Wall clock time and date at job start Tue Mar 9 2021 12:55:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.34655 * 124.85229 * 2 1 4 4 C 1.36772 * 108.40293 * 180.02562 * 3 2 1 5 5 C 1.47259 * 126.94744 * 180.02562 * 4 3 2 6 6 O 1.21625 * 119.99734 * 179.97438 * 5 4 3 7 7 N 1.34775 * 119.99916 * 359.97438 * 5 4 3 8 8 C 1.46501 * 119.99925 * 180.02562 * 7 5 4 9 9 H 1.08991 * 109.47269 * 34.99707 * 8 7 5 10 10 C 1.52995 * 109.47027 * 155.00243 * 8 7 5 11 11 C 1.53006 * 109.47066 * 179.97438 * 10 8 7 12 12 C 1.52999 * 109.47002 * 299.99911 * 11 10 8 13 13 H 1.09005 * 109.46865 * 299.99756 * 12 11 10 14 14 C 1.52997 * 109.47105 * 180.02562 * 12 11 10 15 15 O 1.42897 * 109.47243 * 174.99986 * 14 12 11 16 16 C 1.53003 * 109.47403 * 59.99764 * 12 11 10 17 17 C 1.52995 * 109.46914 * 299.99994 * 16 12 11 18 18 C 1.46688 * 106.11009 * 0.02562 * 4 3 2 19 19 C 1.34483 * 106.33484 * 359.73220 * 18 4 3 20 20 C 1.50703 * 125.57463 * 180.26350 * 19 18 4 21 21 O 1.42898 * 109.47325 * 210.18054 * 20 19 18 22 22 Si 1.86299 * 109.47305 * 330.18589 * 20 19 18 23 23 H 1.09002 * 109.47391 * 90.01864 * 1 2 3 24 24 H 1.09001 * 109.46813 * 330.01920 * 1 2 3 25 25 H 1.09004 * 109.47041 * 210.02047 * 1 2 3 26 26 H 1.08008 * 125.79960 * 359.97438 * 3 2 1 27 27 H 0.97000 * 119.99806 * 359.97438 * 7 5 4 28 28 H 1.09003 * 109.47020 * 299.99388 * 10 8 7 29 29 H 1.08999 * 109.47846 * 59.99712 * 10 8 7 30 30 H 1.09005 * 109.47111 * 59.99517 * 11 10 8 31 31 H 1.08995 * 109.47241 * 179.97438 * 11 10 8 32 32 H 1.09004 * 109.46796 * 294.99946 * 14 12 11 33 33 H 1.09003 * 109.47281 * 54.99710 * 14 12 11 34 34 H 0.96701 * 114.00325 * 180.02562 * 15 14 12 35 35 H 1.09000 * 109.46502 * 59.99803 * 16 12 11 36 36 H 1.08993 * 109.47221 * 180.02562 * 16 12 11 37 37 H 1.08997 * 109.47580 * 299.99763 * 17 16 12 38 38 H 1.08999 * 109.47078 * 179.97438 * 17 16 12 39 39 H 1.08004 * 126.83758 * 180.02562 * 18 4 3 40 40 H 1.09008 * 109.46805 * 90.18911 * 20 19 18 41 41 H 0.96707 * 113.99770 * 60.00354 * 21 20 19 42 42 H 1.48501 * 109.99509 * 58.68081 * 22 20 19 43 43 H 1.48500 * 109.99953 * 179.97438 * 22 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2345 1.1050 0.0000 4 6 3.5462 0.7177 -0.0006 5 6 4.7284 1.5958 -0.0003 6 8 5.8446 1.1128 -0.0004 7 7 4.5734 2.9346 0.0002 8 6 5.7495 3.8081 -0.0001 9 1 6.5428 3.3492 -0.5899 10 6 5.3791 5.1619 -0.6091 11 6 6.6072 6.0744 -0.6088 12 6 7.0916 6.2771 0.8283 13 1 6.2979 6.7359 1.4179 14 6 8.3193 7.1901 0.8287 15 8 8.7016 7.4736 2.1760 16 6 7.4620 4.9233 1.4374 17 6 6.2338 4.0109 1.4371 18 6 3.5375 -0.7491 -0.0016 19 6 2.2448 -1.1197 0.0045 20 6 1.7398 -2.5396 0.0116 21 8 0.4804 -2.6007 -0.6609 22 14 2.9643 -3.6387 -0.8621 23 1 -0.3634 -0.0003 -1.0277 24 1 -0.3633 0.8902 0.5135 25 1 -0.3633 -0.8898 0.5142 26 1 1.8767 2.1241 -0.0004 27 1 3.6831 3.3197 -0.0001 28 1 5.0336 5.0174 -1.6328 29 1 4.5857 5.6209 -0.0193 30 1 7.4010 5.6156 -1.1984 31 1 6.3435 7.0387 -1.0431 32 1 9.1419 6.6930 0.3145 33 1 8.0797 8.1214 0.3153 34 1 9.4749 8.0492 2.2527 35 1 8.2556 4.4646 0.8477 36 1 7.8066 5.0677 2.4613 37 1 5.4402 4.4696 2.0267 38 1 6.4978 3.0463 1.8706 39 1 4.3981 -1.4018 -0.0018 40 1 1.6186 -2.8770 1.0411 41 1 0.5131 -2.3141 -1.5839 42 1 4.2867 -3.5594 -0.1911 43 1 2.4782 -5.0418 -0.8613 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207542_13287730.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:55:20 Heat of formation + Delta-G solvation = -80.893754 kcal Electronic energy + Delta-G solvation = -23960.916729 eV Core-core repulsion = 20393.796900 eV Total energy + Delta-G solvation = -3567.119829 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.162 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -42.45700 -40.70906 -39.23479 -37.82878 -37.33091 -35.00569 -33.80732 -31.94889 -31.73947 -30.73018 -27.74529 -26.54263 -25.78636 -23.82183 -23.52007 -21.95806 -21.14499 -20.77671 -20.32954 -19.05408 -18.18535 -17.48777 -17.01753 -16.93492 -16.79090 -16.18050 -15.78813 -15.66905 -15.43988 -15.36810 -14.91885 -14.87437 -14.65607 -14.46635 -14.06139 -13.90421 -13.52292 -13.45113 -13.31269 -13.22200 -13.08410 -12.93576 -12.25539 -12.16249 -12.10617 -11.94505 -11.57016 -11.38732 -11.21670 -10.84418 -10.80141 -10.64052 -9.89220 -9.54785 -9.19766 -5.00328 0.79674 1.06549 1.41984 1.65392 1.86491 2.04478 2.35683 2.74958 3.19006 3.21867 3.53980 3.64869 3.75721 3.80030 3.82685 3.96759 4.03298 4.13406 4.25087 4.29209 4.36877 4.37679 4.46434 4.49156 4.50720 4.52951 4.57210 4.63457 4.65965 4.83090 4.90265 4.96315 5.01335 5.07957 5.14148 5.21040 5.35021 5.44661 5.50928 5.64723 5.74178 5.97724 6.15189 6.34292 6.70485 6.73712 7.53887 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.066 3.934 2 N -0.425 5.425 3 C 0.050 3.950 4 C -0.226 4.226 5 C 0.591 3.409 6 O -0.542 6.542 7 N -0.729 5.729 8 C 0.147 3.853 9 H 0.089 0.911 10 C -0.124 4.124 11 C -0.110 4.110 12 C -0.089 4.089 13 H 0.078 0.922 14 C 0.078 3.922 15 O -0.573 6.573 16 C -0.108 4.108 17 C -0.129 4.129 18 C -0.137 4.137 19 C -0.020 4.020 20 C -0.043 4.043 21 O -0.544 6.544 22 Si 0.715 3.285 23 H 0.078 0.922 24 H 0.080 0.920 25 H 0.099 0.901 26 H 0.170 0.830 27 H 0.395 0.605 28 H 0.072 0.928 29 H 0.068 0.932 30 H 0.069 0.931 31 H 0.070 0.930 32 H 0.046 0.954 33 H 0.045 0.955 34 H 0.380 0.620 35 H 0.063 0.937 36 H 0.073 0.927 37 H 0.063 0.937 38 H 0.069 0.931 39 H 0.151 0.849 40 H 0.117 0.883 41 H 0.380 0.620 42 H -0.251 1.251 43 H -0.252 1.252 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.300 3.749 -3.633 6.763 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 N -0.100 5.100 3 C -0.086 4.086 4 C -0.236 4.236 5 C 0.380 3.620 6 O -0.419 6.419 7 N -0.380 5.380 8 C 0.043 3.957 9 H 0.107 0.893 10 C -0.162 4.162 11 C -0.148 4.148 12 C -0.108 4.108 13 H 0.096 0.904 14 C 0.001 3.999 15 O -0.379 6.379 16 C -0.146 4.146 17 C -0.168 4.168 18 C -0.161 4.161 19 C -0.129 4.129 20 C -0.153 4.153 21 O -0.350 6.350 22 Si 0.614 3.386 23 H 0.096 0.904 24 H 0.099 0.901 25 H 0.117 0.883 26 H 0.187 0.813 27 H 0.229 0.771 28 H 0.090 0.910 29 H 0.087 0.913 30 H 0.087 0.913 31 H 0.089 0.911 32 H 0.065 0.935 33 H 0.063 0.937 34 H 0.227 0.773 35 H 0.082 0.918 36 H 0.091 0.909 37 H 0.081 0.919 38 H 0.088 0.912 39 H 0.169 0.831 40 H 0.134 0.866 41 H 0.227 0.773 42 H -0.175 1.175 43 H -0.177 1.177 Dipole moment (debyes) X Y Z Total from point charges -4.036 2.057 -2.865 5.360 hybrid contribution -0.295 1.093 0.467 1.225 sum -4.331 3.150 -2.398 5.868 Atomic orbital electron populations 1.22264 0.76227 1.05042 1.03970 1.43472 1.06992 1.04913 1.54605 1.21912 0.90108 0.91750 1.04839 1.20329 0.91552 0.93923 1.17787 1.17394 0.88047 0.81315 0.75262 1.90784 1.25834 1.75171 1.50124 1.45908 1.09559 1.05782 1.76728 1.20985 0.88265 0.89588 0.96902 0.89277 1.21772 0.98524 0.94451 1.01441 1.21458 0.97606 0.99762 0.95959 1.21197 0.97067 0.95830 0.96694 0.90357 1.22234 0.96628 0.97724 0.83348 1.86475 1.52108 1.72430 1.26880 1.21480 0.97358 0.93801 1.01925 1.21934 0.98069 1.00375 0.96410 1.21734 0.94953 0.93302 1.06123 1.20800 0.90581 0.89073 1.12427 1.24822 0.93561 0.94852 1.02086 1.86474 1.29791 1.89652 1.29048 0.94091 0.76854 0.77612 0.90016 0.90390 0.90103 0.88250 0.81258 0.77085 0.90960 0.91283 0.91265 0.91147 0.93548 0.93666 0.77309 0.91837 0.90870 0.91867 0.91241 0.83096 0.86550 0.77273 1.17532 1.17711 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.23 9.82 59.85 0.59 0.36 16 2 N -0.43 0.31 3.09 -119.89 -0.37 -0.06 16 3 C 0.05 -0.03 10.83 -16.84 -0.18 -0.21 16 4 C -0.23 -0.55 6.29 -103.35 -0.65 -1.20 16 5 C 0.59 2.34 7.77 -12.60 -0.10 2.24 16 6 O -0.54 -4.40 16.63 5.26 0.09 -4.31 16 7 N -0.73 -0.41 5.07 -54.93 -0.28 -0.69 16 8 C 0.15 0.11 2.46 -67.93 -0.17 -0.06 16 9 H 0.09 0.25 7.58 -51.93 -0.39 -0.14 16 10 C -0.12 0.20 5.39 -26.73 -0.14 0.05 16 11 C -0.11 0.16 5.20 -26.73 -0.14 0.02 16 12 C -0.09 0.01 2.43 -90.62 -0.22 -0.21 16 13 H 0.08 0.05 8.14 -51.93 -0.42 -0.38 16 14 C 0.08 -0.03 6.43 37.16 0.24 0.21 16 15 O -0.57 -0.59 13.20 -35.23 -0.46 -1.05 16 16 C -0.11 -0.13 5.10 -26.73 -0.14 -0.26 16 17 C -0.13 -0.19 5.49 -26.73 -0.15 -0.34 16 18 C -0.14 -0.37 9.49 -37.50 -0.36 -0.72 16 19 C -0.02 -0.01 6.14 -81.86 -0.50 -0.51 16 20 C -0.04 0.03 2.86 36.01 0.10 0.13 16 21 O -0.54 0.88 10.31 -35.23 -0.36 0.52 16 22 Si 0.71 -0.62 31.29 -169.99 -5.32 -5.94 16 23 H 0.08 -0.37 8.14 -51.93 -0.42 -0.79 16 24 H 0.08 -0.38 8.13 -51.93 -0.42 -0.80 16 25 H 0.10 -0.25 6.71 -51.93 -0.35 -0.60 16 26 H 0.17 -0.70 7.45 -52.48 -0.39 -1.09 16 27 H 0.40 -0.94 7.54 -40.82 -0.31 -1.24 16 28 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 29 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 30 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 31 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 32 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 33 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 34 H 0.38 -1.16 9.12 45.56 0.42 -0.75 16 35 H 0.06 0.09 8.14 -51.93 -0.42 -0.33 16 36 H 0.07 0.18 7.82 -51.93 -0.41 -0.23 16 37 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 38 H 0.07 0.26 8.14 -51.93 -0.42 -0.16 16 39 H 0.15 0.49 6.67 -52.48 -0.35 0.14 16 40 H 0.12 -0.03 7.96 -51.92 -0.41 -0.45 16 41 H 0.38 -1.88 8.70 45.56 0.40 -1.48 16 42 H -0.25 -0.52 6.77 56.52 0.38 -0.13 16 43 H -0.25 -0.45 7.11 56.52 0.40 -0.05 16 LS Contribution 346.41 15.07 5.22 5.22 Total: 0.00 -9.44 346.41 -9.39 -18.83 By element: Atomic # 1 Polarization: -5.94 SS G_CDS: -6.09 Total: -12.02 kcal Atomic # 6 Polarization: 1.32 SS G_CDS: -1.81 Total: -0.50 kcal Atomic # 7 Polarization: -0.10 SS G_CDS: -0.65 Total: -0.75 kcal Atomic # 8 Polarization: -4.10 SS G_CDS: -0.74 Total: -4.84 kcal Atomic # 14 Polarization: -0.62 SS G_CDS: -5.32 Total: -5.94 kcal Total LS contribution 5.22 Total: 5.22 kcal Total: -9.44 -9.39 -18.83 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207542_13287730.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -62.068 kcal (2) G-P(sol) polarization free energy of solvation -9.439 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.507 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.387 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.826 kcal (6) G-S(sol) free energy of system = (1) + (5) -80.894 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds