Wall clock time and date at job start Tue Mar 9 2021 12:54:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86305 * 109.46774 * 2 1 4 4 C 1.50692 * 109.47047 * 119.99916 * 2 1 3 5 5 C 1.38333 * 119.87336 * 65.00707 * 4 2 1 6 6 C 1.37997 * 120.13167 * 180.02562 * 5 4 2 7 7 C 1.39403 * 119.86759 * 359.97438 * 6 5 4 8 8 C 1.48278 * 120.12636 * 180.02562 * 7 6 5 9 9 C 1.39505 * 119.97849 * 179.97438 * 8 7 6 10 10 C 1.37667 * 120.02546 * 180.02562 * 9 8 7 11 11 C 1.39704 * 119.97648 * 359.97438 * 10 9 8 12 12 C 1.47715 * 120.02461 * 180.02562 * 11 10 9 13 13 O 1.21575 * 120.00205 * 0.02562 * 12 11 10 14 14 N 1.34775 * 120.00323 * 180.02562 * 12 11 10 15 15 C 1.46500 * 120.00366 * 179.97438 * 14 12 11 16 16 H 1.09000 * 109.47175 * 34.99887 * 15 14 12 17 17 C 1.53006 * 109.46998 * 154.99756 * 15 14 12 18 18 C 1.52999 * 109.46626 * 179.97438 * 17 15 14 19 19 C 1.52997 * 109.47592 * 300.00035 * 18 17 15 20 20 H 1.09000 * 109.47140 * 300.00346 * 19 18 17 21 21 C 1.53002 * 109.47092 * 180.02562 * 19 18 17 22 22 O 1.42900 * 109.47073 * 65.00407 * 21 19 18 23 23 C 1.52996 * 109.47165 * 60.00300 * 19 18 17 24 24 C 1.52997 * 109.47204 * 274.99782 * 15 14 12 25 25 C 1.39708 * 119.95300 * 0.27912 * 11 10 9 26 26 C 1.37674 * 119.97171 * 359.42305 * 25 11 10 27 27 C 1.39401 * 119.75163 * 0.27292 * 7 6 5 28 28 C 1.38007 * 119.86570 * 359.44827 * 27 7 6 29 29 H 0.96693 * 114.00681 * 299.99645 * 1 2 3 30 30 H 1.09003 * 109.47414 * 240.00387 * 2 1 3 31 31 H 1.48497 * 109.99790 * 178.68134 * 3 2 1 32 32 H 1.48501 * 110.00000 * 300.00073 * 3 2 1 33 33 H 1.08002 * 119.93256 * 359.97438 * 5 4 2 34 34 H 1.07994 * 120.06865 * 179.97438 * 6 5 4 35 35 H 1.07998 * 119.98736 * 359.97438 * 9 8 7 36 36 H 1.08003 * 120.01046 * 179.97438 * 10 9 8 37 37 H 0.97001 * 119.99752 * 359.97438 * 14 12 11 38 38 H 1.08993 * 109.46955 * 300.00226 * 17 15 14 39 39 H 1.09000 * 109.47050 * 60.00054 * 17 15 14 40 40 H 1.09000 * 109.47160 * 60.00369 * 18 17 15 41 41 H 1.09002 * 109.46719 * 180.02562 * 18 17 15 42 42 H 1.09005 * 109.46847 * 185.00127 * 21 19 18 43 43 H 1.08999 * 109.47369 * 304.99894 * 21 19 18 44 44 H 0.96700 * 113.99971 * 180.02562 * 22 21 19 45 45 H 1.08992 * 109.47534 * 180.02562 * 23 19 18 46 46 H 1.08996 * 109.47134 * 59.99508 * 23 19 18 47 47 H 1.09000 * 109.47140 * 300.00127 * 24 15 14 48 48 H 1.09001 * 109.47230 * 59.99271 * 24 15 14 49 49 H 1.07997 * 120.01726 * 179.72256 * 25 11 10 50 50 H 1.07998 * 119.98782 * 180.30090 * 26 25 11 51 51 H 1.07994 * 120.07074 * 179.70804 * 27 7 6 52 52 H 1.08000 * 119.93519 * 180.27296 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 1.6831 -2.0612 1.3957 6 6 2.1401 -2.7169 2.5206 7 6 2.8537 -2.0154 3.4913 8 6 3.3479 -2.7143 4.7020 9 6 4.0621 -2.0094 5.6711 10 6 4.5219 -2.6575 6.7953 11 6 4.2726 -4.0215 6.9657 12 6 4.7649 -4.7179 8.1718 13 8 5.3870 -4.1039 9.0169 14 7 4.5246 -6.0339 8.3355 15 6 5.0134 -6.7246 9.5314 16 1 4.9666 -6.0493 10.3857 17 6 4.1417 -7.9523 9.8034 18 6 4.6526 -8.6739 11.0520 19 6 6.1003 -9.1157 10.8292 20 1 6.1468 -9.7909 9.9748 21 6 6.6110 -9.8380 12.0777 22 8 5.8716 -11.0464 12.2648 23 6 6.9721 -7.8882 10.5573 24 6 6.4613 -7.1664 9.3092 25 6 3.5618 -4.7277 5.9920 26 6 3.0977 -4.0763 4.8715 27 6 3.0963 -0.6531 3.3219 28 6 2.6393 -0.0092 2.1900 29 1 -0.3934 0.4416 0.7650 30 1 1.7924 -0.5138 -0.8900 31 1 3.5345 1.7704 0.0321 32 1 1.5613 2.4679 -1.2085 33 1 1.1299 -2.6035 0.6432 34 1 1.9455 -3.7714 2.6488 35 1 4.2551 -0.9551 5.5390 36 1 5.0751 -2.1116 7.5452 37 1 4.0280 -6.5237 7.6614 38 1 3.1102 -7.6376 9.9616 39 1 4.1885 -8.6276 8.9491 40 1 4.6061 -7.9988 11.9064 41 1 4.0318 -9.5488 11.2455 42 1 7.6679 -10.0742 11.9540 43 1 6.4819 -9.1946 12.9480 44 1 6.1421 -11.5570 13.0402 45 1 8.0034 -8.2029 10.3982 46 1 6.9255 -7.2130 11.4117 47 1 6.5081 -7.8417 8.4549 48 1 7.0823 -6.2918 9.1153 49 1 3.3724 -5.7831 6.1206 50 1 2.5440 -4.6209 4.1210 51 1 3.6444 -0.1037 4.0728 52 1 2.8305 1.0452 2.0556 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207542_13158362.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:56 Heat of formation + Delta-G solvation = -78.624745 kcal Electronic energy + Delta-G solvation = -31456.146510 eV Core-core repulsion = 27157.882662 eV Total energy + Delta-G solvation = -4298.263847 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.182 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -41.52640 -40.87340 -39.91525 -39.02923 -37.59476 -37.38815 -35.27120 -34.06485 -32.70598 -31.90717 -31.74959 -31.49102 -30.44144 -27.21144 -26.14000 -24.73334 -24.35005 -23.80839 -22.71867 -22.52266 -21.91437 -21.30389 -20.83757 -19.26438 -18.48042 -18.24067 -17.77698 -17.42483 -16.91899 -16.38984 -16.37327 -16.06841 -15.98144 -15.88930 -15.64502 -15.49058 -15.15912 -15.02465 -14.98416 -14.88523 -14.72442 -14.34351 -14.25046 -14.09232 -13.98756 -13.59913 -13.46454 -13.24335 -13.17891 -13.00661 -12.79612 -12.58744 -12.27072 -12.17087 -12.04605 -12.00731 -11.67907 -11.64953 -11.48340 -11.28790 -10.89065 -10.84441 -10.77814 -10.45791 -10.11431 -10.05081 -10.04318 -9.11807 -5.08010 -0.70908 0.28782 0.31992 0.48702 1.24136 1.59371 1.87058 1.93714 2.09551 2.58926 2.97613 3.18623 3.33639 3.43889 3.51745 3.58808 3.61902 3.66719 3.75795 3.80475 3.89538 3.91308 3.95275 4.04513 4.17936 4.20158 4.22335 4.27641 4.31214 4.35919 4.43058 4.45178 4.47147 4.54852 4.57245 4.62359 4.64315 4.77916 4.79682 4.84644 4.90235 4.97482 5.02500 5.07539 5.10201 5.10958 5.13656 5.16729 5.23732 5.34390 5.36709 5.40716 5.41843 5.50777 5.58621 5.75017 5.84070 6.47866 6.51311 6.65681 7.22012 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.069 4.069 3 Si 0.685 3.315 4 C -0.114 4.114 5 C -0.090 4.090 6 C -0.105 4.105 7 C -0.049 4.049 8 C -0.018 4.018 9 C -0.118 4.118 10 C -0.054 4.054 11 C -0.136 4.136 12 C 0.559 3.441 13 O -0.534 6.534 14 N -0.724 5.724 15 C 0.145 3.855 16 H 0.091 0.909 17 C -0.127 4.127 18 C -0.106 4.106 19 C -0.090 4.090 20 H 0.079 0.921 21 C 0.078 3.922 22 O -0.574 6.574 23 C -0.111 4.111 24 C -0.127 4.127 25 C -0.082 4.082 26 C -0.118 4.118 27 C -0.100 4.100 28 C -0.113 4.113 29 H 0.379 0.621 30 H 0.114 0.886 31 H -0.257 1.257 32 H -0.254 1.254 33 H 0.129 0.871 34 H 0.129 0.871 35 H 0.135 0.865 36 H 0.140 0.860 37 H 0.399 0.601 38 H 0.071 0.929 39 H 0.069 0.931 40 H 0.064 0.936 41 H 0.076 0.924 42 H 0.046 0.954 43 H 0.046 0.954 44 H 0.380 0.620 45 H 0.068 0.932 46 H 0.068 0.932 47 H 0.065 0.935 48 H 0.071 0.929 49 H 0.128 0.872 50 H 0.133 0.867 51 H 0.132 0.868 52 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.979 -1.078 1.030 1.784 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.180 4.180 3 Si 0.587 3.413 4 C -0.115 4.115 5 C -0.108 4.108 6 C -0.123 4.123 7 C -0.049 4.049 8 C -0.018 4.018 9 C -0.136 4.136 10 C -0.073 4.073 11 C -0.139 4.139 12 C 0.347 3.653 13 O -0.411 6.411 14 N -0.375 5.375 15 C 0.041 3.959 16 H 0.109 0.891 17 C -0.165 4.165 18 C -0.144 4.144 19 C -0.108 4.108 20 H 0.097 0.903 21 C 0.001 3.999 22 O -0.380 6.380 23 C -0.149 4.149 24 C -0.166 4.166 25 C -0.101 4.101 26 C -0.136 4.136 27 C -0.118 4.118 28 C -0.131 4.131 29 H 0.227 0.773 30 H 0.131 0.869 31 H -0.182 1.182 32 H -0.179 1.179 33 H 0.147 0.853 34 H 0.147 0.853 35 H 0.152 0.848 36 H 0.158 0.842 37 H 0.235 0.765 38 H 0.089 0.911 39 H 0.087 0.913 40 H 0.083 0.917 41 H 0.095 0.905 42 H 0.064 0.936 43 H 0.065 0.935 44 H 0.227 0.773 45 H 0.087 0.913 46 H 0.087 0.913 47 H 0.084 0.916 48 H 0.089 0.911 49 H 0.146 0.854 50 H 0.151 0.849 51 H 0.150 0.850 52 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -0.254 -0.141 0.125 0.316 hybrid contribution 0.217 -1.127 -0.029 1.148 sum -0.037 -1.268 0.097 1.272 Atomic orbital electron populations 1.86512 1.16975 1.81708 1.49263 1.25074 0.85329 1.10154 0.97468 0.94763 0.81135 0.78025 0.87346 1.20453 0.99190 0.95046 0.96768 1.20973 0.98593 0.93734 0.97539 1.21315 0.97327 1.00127 0.93496 1.18820 0.98749 0.93481 0.93820 1.18989 0.96275 0.93322 0.93245 1.21245 0.98359 1.00480 0.93497 1.21230 0.96217 0.92955 0.96907 1.19994 1.03066 0.95096 0.95756 1.18272 0.79299 0.81764 0.85948 1.90797 1.40364 1.66173 1.43786 1.46016 1.57914 1.09343 1.24230 1.21059 0.93320 0.93634 0.87926 0.89141 1.21829 0.99295 0.96062 0.99324 1.21463 0.95669 1.00319 0.96976 1.21201 0.95522 0.96368 0.97715 0.90286 1.22233 0.94355 0.85875 0.97481 1.86462 1.63378 1.36403 1.51720 1.21467 0.99044 0.96146 0.98234 1.21883 0.95914 1.00601 0.98197 1.21205 0.96057 0.99582 0.93221 1.21164 1.00629 0.93744 0.98072 1.21229 0.99387 0.93608 0.97599 1.20943 0.98675 0.99349 0.94097 0.77320 0.86864 1.18197 1.17883 0.85311 0.85298 0.84755 0.84236 0.76548 0.91052 0.91255 0.91720 0.90502 0.93586 0.93528 0.77260 0.91281 0.91335 0.91600 0.91059 0.85418 0.84933 0.85010 0.85264 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.03 12.83 -35.23 -0.45 -0.43 16 2 C -0.07 0.04 2.80 36.00 0.10 0.14 16 3 Si 0.69 -0.87 29.79 -169.99 -5.06 -5.93 16 4 C -0.11 0.03 5.36 -104.55 -0.56 -0.53 16 5 C -0.09 0.00 9.67 -39.63 -0.38 -0.38 16 6 C -0.10 0.04 9.43 -39.24 -0.37 -0.33 16 7 C -0.05 0.00 5.88 -104.90 -0.62 -0.62 16 8 C -0.02 0.00 5.88 -104.82 -0.62 -0.62 16 9 C -0.12 -0.01 9.41 -39.32 -0.37 -0.38 16 10 C -0.05 -0.07 9.58 -39.24 -0.38 -0.44 16 11 C -0.14 -0.17 5.88 -104.93 -0.62 -0.78 16 12 C 0.56 1.46 7.73 -12.39 -0.10 1.36 16 13 O -0.53 -3.30 16.00 5.30 0.08 -3.22 16 14 N -0.72 0.08 5.03 -54.79 -0.28 -0.20 16 15 C 0.14 0.01 2.46 -67.93 -0.17 -0.15 16 16 H 0.09 0.18 7.58 -51.93 -0.39 -0.21 16 17 C -0.13 0.16 5.39 -26.73 -0.14 0.02 16 18 C -0.11 0.06 5.10 -26.73 -0.14 -0.08 16 19 C -0.09 0.05 2.43 -90.62 -0.22 -0.17 16 20 H 0.08 0.02 8.14 -51.93 -0.42 -0.41 16 21 C 0.08 -0.05 6.43 37.16 0.24 0.18 16 22 O -0.57 -0.22 13.19 -35.23 -0.46 -0.69 16 23 C -0.11 0.08 5.20 -26.76 -0.14 -0.06 16 24 C -0.13 -0.01 5.49 -26.76 -0.15 -0.15 16 25 C -0.08 0.07 9.52 -39.24 -0.37 -0.30 16 26 C -0.12 0.09 9.41 -39.31 -0.37 -0.28 16 27 C -0.10 0.07 9.43 -39.23 -0.37 -0.30 16 28 C -0.11 0.11 8.65 -39.63 -0.34 -0.24 16 29 H 0.38 -1.46 8.70 45.56 0.40 -1.06 16 30 H 0.11 -0.01 7.96 -51.93 -0.41 -0.43 16 31 H -0.26 -0.29 7.11 56.52 0.40 0.11 16 32 H -0.25 -0.53 7.11 56.52 0.40 -0.12 16 33 H 0.13 -0.09 8.06 -52.49 -0.42 -0.51 16 34 H 0.13 -0.28 6.19 -52.49 -0.33 -0.60 16 35 H 0.13 -0.26 6.19 -52.49 -0.32 -0.59 16 36 H 0.14 0.19 7.64 -52.48 -0.40 -0.21 16 37 H 0.40 -1.05 6.62 -40.82 -0.27 -1.32 16 38 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 39 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 40 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 41 H 0.08 0.03 7.82 -51.93 -0.41 -0.38 16 42 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 43 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 44 H 0.38 -1.35 9.12 45.56 0.42 -0.94 16 45 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 46 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 47 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 48 H 0.07 0.13 8.14 -51.93 -0.42 -0.29 16 49 H 0.13 -0.46 6.39 -52.49 -0.34 -0.79 16 50 H 0.13 -0.36 6.19 -52.49 -0.32 -0.69 16 51 H 0.13 -0.33 6.19 -52.49 -0.33 -0.66 16 52 H 0.13 -0.37 4.89 -52.49 -0.26 -0.63 16 LS Contribution 413.11 15.07 6.23 6.23 Total: 0.00 -9.13 413.11 -12.83 -21.97 By element: Atomic # 1 Polarization: -6.81 SS G_CDS: -6.81 Total: -13.62 kcal Atomic # 6 Polarization: 1.96 SS G_CDS: -6.07 Total: -4.11 kcal Atomic # 7 Polarization: 0.08 SS G_CDS: -0.28 Total: -0.20 kcal Atomic # 8 Polarization: -3.50 SS G_CDS: -0.83 Total: -4.33 kcal Atomic # 14 Polarization: -0.87 SS G_CDS: -5.06 Total: -5.93 kcal Total LS contribution 6.23 Total: 6.23 kcal Total: -9.13 -12.83 -21.97 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207542_13158362.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -56.659 kcal (2) G-P(sol) polarization free energy of solvation -9.134 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -65.793 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.832 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.965 kcal (6) G-S(sol) free energy of system = (1) + (5) -78.625 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds