Wall clock time and date at job start Tue Mar 9 2021 12:54:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86297 * 109.47194 * 2 1 4 4 C 1.50695 * 109.47367 * 239.99660 * 2 1 3 5 5 C 1.38323 * 119.92297 * 119.99667 * 4 2 1 6 6 C 1.38463 * 120.28665 * 180.02562 * 5 4 2 7 7 Br 1.89096 * 119.93836 * 180.02562 * 6 5 4 8 8 C 1.38033 * 120.12365 * 359.97438 * 6 5 4 9 9 C 1.39581 * 119.84069 * 0.28278 * 8 6 5 10 10 C 1.47846 * 120.13886 * 179.74118 * 9 8 6 11 11 O 1.21547 * 120.00060 * 179.97438 * 10 9 8 12 12 N 1.34778 * 119.99745 * 359.97438 * 10 9 8 13 13 C 1.46510 * 119.99711 * 179.97438 * 12 10 9 14 14 H 1.09003 * 109.46702 * 35.00553 * 13 12 10 15 15 C 1.52999 * 109.46758 * 155.00274 * 13 12 10 16 16 C 1.53001 * 109.46912 * 180.02562 * 15 13 12 17 17 C 1.53002 * 109.46693 * 299.99733 * 16 15 13 18 18 H 1.08997 * 109.47250 * 299.99719 * 17 16 15 19 19 C 1.53001 * 109.46693 * 179.97438 * 17 16 15 20 20 O 1.42900 * 109.46999 * 175.00093 * 19 17 16 21 21 C 1.52999 * 109.47223 * 60.00458 * 17 16 15 22 22 C 1.52993 * 109.47212 * 275.00186 * 13 12 10 23 23 C 1.37987 * 119.92494 * 300.02843 * 4 2 1 24 24 H 0.96701 * 113.99785 * 60.00437 * 1 2 3 25 25 H 1.09004 * 109.46951 * 120.00087 * 2 1 3 26 26 H 1.48497 * 109.99910 * 298.68350 * 3 2 1 27 27 H 1.48503 * 109.99941 * 59.99778 * 3 2 1 28 28 H 1.08007 * 119.85419 * 0.03201 * 5 4 2 29 29 H 1.08002 * 120.07619 * 179.97438 * 8 6 5 30 30 H 0.96995 * 120.00017 * 0.02562 * 12 10 9 31 31 H 1.09007 * 109.46977 * 299.99934 * 15 13 12 32 32 H 1.08993 * 109.47200 * 60.00107 * 15 13 12 33 33 H 1.08997 * 109.47043 * 59.99578 * 16 15 13 34 34 H 1.08999 * 109.46868 * 180.02562 * 16 15 13 35 35 H 1.09000 * 109.47613 * 295.00147 * 19 17 16 36 36 H 1.09001 * 109.47315 * 55.00673 * 19 17 16 37 37 H 0.96698 * 114.00095 * 180.02562 * 20 19 17 38 38 H 1.09003 * 109.47286 * 59.99161 * 21 17 16 39 39 H 1.08998 * 109.46926 * 179.97438 * 21 17 16 40 40 H 1.08998 * 109.47621 * 300.00307 * 22 13 12 41 41 H 1.09002 * 109.47342 * 59.99782 * 22 13 12 42 42 H 1.07998 * 120.06326 * 359.97438 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.7265 -0.0367 -2.1399 6 6 3.1918 -0.6820 -3.2731 7 35 4.2787 0.2483 -4.5096 8 6 2.8646 -2.0034 -3.5015 9 6 2.0581 -2.6867 -2.5899 10 6 1.6989 -4.1005 -2.8308 11 8 0.9969 -4.6933 -2.0351 12 7 2.1499 -4.7320 -3.9328 13 6 1.7943 -6.1331 -4.1713 14 1 0.7826 -6.3177 -3.8100 15 6 1.8622 -6.4283 -5.6710 16 6 1.4903 -7.8913 -5.9201 17 6 2.4708 -8.8005 -5.1765 18 1 3.4826 -8.6162 -5.5378 19 6 2.0986 -10.2635 -5.4251 20 8 3.0803 -11.1129 -4.8279 21 6 2.4030 -8.5053 -3.6768 22 6 2.7752 -7.0418 -3.4278 23 6 1.5966 -2.0314 -1.4474 24 1 -0.3933 0.4417 -0.7651 25 1 1.7923 -0.5139 0.8900 26 1 1.5878 2.4585 -1.2242 27 1 1.5614 2.4679 1.2085 28 1 2.9855 0.9972 -1.9652 29 1 3.2276 -2.5059 -4.3859 30 1 2.7104 -4.2590 -4.5676 31 1 1.1633 -5.7808 -6.2007 32 1 2.8738 -6.2436 -6.0322 33 1 0.4785 -8.0756 -5.5589 34 1 1.5390 -8.1017 -6.9885 35 1 1.1231 -10.4702 -4.9848 36 1 2.0600 -10.4514 -6.4981 37 1 2.9082 -12.0570 -4.9466 38 1 1.3912 -8.6896 -3.3156 39 1 3.1013 -9.1533 -3.1471 40 1 3.7869 -6.8572 -3.7890 41 1 2.7270 -6.8315 -2.3593 42 1 0.9757 -2.5560 -0.7364 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7207542_12335870.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:15 Heat of formation + Delta-G solvation = -99.723314 kcal Electronic energy + Delta-G solvation = -25118.356060 eV Core-core repulsion = 21303.339107 eV Total energy + Delta-G solvation = -3815.016953 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.061 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -41.72360 -40.48370 -39.43185 -37.84307 -37.45341 -35.41141 -33.62807 -33.29536 -31.80735 -31.13560 -30.45676 -27.10558 -26.60911 -24.86715 -23.79926 -22.83278 -22.21203 -21.52995 -20.81438 -19.22632 -18.25150 -18.04711 -17.66608 -17.40063 -16.67262 -16.51766 -16.27614 -15.95198 -15.84163 -15.68155 -15.14928 -15.07323 -14.97405 -14.58158 -14.25118 -14.17093 -13.99416 -13.54206 -13.30274 -13.18621 -13.04246 -12.98776 -12.34039 -12.26342 -12.13829 -11.97473 -11.85105 -11.65712 -11.47020 -11.43629 -11.32613 -11.11703 -10.83218 -10.73263 -10.38149 -10.11228 -9.91317 -4.97866 -0.52734 -0.17344 0.42512 1.19835 1.51589 1.54771 1.89033 1.96849 2.45271 3.23861 3.27814 3.33458 3.43822 3.60907 3.75088 3.79216 3.86361 3.93008 3.95548 4.01061 4.20049 4.27338 4.29665 4.34506 4.40365 4.47961 4.51226 4.53972 4.59276 4.69961 4.75165 4.82330 4.91557 4.93742 5.02504 5.07523 5.09421 5.13449 5.19906 5.32324 5.37039 5.39578 5.48148 6.35952 6.41296 6.88889 7.02948 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.084 4.084 3 Si 0.763 3.237 4 C -0.114 4.114 5 C -0.061 4.061 6 C -0.099 4.099 7 Br -0.027 7.027 8 C -0.044 4.044 9 C -0.136 4.136 10 C 0.559 3.441 11 O -0.573 6.573 12 N -0.707 5.707 13 C 0.146 3.854 14 H 0.069 0.931 15 C -0.118 4.118 16 C -0.107 4.107 17 C -0.087 4.087 18 H 0.076 0.924 19 C 0.075 3.925 20 O -0.596 6.596 21 C -0.104 4.104 22 C -0.124 4.124 23 C -0.030 4.030 24 H 0.388 0.612 25 H 0.130 0.870 26 H -0.273 1.273 27 H -0.297 1.297 28 H 0.157 0.843 29 H 0.162 0.838 30 H 0.414 0.586 31 H 0.083 0.917 32 H 0.086 0.914 33 H 0.067 0.933 34 H 0.087 0.913 35 H 0.049 0.951 36 H 0.059 0.941 37 H 0.395 0.605 38 H 0.056 0.944 39 H 0.059 0.941 40 H 0.074 0.926 41 H 0.044 0.956 42 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.175 0.588 -5.687 6.539 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.354 6.354 2 C -0.193 4.193 3 Si 0.667 3.333 4 C -0.115 4.115 5 C -0.080 4.080 6 C -0.178 4.178 7 Br 0.058 6.942 8 C -0.064 4.064 9 C -0.140 4.140 10 C 0.347 3.653 11 O -0.453 6.453 12 N -0.359 5.359 13 C 0.042 3.958 14 H 0.087 0.913 15 C -0.156 4.156 16 C -0.145 4.145 17 C -0.106 4.106 18 H 0.094 0.906 19 C -0.002 4.002 20 O -0.405 6.405 21 C -0.142 4.142 22 C -0.162 4.162 23 C -0.049 4.049 24 H 0.237 0.763 25 H 0.148 0.852 26 H -0.199 1.199 27 H -0.225 1.225 28 H 0.174 0.826 29 H 0.180 0.820 30 H 0.252 0.748 31 H 0.101 0.899 32 H 0.104 0.896 33 H 0.085 0.915 34 H 0.106 0.894 35 H 0.067 0.933 36 H 0.077 0.923 37 H 0.245 0.755 38 H 0.074 0.926 39 H 0.077 0.923 40 H 0.092 0.908 41 H 0.063 0.937 42 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 3.224 1.585 -4.921 6.093 hybrid contribution -1.514 -0.885 -0.258 1.773 sum 1.710 0.701 -5.180 5.500 Atomic orbital electron populations 1.86614 1.18168 1.80374 1.50222 1.25317 0.83724 1.12160 0.98081 0.94165 0.90216 0.71566 0.77360 1.20267 0.99349 0.94166 0.97712 1.21383 0.94499 1.00574 0.91538 1.21735 1.03028 0.95762 0.97307 1.96860 1.65513 1.75298 1.56493 1.21460 0.93976 0.92419 0.98553 1.19880 1.02723 0.93741 0.97653 1.18377 0.79230 0.86305 0.81428 1.90798 1.39447 1.68264 1.46787 1.45916 1.52777 1.13245 1.23930 1.21054 0.98676 0.79186 0.96871 0.91258 1.21763 1.03932 0.97293 0.92622 1.21453 0.98789 0.93030 1.01201 1.21190 1.00673 0.93362 0.95344 0.90599 1.22313 0.90768 0.90095 0.97063 1.86430 1.51644 1.22063 1.80330 1.21427 1.01390 0.95025 0.96386 1.21864 0.99727 0.95012 0.99638 1.21254 0.94881 0.93597 0.95215 0.76270 0.85204 1.19856 1.22507 0.82552 0.82042 0.74785 0.89870 0.89575 0.91472 0.89449 0.93291 0.92255 0.75536 0.92553 0.92270 0.90774 0.93738 0.85225 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.30 12.76 -148.98 -1.90 -3.20 16 2 C -0.08 0.11 2.82 71.23 0.20 0.31 16 3 Si 0.76 -2.57 29.78 68.60 2.04 -0.53 16 4 C -0.11 0.09 5.38 -19.91 -0.11 -0.02 16 5 C -0.06 0.17 8.41 22.34 0.19 0.36 16 6 C -0.10 0.25 6.22 22.27 0.14 0.39 16 7 Br -0.03 0.08 33.69 -20.37 -0.69 -0.61 16 8 C -0.04 0.13 9.28 22.55 0.21 0.34 16 9 C -0.14 -0.24 5.87 -20.09 -0.12 -0.36 16 10 C 0.56 3.01 7.74 86.79 0.67 3.68 16 11 O -0.57 -8.16 16.01 -3.86 -0.06 -8.22 16 12 N -0.71 0.77 5.03 -445.40 -2.24 -1.47 16 13 C 0.15 -0.02 2.45 44.99 0.11 0.09 16 14 H 0.07 0.34 7.58 -2.39 -0.02 0.32 16 15 C -0.12 0.67 5.39 30.59 0.16 0.83 16 16 C -0.11 0.54 5.20 30.60 0.16 0.70 16 17 C -0.09 0.14 2.43 -10.79 -0.03 0.12 16 18 H 0.08 -0.05 8.14 -2.39 -0.02 -0.07 16 19 C 0.08 -0.14 6.43 71.98 0.46 0.32 16 20 O -0.60 -0.77 13.19 -148.98 -1.97 -2.74 16 21 C -0.10 -0.20 5.10 30.61 0.16 -0.04 16 22 C -0.12 -0.23 5.50 30.61 0.17 -0.06 16 23 C -0.03 -0.09 9.15 22.53 0.21 0.11 16 24 H 0.39 -1.40 8.70 -74.06 -0.64 -2.04 16 25 H 0.13 -0.34 7.96 -2.39 -0.02 -0.36 16 26 H -0.27 0.12 7.11 99.48 0.71 0.83 16 27 H -0.30 -1.35 7.11 99.48 0.71 -0.64 16 28 H 0.16 -0.97 4.86 -2.91 -0.01 -0.99 16 29 H 0.16 -1.38 6.41 -2.91 -0.02 -1.40 16 30 H 0.41 -3.09 6.64 -92.71 -0.62 -3.70 16 31 H 0.08 -0.58 8.14 -2.38 -0.02 -0.60 16 32 H 0.09 -0.69 8.14 -2.39 -0.02 -0.71 16 33 H 0.07 -0.28 8.14 -2.39 -0.02 -0.30 16 34 H 0.09 -0.65 8.14 -2.39 -0.02 -0.67 16 35 H 0.05 -0.13 8.14 -2.39 -0.02 -0.15 16 36 H 0.06 -0.27 8.14 -2.39 -0.02 -0.29 16 37 H 0.40 -2.68 9.12 -74.06 -0.68 -3.36 16 38 H 0.06 0.18 8.14 -2.39 -0.02 0.16 16 39 H 0.06 0.30 7.82 -2.39 -0.02 0.28 16 40 H 0.07 0.00 8.14 -2.39 -0.02 -0.01 16 41 H 0.04 0.31 8.14 -2.39 -0.02 0.29 16 42 H 0.13 0.86 7.65 -2.91 -0.02 0.84 16 Total: 0.00 -19.51 360.20 -3.05 -22.57 By element: Atomic # 1 Polarization: -11.76 SS G_CDS: -0.83 Total: -12.59 kcal Atomic # 6 Polarization: 4.19 SS G_CDS: 2.58 Total: 6.78 kcal Atomic # 7 Polarization: 0.77 SS G_CDS: -2.24 Total: -1.47 kcal Atomic # 8 Polarization: -10.23 SS G_CDS: -3.93 Total: -14.16 kcal Atomic # 14 Polarization: -2.57 SS G_CDS: 2.04 Total: -0.53 kcal Atomic # 35 Polarization: 0.08 SS G_CDS: -0.69 Total: -0.61 kcal Total: -19.51 -3.05 -22.57 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207542_12335870.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -77.158 kcal (2) G-P(sol) polarization free energy of solvation -19.511 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -96.669 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.054 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.565 kcal (6) G-S(sol) free energy of system = (1) + (5) -99.723 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds