 33 1 0.4785 -8.0756 -5.5589 34 1 1.5390 -8.1017 -6.9885 35 1 1.1231 -10.4702 -4.9848 36 1 2.0600 -10.4514 -6.4981 37 1 2.9082 -12.0570 -4.9466 38 1 1.3912 -8.6896 -3.3156 39 1 3.1013 -9.1533 -3.1471 40 1 3.7869 -6.8572 -3.7890 41 1 2.7270 -6.8315 -2.3593 42 1 0.9757 -2.5560 -0.7364 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207542_12335870.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:16 Heat of formation + Delta-G solvation = -99.776074 kcal Electronic energy + Delta-G solvation = -25118.358348 eV Core-core repulsion = 21303.339107 eV Total energy + Delta-G solvation = -3815.019241 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.061 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -41.66475 -40.49889 -39.38695 -37.84166 -37.44962 -35.33623 -33.65389 -33.30031 -31.84675 -31.15487 -30.50054 -27.14093 -26.62631 -24.86018 -23.84641 -22.85538 -22.24663 -21.45344 -20.84456 -19.21833 -18.28727 -18.05967 -17.62791 -17.40514 -16.69589 -16.49570 -16.30059 -15.88495 -15.85865 -15.67649 -15.13995 -15.09567 -14.95462 -14.59468 -14.25496 -14.20337 -14.01485 -13.54092 -13.31642 -13.21494 -13.05197 -13.02551 -12.34222 -12.26913 -12.20248 -12.00042 -11.85048 -11.67583 -11.49941 -11.48385 -11.32770 -11.03916 -10.88734 -10.73273 -10.35631 -10.08676 -9.94289 -5.07507 -0.52524 -0.20620 0.37277 1.12262 1.48240 1.58441 1.85538 1.98049 2.49124 3.15103 3.16812 3.26688 3.36484 3.55785 3.69004 3.74977 3.81590 3.89265 3.92596 3.94909 4.18468 4.19345 4.23235 4.30042 4.37717 4.41216 4.47313 4.47982 4.53391 4.57504 4.70281 4.74690 4.87702 4.90432 4.95135 5.01414 5.05484 5.09841 5.23384 5.31407 5.36590 5.39490 5.47714 6.27681 6.36326 6.66201 7.09871 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.524 6.524 2 C -0.074 4.074 3 Si 0.680 3.320 4 C -0.118 4.118 5 C -0.064 4.064 6 C -0.094 4.094 7 Br -0.033 7.033 8 C -0.054 4.054 9 C -0.127 4.127 10 C 0.562 3.438 11 O -0.526 6.526 12 N -0.722 5.722 13 C 0.145 3.855 14 H 0.091 0.909 15 C -0.125 4.125 16 C -0.110 4.110 17 C -0.090 4.090 18 H 0.079 0.921 19 C 0.079 3.921 20 O -0.573 6.573 21 C -0.108 4.108 22 C -0.130 4.130 23 C -0.018 4.018 24 H 0.377 0.623 25 H 0.126 0.874 26 H -0.255 1.255 27 H -0.250 1.250 28 H 0.142 0.858 29 H 0.138 0.862 30 H 0.399 0.601 31 H 0.073 0.927 32 H 0.071 0.929 33 H 0.069 0.931 34 H 0.071 0.929 35 H 0.046 0.954 36 H 0.046 0.954 37 H 0.380 0.620 38 H 0.063 0.937 39 H 0.074 0.926 40 H 0.065 0.935 41 H 0.069 0.931 42 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.221 -0.053 -3.789 4.392 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.331 6.331 2 C -0.184 4.184 3 Si 0.580 3.420 4 C -0.119 4.119 5 C -0.084 4.084 6 C -0.174 4.174 7 Br 0.053 6.947 8 C -0.074 4.074 9 C -0.131 4.131 10 C 0.348 3.652 11 O -0.402 6.402 12 N -0.374 5.374 13 C 0.041 3.959 14 H 0.110 0.890 15 C -0.163 4.163 16 C -0.148 4.148 17 C -0.108 4.108 18 H 0.098 0.902 19 C 0.001 3.999 20 O -0.379 6.379 21 C -0.146 4.146 22 C -0.168 4.168 23 C -0.037 4.037 24 H 0.225 0.775 25 H 0.144 0.856 26 H -0.180 1.180 27 H -0.175 1.175 28 H 0.159 0.841 29 H 0.156 0.844 30 H 0.235 0.765 31 H 0.091 0.909 32 H 0.090 0.910 33 H 0.088 0.912 34 H 0.090 0.910 35 H 0.065 0.935 36 H 0.064 0.936 37 H 0.227 0.773 38 H 0.082 0.918 39 H 0.093 0.907 40 H 0.084 0.916 41 H 0.088 0.912 42 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 2.245 0.969 -2.973 3.849 hybrid contribution -1.208 -0.679 -0.879 1.641 sum 1.037 0.290 -3.851 3.999 Atomic orbital electron populations 1.86645 1.17178 1.79893 1.49339 1.25057 0.84341 1.11064 0.97894 0.95081 0.91629 0.74264 0.81017 1.20322 0.99302 0.94811 0.97475 1.21214 0.95229 0.99964 0.91946 1.21641 1.02983 0.95611 0.97160 1.96845 1.65705 1.75424 1.56736 1.21289 0.95131 0.92533 0.98468 1.19987 1.01686 0.94407 0.97065 1.18098 0.79830 0.85773 0.81479 1.90823 1.37153 1.67166 1.45096 1.46012 1.53463 1.13354 1.24534 1.21091 1.00146 0.79305 0.95379 0.89048 1.21786 1.02738 0.97208 0.94587 1.21458 0.99393 0.93364 1.00564 1.21203 1.00434 0.92720 0.96477 0.90243 1.22226 0.90960 0.90422 0.96322 1.86471 1.50908 1.20598 1.79915 1.21490 1.02358 0.95437 0.95272 1.21942 0.99056 0.94725 1.01092 1.21305 0.94427 0.92890 0.95063 0.77478 0.85646 1.17987 1.17502 0.84054 0.84390 0.76548 0.90869 0.91047 0.91236 0.90988 0.93549 0.93620 0.77251 0.91809 0.90696 0.91618 0.91190 0.83380 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.36 12.76 -35.23 -0.45 -0.81 16 2 C -0.07 0.07 2.82 36.00 0.10 0.17 16 3 Si 0.68 -1.11 29.78 -169.99 -5.06 -6.17 16 4 C -0.12 0.06 5.38 -104.69 -0.56 -0.50 16 5 C -0.06 0.07 8.41 -39.47 -0.33 -0.27 16 6 C -0.09 0.07 6.22 -39.57 -0.25 -0.18 16 7 Br -0.03 0.02 33.69 -68.01 -2.29 -2.27 16 8 C -0.05 0.06 9.28 -39.16 -0.36 -0.30 16 9 C -0.13 -0.07 5.87 -104.97 -0.62 -0.69 16 10 C 0.56 1.14 7.74 -12.33 -0.10 1.04 16 11 O -0.53 -3.03 16.01 5.32 0.09 -2.94 16 12 N -0.72 0.47 5.03 -54.75 -0.28 0.19 16 13 C 0.14 -0.05 2.45 -67.93 -0.17 -0.22 16 14 H 0.09 0.14 7.58 -51.93 -0.39 -0.25 16 15 C -0.13 0.29 5.39 -26.73 -0.14 0.14 16 16 C -0.11 0.23 5.20 -26.73 -0.14 0.09 16 17 C -0.09 0.07 2.43 -90.62 -0.22 -0.15 16 18 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 19 C 0.08 -0.07 6.43 37.16 0.24 0.17 16 20 O -0.57 -0.30 13.19 -35.23 -0.46 -0.76 16 21 C -0.11 -0.03 5.10 -26.71 -0.14 -0.17 16 22 C -0.13 -0.04 5.50 -26.71 -0.15 -0.18 16 23 C -0.02 -0.02 9.15 -39.18 -0.36 -0.37 16 24 H 0.38 -0.83 8.70 45.56 0.40 -0.43 16 25 H 0.13 -0.21 7.96 -51.93 -0.41 -0.62 16 26 H -0.26 -0.04 7.11 56.52 0.40 0.36 16 27 H -0.25 -0.42 7.11 56.52 0.40 -0.02 16 28 H 0.14 -0.34 4.86 -52.48 -0.26 -0.60 16 29 H 0.14 -0.46 6.41 -52.49 -0.34 -0.80 16 30 H 0.40 -1.26 6.64 -40.82 -0.27 -1.53 16 31 H 0.07 -0.19 8.14 -51.92 -0.42 -0.61 16 32 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 33 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 34 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 35 H 0.05 -0.06 8.14 -51.93 -0.42 -0.49 16 36 H 0.05 -0.08 8.14 -51.93 -0.42 -0.50 16 37 H 0.38 -1.33 9.12 45.56 0.42 -0.91 16 38 H 0.06 0.04 8.14 -51.93 -0.42 -0.39 16 39 H 0.07 0.12 7.82 -51.93 -0.41 -0.29 16 40 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 41 H 0.07 0.16 8.14 -51.93 -0.42 -0.27 16 42 H 0.15 0.28 7.65 -52.49 -0.40 -0.12 16 LS Contribution 360.20 15.07 5.43 5.43 Total: 0.00 -7.59 360.20 -11.31 -18.89 By element: Atomic # 1 Polarization: -5.06 SS G_CDS: -5.09 Total: -10.15 kcal Atomic # 6 Polarization: 1.77 SS G_CDS: -3.19 Total: -1.41 kcal Atomic # 7 Polarization: 0.47 SS G_CDS: -0.28 Total: 0.19 kcal Atomic # 8 Polarization: -3.69 SS G_CDS: -0.83 Total: -4.52 kcal Atomic # 14 Polarization: -1.11 SS G_CDS: -5.06 Total: -6.17 kcal Atomic # 35 Polarization: 0.02 SS G_CDS: -2.29 Total: -2.27 kcal Total LS contribution 5.43 Total: 5.43 kcal Total: -7.59 -11.31 -18.89 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207542_12335870.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -80.883 kcal (2) G-P(sol) polarization free energy of solvation -7.585 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -88.468 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.308 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.893 kcal (6) G-S(sol) free energy of system = (1) + (5) -99.776 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds