Wall clock time and date at job start Tue Mar 9 2021 12:54:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86300 * 109.46772 * 2 1 4 4 C 1.50694 * 109.47056 * 119.99617 * 2 1 3 5 5 C 1.38613 * 119.84429 * 75.00416 * 4 2 1 6 6 F 1.35103 * 119.91765 * 359.97438 * 5 4 2 7 7 C 1.38112 * 120.16615 * 180.02562 * 5 4 2 8 8 C 1.39611 * 119.85174 * 359.97438 * 7 5 4 9 9 C 1.47703 * 120.15182 * 179.97438 * 8 7 5 10 10 O 1.21571 * 119.99561 * 180.02562 * 9 8 7 11 11 N 1.34774 * 120.00226 * 0.02562 * 9 8 7 12 12 C 1.46499 * 119.99641 * 180.02562 * 11 9 8 13 13 H 1.08997 * 109.47271 * 35.00685 * 12 11 9 14 14 C 1.53004 * 109.46780 * 155.00101 * 12 11 9 15 15 C 1.52998 * 109.47287 * 180.02562 * 14 12 11 16 16 C 1.53007 * 109.46862 * 299.99959 * 15 14 12 17 17 H 1.09000 * 109.46861 * 299.99954 * 16 15 14 18 18 C 1.52998 * 109.46862 * 179.97438 * 16 15 14 19 19 O 1.42901 * 109.46827 * 174.99950 * 18 16 15 20 20 C 1.52998 * 109.47120 * 59.99627 * 16 15 14 21 21 C 1.52995 * 109.47201 * 274.99666 * 12 11 9 22 22 C 1.39837 * 119.69355 * 0.02562 * 8 7 5 23 23 F 1.35104 * 120.08701 * 179.97438 * 22 8 7 24 24 C 1.38230 * 119.84279 * 255.23499 * 4 2 1 25 25 H 0.96693 * 114.00345 * 300.00211 * 1 2 3 26 26 H 1.08997 * 109.47495 * 239.99679 * 2 1 3 27 27 H 1.48508 * 109.99767 * 299.99691 * 3 2 1 28 28 H 1.48491 * 110.00229 * 61.31748 * 3 2 1 29 29 H 1.08002 * 120.06931 * 180.02562 * 7 5 4 30 30 H 0.96997 * 119.99943 * 359.97438 * 11 9 8 31 31 H 1.09000 * 109.47065 * 300.00129 * 14 12 11 32 32 H 1.09000 * 109.47240 * 59.99697 * 14 12 11 33 33 H 1.09000 * 109.47345 * 59.99617 * 15 14 12 34 34 H 1.09001 * 109.47441 * 179.97438 * 15 14 12 35 35 H 1.08997 * 109.47370 * 294.99803 * 18 16 15 36 36 H 1.09006 * 109.47214 * 55.00345 * 18 16 15 37 37 H 0.96698 * 113.99923 * 179.97438 * 19 18 16 38 38 H 1.09006 * 109.46662 * 60.00088 * 20 16 15 39 39 H 1.09000 * 109.47048 * 179.97438 * 20 16 15 40 40 H 1.08992 * 109.47419 * 300.00529 * 21 12 11 41 41 H 1.09000 * 109.47138 * 60.01076 * 21 12 11 42 42 H 1.08002 * 119.92879 * 0.02562 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 1.8679 -2.0931 1.3029 6 9 1.3559 -2.7991 0.2711 7 6 2.3259 -2.7509 2.4277 8 6 2.8542 -2.0199 3.4933 9 6 3.3454 -2.7165 4.6996 10 8 3.8045 -2.0771 5.6261 11 7 3.2846 -4.0609 4.7732 12 6 3.7713 -4.7516 5.9699 13 1 3.5601 -4.1452 6.8506 14 6 3.0664 -6.1033 6.1006 15 6 3.5741 -6.8246 7.3507 16 6 5.0836 -7.0457 7.2342 17 1 5.2950 -7.6524 6.3536 18 6 5.5914 -7.7664 8.4846 19 8 6.9773 -8.0765 8.3258 20 6 5.7885 -5.6941 7.1035 21 6 5.2806 -4.9728 5.8528 22 6 2.9153 -0.6251 3.4138 23 9 3.4245 0.0902 4.4407 24 6 2.4487 0.0205 2.2836 25 1 -0.3933 0.4417 0.7650 26 1 1.7924 -0.5139 -0.8899 27 1 1.5613 2.4679 -1.2086 28 1 1.5878 2.4586 1.2241 29 1 2.2761 -3.8284 2.4823 30 1 2.9180 -4.5709 4.0341 31 1 1.9911 -5.9458 6.1840 32 1 3.2775 -6.7098 5.2198 33 1 3.3627 -6.2180 8.2313 34 1 3.0716 -7.7874 7.4441 35 1 5.4607 -7.1218 9.3538 36 1 5.0269 -8.6879 8.6274 37 1 7.3670 -8.5351 9.0827 38 1 5.5769 -5.0874 7.9841 39 1 6.8639 -5.8516 7.0210 40 1 5.4917 -5.5793 4.9721 41 1 5.7828 -4.0099 5.7598 42 1 2.4913 1.0979 2.2222 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207542_12360598.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:27 Heat of formation + Delta-G solvation = -185.779476 kcal Electronic energy + Delta-G solvation = -28130.234730 eV Core-core repulsion = 23712.396153 eV Total energy + Delta-G solvation = -4417.838577 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 328.132 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -50.09888 -49.98247 -41.49593 -40.34319 -39.42821 -37.83999 -37.44219 -35.35540 -33.53397 -31.85982 -31.41710 -31.25148 -27.97990 -26.19506 -24.48081 -23.96295 -23.74242 -22.33593 -21.66886 -21.00135 -19.69443 -18.88320 -18.64294 -18.24443 -17.93273 -17.35431 -17.14764 -16.91414 -16.57702 -16.31846 -16.26070 -15.96835 -15.88092 -15.71554 -15.60166 -15.28917 -15.08358 -14.78019 -14.51397 -14.18690 -14.02445 -13.78067 -13.59805 -13.24786 -13.21296 -13.06697 -12.97435 -12.47406 -12.28771 -12.21242 -11.96292 -11.67887 -11.50689 -11.34825 -11.04321 -10.89540 -10.84576 -10.64100 -10.15040 -9.82464 -5.12419 -0.83489 -0.36062 1.02086 1.39373 1.43157 1.79570 1.85328 2.26760 2.75693 2.80334 3.02784 3.11388 3.15075 3.34357 3.45346 3.55100 3.67485 3.71874 3.87877 3.91587 4.05943 4.17949 4.26085 4.28102 4.30269 4.36032 4.40068 4.46194 4.47093 4.53948 4.56758 4.61833 4.68688 4.73385 4.86517 4.94648 5.01780 5.07622 5.22237 5.30157 5.34908 5.37437 5.45194 6.17827 6.29070 6.65766 7.03162 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.520 6.520 2 C -0.079 4.079 3 Si 0.696 3.304 4 C -0.098 4.098 5 C 0.111 3.889 6 F -0.121 7.121 7 C -0.094 4.094 8 C -0.140 4.140 9 C 0.560 3.440 10 O -0.513 6.513 11 N -0.720 5.720 12 C 0.145 3.855 13 H 0.092 0.908 14 C -0.125 4.125 15 C -0.110 4.110 16 C -0.090 4.090 17 H 0.079 0.921 18 C 0.078 3.922 19 O -0.573 6.573 20 C -0.108 4.108 21 C -0.130 4.130 22 C 0.159 3.841 23 F -0.104 7.104 24 C -0.140 4.140 25 H 0.378 0.622 26 H 0.127 0.873 27 H -0.249 1.249 28 H -0.254 1.254 29 H 0.151 0.849 30 H 0.399 0.601 31 H 0.073 0.927 32 H 0.071 0.929 33 H 0.069 0.931 34 H 0.072 0.928 35 H 0.046 0.954 36 H 0.046 0.954 37 H 0.381 0.619 38 H 0.063 0.937 39 H 0.075 0.925 40 H 0.065 0.935 41 H 0.070 0.930 42 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.011 -2.876 -0.182 2.882 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.326 6.326 2 C -0.189 4.189 3 Si 0.596 3.404 4 C -0.100 4.100 5 C 0.091 3.909 6 F -0.099 7.099 7 C -0.113 4.113 8 C -0.144 4.144 9 C 0.346 3.654 10 O -0.388 6.388 11 N -0.372 5.372 12 C 0.041 3.959 13 H 0.110 0.890 14 C -0.163 4.163 15 C -0.148 4.148 16 C -0.108 4.108 17 H 0.098 0.902 18 C 0.001 3.999 19 O -0.379 6.379 20 C -0.146 4.146 21 C -0.168 4.168 22 C 0.139 3.861 23 F -0.082 7.082 24 C -0.158 4.158 25 H 0.226 0.774 26 H 0.145 0.855 27 H -0.173 1.173 28 H -0.179 1.179 29 H 0.169 0.831 30 H 0.235 0.765 31 H 0.092 0.908 32 H 0.090 0.910 33 H 0.088 0.912 34 H 0.090 0.910 35 H 0.065 0.935 36 H 0.064 0.936 37 H 0.228 0.772 38 H 0.082 0.918 39 H 0.093 0.907 40 H 0.084 0.916 41 H 0.089 0.911 42 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges 0.113 -1.594 -0.623 1.716 hybrid contribution -1.213 -0.861 0.691 1.640 sum -1.101 -2.455 0.067 2.692 Atomic orbital electron populations 1.86687 1.16707 1.79942 1.49260 1.25109 0.84674 1.11771 0.97322 0.94721 0.91344 0.73417 0.80884 1.20416 0.99484 0.92617 0.97435 1.17217 0.98903 0.88843 0.85888 1.91586 1.84201 1.78016 1.56086 1.21185 0.97712 1.01106 0.91328 1.19908 1.05452 0.92562 0.96523 1.17828 0.79000 0.82429 0.86176 1.90892 1.44248 1.65775 1.37895 1.45970 1.64275 1.06095 1.20871 1.21108 0.93819 0.93017 0.87943 0.88961 1.21787 1.00275 0.94994 0.99259 1.21458 0.94583 1.00869 0.97875 1.21204 0.94485 0.96961 0.98193 0.90241 1.22225 0.82159 0.98068 0.97479 1.86471 1.24250 1.81030 1.46145 1.21491 1.00769 0.94731 0.97569 1.21945 0.94773 1.01300 0.98821 1.17492 0.95233 0.87975 0.85437 1.91657 1.83380 1.77103 1.56092 1.21076 1.00959 1.01794 0.91982 0.77410 0.85496 1.17300 1.17892 0.83101 0.76521 0.90845 0.91030 0.91218 0.90970 0.93538 0.93618 0.77243 0.91780 0.90668 0.91592 0.91133 0.82448 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.10 12.88 -35.23 -0.45 -0.55 16 2 C -0.08 0.11 2.44 36.00 0.09 0.20 16 3 Si 0.70 -1.61 30.24 -169.99 -5.14 -6.75 16 4 C -0.10 0.10 5.27 -104.49 -0.55 -0.45 16 5 C 0.11 -0.06 7.23 -39.49 -0.29 -0.34 16 6 F -0.12 -0.11 16.73 2.25 0.04 -0.07 16 7 C -0.09 0.15 9.51 -39.12 -0.37 -0.23 16 8 C -0.14 -0.07 5.88 -104.92 -0.62 -0.69 16 9 C 0.56 1.13 7.73 -12.40 -0.10 1.04 16 10 O -0.51 -3.06 15.00 5.30 0.08 -2.98 16 11 N -0.72 0.65 5.03 -54.80 -0.28 0.38 16 12 C 0.14 -0.08 2.45 -67.93 -0.17 -0.25 16 13 H 0.09 0.12 7.58 -51.93 -0.39 -0.27 16 14 C -0.13 0.31 5.39 -26.73 -0.14 0.17 16 15 C -0.11 0.25 5.20 -26.73 -0.14 0.11 16 16 C -0.09 0.08 2.43 -90.62 -0.22 -0.14 16 17 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 18 C 0.08 -0.08 6.43 37.16 0.24 0.16 16 19 O -0.57 -0.25 13.19 -35.23 -0.46 -0.71 16 20 C -0.11 -0.01 5.10 -26.71 -0.14 -0.15 16 21 C -0.13 -0.01 5.50 -26.71 -0.15 -0.16 16 22 C 0.16 0.19 7.28 -38.97 -0.28 -0.10 16 23 F -0.10 -0.39 15.55 2.25 0.04 -0.35 16 24 C -0.14 0.14 8.62 -39.57 -0.34 -0.20 16 25 H 0.38 -1.13 8.70 45.56 0.40 -0.73 16 26 H 0.13 -0.23 7.89 -51.93 -0.41 -0.64 16 27 H -0.25 -0.24 7.11 56.52 0.40 0.16 16 28 H -0.25 0.22 6.67 56.52 0.38 0.59 16 29 H 0.15 -0.65 6.40 -52.49 -0.34 -0.99 16 30 H 0.40 -1.47 6.63 -40.82 -0.27 -1.74 16 31 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 32 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 33 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 34 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 35 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 36 H 0.05 -0.09 8.14 -51.93 -0.42 -0.51 16 37 H 0.38 -1.36 9.12 45.56 0.42 -0.94 16 38 H 0.06 0.03 8.14 -51.93 -0.42 -0.39 16 39 H 0.07 0.11 7.82 -51.93 -0.41 -0.30 16 40 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 41 H 0.07 0.15 8.14 -51.93 -0.42 -0.28 16 42 H 0.16 -0.38 4.83 -52.49 -0.25 -0.64 16 LS Contribution 349.27 15.07 5.26 5.26 Total: 0.00 -8.52 349.27 -8.80 -17.32 By element: Atomic # 1 Polarization: -5.82 SS G_CDS: -4.71 Total: -10.53 kcal Atomic # 6 Polarization: 2.15 SS G_CDS: -3.17 Total: -1.02 kcal Atomic # 7 Polarization: 0.65 SS G_CDS: -0.28 Total: 0.38 kcal Atomic # 8 Polarization: -3.40 SS G_CDS: -0.84 Total: -4.24 kcal Atomic # 9 Polarization: -0.49 SS G_CDS: 0.07 Total: -0.42 kcal Atomic # 14 Polarization: -1.61 SS G_CDS: -5.14 Total: -6.75 kcal Total LS contribution 5.26 Total: 5.26 kcal Total: -8.52 -8.80 -17.32 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207542_12360598.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -168.457 kcal (2) G-P(sol) polarization free energy of solvation -8.523 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -176.980 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.799 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.322 kcal (6) G-S(sol) free energy of system = (1) + (5) -185.779 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds