Wall clock time and date at job start Tue Mar 9 2021 12:55:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86297 * 109.47363 * 2 1 4 4 C 1.50705 * 109.46827 * 120.00310 * 2 1 3 5 5 C 1.38577 * 120.32603 * 64.99832 * 4 2 1 6 6 C 1.38633 * 118.48873 * 179.97438 * 5 4 2 7 7 C 1.39268 * 119.05883 * 0.02562 * 6 5 4 8 8 C 1.48168 * 119.72158 * 179.97438 * 7 6 5 9 9 O 1.21515 * 120.00005 * 0.02562 * 8 7 6 10 10 N 1.34780 * 120.00070 * 180.02562 * 8 7 6 11 11 C 1.46492 * 119.99930 * 180.02562 * 10 8 7 12 12 H 1.09002 * 109.47696 * 34.99761 * 11 10 8 13 13 C 1.53002 * 109.47204 * 155.00105 * 11 10 8 14 14 C 1.53000 * 109.47233 * 180.02562 * 13 11 10 15 15 C 1.52997 * 109.47060 * 299.99657 * 14 13 11 16 16 H 1.09002 * 109.47153 * 300.00319 * 15 14 13 17 17 C 1.52992 * 109.47482 * 180.02562 * 15 14 13 18 18 O 1.42900 * 109.47498 * 174.99804 * 17 15 14 19 19 C 1.52999 * 109.47317 * 59.99960 * 15 14 13 20 20 C 1.52997 * 109.47244 * 274.99857 * 11 10 8 21 21 N 1.32743 * 120.55337 * 0.25514 * 7 6 5 22 22 C 1.31496 * 121.64814 * 359.47354 * 21 7 6 23 23 H 0.96704 * 113.99986 * 300.00438 * 1 2 3 24 24 H 1.09000 * 109.46639 * 239.99807 * 2 1 3 25 25 H 1.48494 * 110.00129 * 178.68063 * 3 2 1 26 26 H 1.48496 * 109.99861 * 300.00209 * 3 2 1 27 27 H 1.08004 * 120.75566 * 359.97438 * 5 4 2 28 28 H 1.07998 * 120.46673 * 179.97438 * 6 5 4 29 29 H 0.96998 * 119.99716 * 359.97438 * 10 8 7 30 30 H 1.08992 * 109.47063 * 59.99836 * 13 11 10 31 31 H 1.09004 * 109.46733 * 299.99549 * 13 11 10 32 32 H 1.09002 * 109.47398 * 59.99826 * 14 13 11 33 33 H 1.09001 * 109.47194 * 180.02562 * 14 13 11 34 34 H 1.09001 * 109.47359 * 295.00205 * 17 15 14 35 35 H 1.09002 * 109.46906 * 55.00224 * 17 15 14 36 36 H 0.96702 * 114.00498 * 180.02562 * 18 17 15 37 37 H 1.09000 * 109.47486 * 180.02562 * 19 15 14 38 38 H 1.09002 * 109.46716 * 60.00091 * 19 15 14 39 39 H 1.09002 * 109.47153 * 300.00242 * 20 11 10 40 40 H 1.09001 * 109.47289 * 60.00326 * 20 11 10 41 41 H 1.08001 * 119.55478 * 180.27099 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 1.6878 -2.0634 1.4056 6 6 2.1678 -2.6788 2.5514 7 6 2.8736 -1.9199 3.4817 8 6 3.3927 -2.5625 4.7118 9 8 3.2024 -3.7470 4.9052 10 7 4.0761 -1.8333 5.6161 11 6 4.5898 -2.4688 6.8320 12 1 4.8985 -3.4895 6.6059 13 6 5.7903 -1.6765 7.3534 14 6 6.3272 -2.3405 8.6229 15 6 5.2301 -2.3645 9.6890 16 1 4.9213 -1.3440 9.9155 17 6 5.7671 -3.0280 10.9587 18 8 4.7830 -2.9464 11.9916 19 6 4.0296 -3.1568 9.1677 20 6 3.4924 -2.4923 7.8979 21 7 3.0804 -0.6246 3.2784 22 6 2.6408 -0.0169 2.1983 23 1 -0.3933 0.4418 0.7650 24 1 1.7923 -0.5139 -0.8900 25 1 3.5346 1.7702 0.0321 26 1 1.5615 2.4678 -1.2084 27 1 1.1367 -2.6257 0.6663 28 1 1.9961 -3.7315 2.7205 29 1 4.2283 -0.8879 5.4615 30 1 5.4816 -0.6559 7.5795 31 1 6.5721 -1.6598 6.5940 32 1 6.6361 -3.3611 8.3964 33 1 7.1822 -1.7758 8.9946 34 1 5.9933 -4.0744 10.7541 35 1 6.6744 -2.5163 11.2801 36 1 5.0563 -3.3478 12.8279 37 1 3.2478 -3.1735 9.9270 38 1 4.3384 -4.1773 8.9412 39 1 3.1837 -1.4716 8.1240 40 1 2.6372 -3.0568 7.5265 41 1 2.8320 1.0377 2.0652 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7207542_13287726.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:55:16 Heat of formation + Delta-G solvation = -94.851553 kcal Electronic energy + Delta-G solvation = -23188.789553 eV Core-core repulsion = 19648.375947 eV Total energy + Delta-G solvation = -3540.413606 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 293.146 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -41.95193 -40.77023 -39.49302 -37.88046 -37.44358 -35.35575 -33.82881 -33.01694 -31.80632 -31.29469 -27.94342 -26.09942 -25.03110 -23.95517 -23.68365 -22.31782 -21.67506 -20.93923 -19.27668 -18.60358 -18.15520 -17.86104 -16.98172 -16.71017 -16.64042 -16.23097 -16.07775 -15.85329 -15.75846 -15.20779 -15.14890 -14.55648 -14.47852 -14.35430 -14.33499 -13.96442 -13.59375 -13.50192 -13.17761 -12.98638 -12.55363 -12.29768 -12.18627 -12.13103 -11.69576 -11.46183 -11.40399 -11.22487 -11.07955 -10.82376 -10.68651 -10.57501 -10.36017 -10.08158 -5.00475 -0.62021 0.05799 1.24780 1.51677 1.64507 1.92607 1.97974 2.64480 2.92178 3.31449 3.42276 3.51110 3.59760 3.64924 3.75788 3.78196 3.92754 3.95619 4.01265 4.11299 4.29032 4.33587 4.40007 4.41354 4.48491 4.52122 4.56299 4.60016 4.70905 4.83263 4.84693 4.94759 4.97219 5.06291 5.07934 5.14146 5.20265 5.34294 5.36944 5.40226 5.48829 6.26391 6.59813 6.70992 6.90346 7.03074 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.070 4.070 3 Si 0.775 3.225 4 C -0.143 4.143 5 C -0.054 4.054 6 C -0.117 4.117 7 C 0.064 3.936 8 C 0.568 3.432 9 O -0.567 6.567 10 N -0.696 5.696 11 C 0.144 3.856 12 H 0.072 0.928 13 C -0.118 4.118 14 C -0.106 4.106 15 C -0.088 4.088 16 H 0.074 0.926 17 C 0.076 3.924 18 O -0.596 6.596 19 C -0.103 4.103 20 C -0.123 4.123 21 N -0.459 5.459 22 C 0.104 3.896 23 H 0.397 0.603 24 H 0.119 0.881 25 H -0.279 1.279 26 H -0.296 1.296 27 H 0.160 0.840 28 H 0.147 0.853 29 H 0.419 0.581 30 H 0.083 0.917 31 H 0.080 0.920 32 H 0.068 0.932 33 H 0.087 0.913 34 H 0.050 0.950 35 H 0.059 0.941 36 H 0.395 0.605 37 H 0.060 0.940 38 H 0.058 0.942 39 H 0.071 0.929 40 H 0.045 0.955 41 H 0.190 0.810 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.069 4.441 1.258 5.058 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.359 6.359 2 C -0.180 4.180 3 Si 0.680 3.320 4 C -0.145 4.145 5 C -0.079 4.079 6 C -0.138 4.138 7 C -0.073 4.073 8 C 0.353 3.647 9 O -0.446 6.446 10 N -0.346 5.346 11 C 0.040 3.960 12 H 0.090 0.910 13 C -0.156 4.156 14 C -0.144 4.144 15 C -0.106 4.106 16 H 0.093 0.907 17 C -0.002 4.002 18 O -0.405 6.405 19 C -0.141 4.141 20 C -0.162 4.162 21 N -0.170 5.170 22 C -0.056 4.056 23 H 0.248 0.752 24 H 0.136 0.864 25 H -0.205 1.205 26 H -0.224 1.224 27 H 0.178 0.822 28 H 0.165 0.835 29 H 0.257 0.743 30 H 0.101 0.899 31 H 0.099 0.901 32 H 0.087 0.913 33 H 0.105 0.895 34 H 0.068 0.932 35 H 0.077 0.923 36 H 0.245 0.755 37 H 0.078 0.922 38 H 0.077 0.923 39 H 0.090 0.910 40 H 0.064 0.936 41 H 0.206 0.794 Dipole moment (debyes) X Y Z Total from point charges 2.660 4.625 0.660 5.376 hybrid contribution -0.185 -1.282 -0.534 1.401 sum 2.475 3.343 0.126 4.161 Atomic orbital electron populations 1.86514 1.16673 1.82124 1.50573 1.25184 0.85610 1.11051 0.96173 0.93782 0.78137 0.74503 0.85592 1.21781 0.98776 0.95568 0.98414 1.21736 0.95586 0.94251 0.96377 1.22276 0.95707 1.02258 0.93536 1.21074 0.99623 0.90902 0.95743 1.18133 0.78110 0.85658 0.82789 1.90786 1.59328 1.16429 1.78068 1.45894 1.54280 1.14215 1.20194 1.21111 0.94175 0.97703 0.83022 0.90990 1.21748 0.96059 0.99847 0.97907 1.21448 0.97560 1.01925 0.93424 1.21188 0.95690 1.00049 0.93701 0.90733 1.22301 0.90607 0.99658 0.87596 1.86431 1.45020 1.83661 1.25352 1.21426 0.97927 0.98881 0.95888 1.21862 0.97700 1.01467 0.95141 1.67499 1.18495 1.08919 1.22073 1.23037 0.93571 1.00807 0.88209 0.75226 0.86399 1.20540 1.22377 0.82247 0.83500 0.74286 0.89885 0.90131 0.91283 0.89464 0.93157 0.92266 0.75524 0.92157 0.92308 0.91048 0.93604 0.79383 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 2.01 12.84 -148.98 -1.91 0.10 16 2 C -0.07 0.33 2.82 71.24 0.20 0.53 16 3 Si 0.77 -4.79 29.83 68.60 2.05 -2.74 16 4 C -0.14 0.41 5.37 -19.69 -0.11 0.31 16 5 C -0.05 0.05 9.83 22.45 0.22 0.27 16 6 C -0.12 -0.37 9.63 22.61 0.22 -0.15 16 7 C 0.06 0.31 6.75 41.89 0.28 0.60 16 8 C 0.57 4.52 7.78 86.88 0.68 5.20 16 9 O -0.57 -8.31 15.99 -3.76 -0.06 -8.37 16 10 N -0.70 -1.86 5.07 -445.11 -2.26 -4.12 16 11 C 0.14 0.27 2.45 44.99 0.11 0.38 16 12 H 0.07 0.43 7.58 -2.39 -0.02 0.41 16 13 C -0.12 0.41 5.39 30.60 0.16 0.58 16 14 C -0.11 0.42 5.20 30.59 0.16 0.58 16 15 C -0.09 0.07 2.43 -10.80 -0.03 0.05 16 16 H 0.07 0.03 8.14 -2.39 -0.02 0.01 16 17 C 0.08 -0.12 6.43 71.98 0.46 0.35 16 18 O -0.60 -0.94 13.20 -148.98 -1.97 -2.90 16 19 C -0.10 -0.26 5.10 30.61 0.16 -0.10 16 20 C -0.12 -0.40 5.50 30.61 0.17 -0.23 16 21 N -0.46 -0.77 9.54 -184.91 -1.76 -2.54 16 22 C 0.10 -0.28 9.84 84.83 0.83 0.56 16 23 H 0.40 -4.56 8.70 -74.05 -0.64 -5.21 16 24 H 0.12 -0.50 7.96 -2.39 -0.02 -0.52 16 25 H -0.28 0.45 7.11 99.48 0.71 1.16 16 26 H -0.30 -0.56 7.11 99.48 0.71 0.15 16 27 H 0.16 -0.60 8.06 -2.91 -0.02 -0.63 16 28 H 0.15 0.53 7.64 -2.91 -0.02 0.50 16 29 H 0.42 -0.42 7.93 -92.71 -0.74 -1.15 16 30 H 0.08 -0.43 8.14 -2.39 -0.02 -0.45 16 31 H 0.08 -0.35 8.14 -2.39 -0.02 -0.37 16 32 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 33 H 0.09 -0.56 8.14 -2.39 -0.02 -0.58 16 34 H 0.05 -0.13 8.14 -2.39 -0.02 -0.15 16 35 H 0.06 -0.25 8.14 -2.39 -0.02 -0.27 16 36 H 0.40 -2.62 9.12 -74.06 -0.68 -3.29 16 37 H 0.06 0.32 7.82 -2.39 -0.02 0.30 16 38 H 0.06 0.19 8.14 -2.39 -0.02 0.17 16 39 H 0.07 0.15 8.14 -2.39 -0.02 0.13 16 40 H 0.05 0.36 8.14 -2.39 -0.02 0.34 16 41 H 0.19 -1.64 4.92 -2.91 -0.01 -1.66 16 Total: 0.00 -19.68 336.34 -3.34 -23.02 By element: Atomic # 1 Polarization: -10.41 SS G_CDS: -0.95 Total: -11.36 kcal Atomic # 6 Polarization: 5.38 SS G_CDS: 3.52 Total: 8.90 kcal Atomic # 7 Polarization: -2.63 SS G_CDS: -4.02 Total: -6.65 kcal Atomic # 8 Polarization: -7.23 SS G_CDS: -3.94 Total: -11.17 kcal Atomic # 14 Polarization: -4.79 SS G_CDS: 2.05 Total: -2.74 kcal Total: -19.68 -3.34 -23.02 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207542_13287726.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -71.827 kcal (2) G-P(sol) polarization free energy of solvation -19.683 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -91.510 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.342 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.025 kcal (6) G-S(sol) free energy of system = (1) + (5) -94.852 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds