Wall clock time and date at job start Tue Mar 9 2021 12:54:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86306 * 109.46799 * 2 1 4 4 C 1.50703 * 109.47200 * 119.99699 * 2 1 3 5 5 C 1.34833 * 125.65105 * 65.32614 * 4 2 1 6 6 C 1.40795 * 107.04981 * 180.13580 * 5 4 2 7 7 C 1.36109 * 106.73337 * 359.56997 * 6 5 4 8 8 C 1.47569 * 125.94728 * 180.26566 * 7 6 5 9 9 C 1.39919 * 119.95145 * 359.72585 * 8 7 6 10 10 C 1.36433 * 120.27573 * 179.71740 * 9 8 7 11 11 C 1.39880 * 120.18186 * 0.55763 * 10 9 8 12 12 C 1.47296 * 120.04121 * 179.69704 * 11 10 9 13 13 O 1.21620 * 119.99718 * 180.02562 * 12 11 10 14 14 N 1.34771 * 120.00375 * 0.02562 * 12 11 10 15 15 C 1.46502 * 120.00522 * 180.02562 * 14 12 11 16 16 H 1.09010 * 109.46652 * 325.00341 * 15 14 12 17 17 C 1.52996 * 109.47230 * 85.00005 * 15 14 12 18 18 C 1.52996 * 109.47167 * 180.02562 * 17 15 14 19 19 C 1.52999 * 109.47040 * 299.99635 * 18 17 15 20 20 H 1.08992 * 109.47677 * 300.00135 * 19 18 17 21 21 C 1.53006 * 109.46939 * 179.97438 * 19 18 17 22 22 O 1.42894 * 109.47046 * 65.00187 * 21 19 18 23 23 C 1.53005 * 109.46879 * 60.00301 * 19 18 17 24 24 C 1.52994 * 109.47331 * 205.00405 * 15 14 12 25 25 C 1.40397 * 119.91115 * 359.72127 * 11 10 9 26 26 O 1.35679 * 120.14056 * 179.97438 * 25 11 10 27 27 C 1.38279 * 119.72393 * 359.97438 * 25 11 10 28 28 O 1.34236 * 125.65151 * 244.97919 * 4 2 1 29 29 H 0.96706 * 114.00179 * 299.99661 * 1 2 3 30 30 H 1.08993 * 109.47236 * 240.00444 * 2 1 3 31 31 H 1.48500 * 110.00116 * 300.00122 * 3 2 1 32 32 H 1.48498 * 110.00076 * 61.31870 * 3 2 1 33 33 H 1.07995 * 126.47650 * 359.97438 * 5 4 2 34 34 H 1.08002 * 126.63743 * 179.83926 * 6 5 4 35 35 H 1.08005 * 119.86467 * 0.02562 * 9 8 7 36 36 H 1.07995 * 119.90845 * 180.27889 * 10 9 8 37 37 H 0.97010 * 119.99953 * 0.02562 * 14 12 11 38 38 H 1.09004 * 109.46935 * 300.00553 * 17 15 14 39 39 H 1.09003 * 109.47135 * 60.00155 * 17 15 14 40 40 H 1.09005 * 109.46934 * 179.97438 * 18 17 15 41 41 H 1.08998 * 109.47428 * 60.00285 * 18 17 15 42 42 H 1.08994 * 109.46951 * 185.00413 * 21 19 18 43 43 H 1.09006 * 109.46912 * 305.00182 * 21 19 18 44 44 H 0.96703 * 114.00314 * 179.97438 * 22 21 19 45 45 H 1.08995 * 109.47155 * 179.97438 * 23 19 18 46 46 H 1.09010 * 109.47120 * 59.99560 * 23 19 18 47 47 H 1.08998 * 109.47137 * 300.00024 * 24 15 14 48 48 H 1.09005 * 109.47631 * 59.99714 * 24 15 14 49 49 H 0.96700 * 113.99352 * 270.02073 * 26 25 11 50 50 H 1.08003 * 120.09519 * 180.02562 * 27 25 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.7621 -2.0192 1.5065 6 6 2.3810 -2.2629 2.7475 7 6 2.9084 -1.0784 3.1616 8 6 3.6580 -0.8542 4.4128 9 6 3.8741 -1.9164 5.2976 10 6 4.5711 -1.7178 6.4535 11 6 5.0648 -0.4472 6.7675 12 6 5.8113 -0.2349 8.0195 13 8 6.2397 0.8702 8.2919 14 7 6.0194 -1.2651 8.8630 15 6 6.7613 -1.0538 10.1085 16 1 7.5451 -0.3145 9.9435 17 6 5.8057 -0.5507 11.1923 18 6 6.5806 -0.3295 12.4928 19 6 7.2112 -1.6493 12.9416 20 1 6.4276 -2.3887 13.1068 21 6 7.9866 -1.4278 14.2418 22 8 7.0769 -1.0699 15.2839 23 6 8.1668 -2.1524 11.8577 24 6 7.3915 -2.3738 10.5570 25 6 4.8475 0.6254 5.8881 26 8 5.3239 1.8598 6.1883 27 6 4.1460 0.4185 4.7146 28 8 2.6271 -0.1462 2.2303 29 1 -0.3934 0.4417 0.7651 30 1 1.7923 -0.5137 -0.8900 31 1 1.5614 2.4680 -1.2085 32 1 1.5878 2.4586 1.2242 33 1 1.2468 -2.7433 0.8930 34 1 2.4316 -3.2078 3.2679 35 1 3.4918 -2.8987 5.0622 36 1 4.7383 -2.5428 7.1300 37 1 5.6779 -2.1467 8.6455 38 1 5.3567 0.3897 10.8727 39 1 5.0218 -1.2900 11.3572 40 1 5.8999 0.0294 13.2648 41 1 7.3642 0.4100 12.3276 42 1 8.5086 -2.3451 14.5142 43 1 8.7112 -0.6258 14.1006 44 1 7.5001 -0.9144 16.1394 45 1 8.6164 -3.0924 12.1776 46 1 8.9505 -1.4129 11.6925 47 1 6.6077 -3.1131 10.7219 48 1 8.0723 -2.7323 9.7849 49 1 4.7071 2.4071 6.6934 50 1 3.9757 1.2392 4.0335 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207542_12807986.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:48 Heat of formation + Delta-G solvation = -122.015670 kcal Electronic energy + Delta-G solvation = -33221.221199 eV Core-core repulsion = 28567.475155 eV Total energy + Delta-G solvation = -4653.746044 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.165 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -43.75726 -41.61342 -40.38451 -39.15322 -38.21250 -37.85077 -37.37379 -35.19378 -34.26172 -33.52722 -31.82945 -31.54878 -31.17279 -30.28590 -27.24426 -26.10803 -24.40718 -24.09610 -23.81545 -22.64501 -22.20213 -21.73443 -21.29677 -20.90679 -19.73195 -18.83259 -18.57058 -18.18279 -17.71347 -17.53058 -17.41944 -16.63113 -16.52045 -16.36037 -16.01490 -15.93778 -15.80935 -15.77220 -15.34169 -14.97419 -14.90943 -14.55897 -14.40993 -14.27598 -14.03427 -13.95971 -13.79341 -13.66653 -13.59659 -13.41818 -13.18410 -13.02551 -12.96483 -12.75114 -12.26904 -12.18101 -12.07280 -11.82939 -11.61977 -11.46742 -11.29283 -11.15106 -10.89174 -10.85618 -10.69983 -10.63520 -10.03129 -9.96132 -9.03532 -5.00973 -0.79239 0.09908 0.64286 1.08578 1.41804 1.43450 1.68188 1.89553 1.99705 2.08057 2.64083 3.00585 3.12219 3.17005 3.32244 3.51129 3.55425 3.65253 3.75536 3.82698 3.87582 3.91630 3.94535 3.95930 4.15188 4.21696 4.29022 4.31642 4.36311 4.40326 4.43417 4.49765 4.54179 4.55993 4.59929 4.65424 4.75101 4.76981 4.81434 4.89956 4.98041 4.99121 5.04729 5.07784 5.11319 5.16786 5.25270 5.36101 5.36665 5.42443 5.44588 5.53371 5.92805 6.19739 6.48338 6.66611 6.68290 7.25467 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.520 6.520 2 C -0.034 4.034 3 Si 0.698 3.302 4 C -0.044 4.044 5 C -0.173 4.173 6 C -0.178 4.178 7 C 0.024 3.976 8 C 0.029 3.971 9 C -0.116 4.116 10 C -0.065 4.065 11 C -0.165 4.165 12 C 0.559 3.441 13 O -0.517 6.517 14 N -0.726 5.726 15 C 0.146 3.854 16 H 0.090 0.910 17 C -0.129 4.129 18 C -0.107 4.107 19 C -0.090 4.090 20 H 0.079 0.921 21 C 0.078 3.922 22 O -0.574 6.574 23 C -0.110 4.110 24 C -0.125 4.125 25 C 0.178 3.822 26 O -0.474 6.474 27 C -0.141 4.141 28 O -0.162 6.162 29 H 0.381 0.619 30 H 0.138 0.862 31 H -0.247 1.247 32 H -0.255 1.255 33 H 0.156 0.844 34 H 0.156 0.844 35 H 0.139 0.861 36 H 0.136 0.864 37 H 0.398 0.602 38 H 0.068 0.932 39 H 0.064 0.936 40 H 0.073 0.927 41 H 0.063 0.937 42 H 0.045 0.955 43 H 0.046 0.954 44 H 0.380 0.620 45 H 0.071 0.929 46 H 0.069 0.931 47 H 0.070 0.930 48 H 0.072 0.928 49 H 0.399 0.601 50 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.924 -4.621 1.277 4.882 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.327 6.327 2 C -0.144 4.144 3 Si 0.597 3.403 4 C -0.094 4.094 5 C -0.192 4.192 6 C -0.197 4.197 7 C -0.026 4.026 8 C 0.029 3.971 9 C -0.134 4.134 10 C -0.083 4.083 11 C -0.168 4.168 12 C 0.346 3.654 13 O -0.393 6.393 14 N -0.378 5.378 15 C 0.042 3.958 16 H 0.109 0.891 17 C -0.167 4.167 18 C -0.146 4.146 19 C -0.108 4.108 20 H 0.097 0.903 21 C 0.001 3.999 22 O -0.379 6.379 23 C -0.148 4.148 24 C -0.163 4.163 25 C 0.131 3.869 26 O -0.285 6.285 27 C -0.159 4.159 28 O -0.059 6.059 29 H 0.229 0.771 30 H 0.156 0.844 31 H -0.172 1.172 32 H -0.179 1.179 33 H 0.173 0.827 34 H 0.174 0.826 35 H 0.156 0.844 36 H 0.154 0.846 37 H 0.233 0.767 38 H 0.087 0.913 39 H 0.083 0.917 40 H 0.092 0.908 41 H 0.082 0.918 42 H 0.064 0.936 43 H 0.065 0.935 44 H 0.227 0.773 45 H 0.090 0.910 46 H 0.088 0.912 47 H 0.089 0.911 48 H 0.091 0.909 49 H 0.257 0.743 50 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges 1.265 -3.207 0.158 3.451 hybrid contribution -1.240 -0.777 1.113 1.839 sum 0.025 -3.984 1.271 4.182 Atomic orbital electron populations 1.86668 1.16647 1.80160 1.49240 1.24354 0.84008 1.12200 0.93833 0.94409 0.91489 0.73308 0.81091 1.22939 1.00613 0.93793 0.92078 1.21581 1.04006 0.95638 0.97957 1.21911 1.02062 0.98382 0.97318 1.20331 1.03727 0.87545 0.90985 1.17750 0.95700 0.93702 0.89965 1.20703 1.00218 0.98678 0.93816 1.20820 0.95380 0.95553 0.96570 1.20518 1.04676 0.95065 0.96570 1.17965 0.79799 0.84694 0.82930 1.90844 1.49541 1.23520 1.75376 1.46009 1.57964 1.12149 1.21658 1.21042 0.94179 0.97986 0.82640 0.89145 1.21928 0.98278 1.01887 0.94642 1.21479 0.99930 0.96612 0.96532 1.21201 0.98208 0.98553 0.92853 0.90290 1.22230 0.91430 0.98556 0.87718 1.86470 1.37534 1.92286 1.21620 1.21467 0.97822 1.01822 0.93683 1.21787 1.00148 0.96550 0.97793 1.18284 0.91378 0.85778 0.91417 1.84775 1.44624 1.22729 1.76383 1.21590 0.98721 0.97510 0.98093 1.83952 1.57535 1.37918 1.26481 0.77110 0.84411 1.17159 1.17932 0.82673 0.82619 0.84365 0.84612 0.76715 0.91293 0.91744 0.90787 0.91815 0.93626 0.93542 0.77266 0.91038 0.91239 0.91144 0.90885 0.74286 0.83864 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.21 12.88 -35.23 -0.45 -0.67 16 2 C -0.03 0.02 2.98 36.01 0.11 0.13 16 3 Si 0.70 -0.56 32.11 -169.99 -5.46 -6.01 16 4 C -0.04 -0.02 6.21 -35.51 -0.22 -0.24 16 5 C -0.17 -0.06 10.78 -39.82 -0.43 -0.49 16 6 C -0.18 0.00 10.26 -39.38 -0.40 -0.41 16 7 C 0.02 0.02 7.02 -36.54 -0.26 -0.23 16 8 C 0.03 0.01 5.87 -104.95 -0.62 -0.60 16 9 C -0.12 0.17 9.48 -39.60 -0.38 -0.21 16 10 C -0.06 0.10 9.47 -39.62 -0.38 -0.27 16 11 C -0.16 -0.19 5.89 -104.79 -0.62 -0.81 16 12 C 0.56 1.39 7.72 -12.58 -0.10 1.29 16 13 O -0.52 -3.15 14.80 -16.69 -0.25 -3.40 16 14 N -0.73 0.32 5.03 -54.92 -0.28 0.04 16 15 C 0.15 -0.02 2.45 -67.93 -0.17 -0.19 16 16 H 0.09 0.18 7.58 -51.92 -0.39 -0.21 16 17 C -0.13 -0.05 5.49 -26.74 -0.15 -0.20 16 18 C -0.11 -0.04 5.10 -26.73 -0.14 -0.18 16 19 C -0.09 0.06 2.43 -90.61 -0.22 -0.16 16 20 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 21 C 0.08 -0.06 6.43 37.16 0.24 0.18 16 22 O -0.57 -0.33 13.20 -35.23 -0.46 -0.80 16 23 C -0.11 0.21 5.20 -26.71 -0.14 0.08 16 24 C -0.12 0.27 5.39 -26.71 -0.14 0.12 16 25 C 0.18 0.35 6.71 -38.75 -0.26 0.09 16 26 O -0.47 -1.29 11.56 -40.69 -0.47 -1.76 16 27 C -0.14 -0.15 9.65 -39.06 -0.38 -0.53 16 28 O -0.16 -0.23 8.79 4.70 0.04 -0.19 16 29 H 0.38 -0.86 8.70 45.56 0.40 -0.46 16 30 H 0.14 -0.31 7.96 -51.93 -0.41 -0.72 16 31 H -0.25 -0.41 7.11 56.52 0.40 -0.01 16 32 H -0.26 -0.47 7.11 56.52 0.40 -0.06 16 33 H 0.16 -0.13 8.06 -52.49 -0.42 -0.55 16 34 H 0.16 -0.37 7.24 -52.49 -0.38 -0.75 16 35 H 0.14 -0.52 6.95 -52.48 -0.36 -0.88 16 36 H 0.14 -0.63 6.37 -52.49 -0.33 -0.97 16 37 H 0.40 -1.27 6.61 -40.82 -0.27 -1.54 16 38 H 0.07 0.16 8.14 -51.93 -0.42 -0.27 16 39 H 0.06 0.00 8.14 -51.93 -0.42 -0.43 16 40 H 0.07 0.12 7.82 -51.93 -0.41 -0.29 16 41 H 0.06 0.05 8.14 -51.93 -0.42 -0.38 16 42 H 0.05 -0.08 8.14 -51.93 -0.42 -0.50 16 43 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 44 H 0.38 -1.30 9.12 45.56 0.42 -0.89 16 45 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 46 H 0.07 -0.12 8.14 -51.92 -0.42 -0.54 16 47 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 48 H 0.07 -0.17 8.14 -51.93 -0.42 -0.60 16 49 H 0.40 -0.38 9.06 45.56 0.41 0.04 16 50 H 0.14 0.07 7.90 -52.48 -0.41 -0.35 16 LS Contribution 411.90 15.07 6.21 6.21 Total: 0.00 -10.35 411.90 -11.36 -21.71 By element: Atomic # 1 Polarization: -6.90 SS G_CDS: -5.60 Total: -12.50 kcal Atomic # 6 Polarization: 2.01 SS G_CDS: -4.64 Total: -2.63 kcal Atomic # 7 Polarization: 0.32 SS G_CDS: -0.28 Total: 0.04 kcal Atomic # 8 Polarization: -5.21 SS G_CDS: -1.59 Total: -6.81 kcal Atomic # 14 Polarization: -0.56 SS G_CDS: -5.46 Total: -6.01 kcal Total LS contribution 6.21 Total: 6.21 kcal Total: -10.35 -11.36 -21.71 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207542_12807986.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -100.310 kcal (2) G-P(sol) polarization free energy of solvation -10.349 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -110.659 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.357 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.706 kcal (6) G-S(sol) free energy of system = (1) + (5) -122.016 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds