Wall clock time and date at job start Tue Mar 9 2021 12:55:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.38973 * 119.95759 * 2 1 4 4 O 1.35713 * 119.91139 * 359.97438 * 3 2 1 5 5 C 1.39011 * 120.17927 * 179.97438 * 3 2 1 6 6 C 1.50694 * 119.95801 * 180.02562 * 5 3 2 7 7 O 1.42902 * 109.47348 * 284.99810 * 6 5 3 8 8 Si 1.86301 * 109.47277 * 164.99844 * 6 5 3 9 9 C 1.37692 * 120.08920 * 359.76179 * 5 3 2 10 10 C 1.39760 * 119.90363 * 0.48963 * 9 5 3 11 11 C 1.47601 * 120.08223 * 179.76433 * 10 9 5 12 12 O 1.21583 * 120.00524 * 359.72498 * 11 10 9 13 13 N 1.34777 * 119.99693 * 179.72981 * 11 10 9 14 14 C 1.46505 * 119.99797 * 179.97438 * 13 11 10 15 15 H 1.08992 * 109.47276 * 325.00066 * 14 13 11 16 16 C 1.53002 * 109.46958 * 84.99979 * 14 13 11 17 17 C 1.52997 * 109.46978 * 180.02562 * 16 14 13 18 18 C 1.53006 * 109.47164 * 299.99874 * 17 16 14 19 19 H 1.08998 * 109.46505 * 299.99708 * 18 17 16 20 20 C 1.52992 * 109.47223 * 180.02562 * 18 17 16 21 21 O 1.42905 * 109.47641 * 64.99686 * 20 18 17 22 22 C 1.52997 * 109.47127 * 59.99836 * 18 17 16 23 23 C 1.52996 * 109.46998 * 204.99519 * 14 13 11 24 24 C 1.37726 * 119.95322 * 179.97438 * 2 1 3 25 25 H 1.09000 * 109.47031 * 270.02269 * 1 2 3 26 26 H 1.09007 * 109.47010 * 30.02248 * 1 2 3 27 27 H 1.08998 * 109.47093 * 150.02238 * 1 2 3 28 28 H 0.96707 * 113.99720 * 90.00423 * 4 3 2 29 29 H 1.08997 * 109.47540 * 44.99977 * 6 5 3 30 30 H 0.96704 * 113.99724 * 299.99753 * 7 6 5 31 31 H 1.48506 * 109.99903 * 58.68075 * 8 6 5 32 32 H 1.48496 * 110.00246 * 179.97438 * 8 6 5 33 33 H 1.07997 * 120.04802 * 180.27846 * 9 5 3 34 34 H 0.97001 * 120.00457 * 359.97438 * 13 11 10 35 35 H 1.09002 * 109.47097 * 299.99818 * 16 14 13 36 36 H 1.09001 * 109.47142 * 59.99782 * 16 14 13 37 37 H 1.09001 * 109.47375 * 59.99908 * 17 16 14 38 38 H 1.09000 * 109.47140 * 179.97438 * 17 16 14 39 39 H 1.09001 * 109.47563 * 185.00049 * 20 18 17 40 40 H 1.09004 * 109.47313 * 304.99704 * 20 18 17 41 41 H 0.96695 * 114.00050 * 180.02562 * 21 20 18 42 42 H 1.09002 * 109.47153 * 180.02562 * 22 18 17 43 43 H 1.09001 * 109.46832 * 60.00321 * 22 18 17 44 44 H 1.09004 * 109.47368 * 60.00227 * 23 14 13 45 45 H 1.09001 * 109.47372 * 300.00383 * 23 14 13 46 46 H 1.07996 * 120.04630 * 359.97438 * 24 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2010 1.2041 0.0000 4 8 1.5197 2.3778 -0.0005 5 6 3.5911 1.2094 0.0005 6 6 4.3385 2.5179 0.0011 7 8 4.2726 3.1048 -1.3002 8 14 6.1196 2.2156 0.4564 9 6 4.2860 0.0208 0.0060 10 6 3.5918 -1.1922 0.0007 11 6 4.3327 -2.4688 0.0013 12 8 5.5486 -2.4660 0.0014 13 7 3.6615 -3.6375 0.0017 14 6 4.3970 -4.9046 0.0017 15 1 5.3072 -4.7963 -0.5879 16 6 4.7621 -5.2823 1.4387 17 6 5.5307 -6.6052 1.4387 18 6 4.6564 -7.7030 0.8293 19 1 3.7461 -7.8116 1.4190 20 6 5.4247 -9.0260 0.8298 21 8 5.6638 -9.4375 2.1773 22 6 4.2912 -7.3253 -0.6077 23 6 3.5221 -6.0020 -0.6074 24 6 2.1946 -1.1933 0.0005 25 1 -0.3633 0.0004 1.0277 26 1 -0.3633 0.8898 -0.5142 27 1 -0.3633 -0.8902 -0.5135 28 1 1.3220 2.7182 0.8828 29 1 3.8875 3.1937 0.7277 30 1 4.6566 2.5572 -1.9985 31 1 6.7371 1.2706 -0.5086 32 1 6.8677 3.4983 0.4599 33 1 5.3659 0.0257 0.0110 34 1 2.6915 -3.6398 0.0019 35 1 5.3854 -4.5004 1.8727 36 1 3.8518 -5.3905 2.0284 37 1 6.4410 -6.4965 0.8491 38 1 5.7912 -6.8740 2.4624 39 1 4.8377 -9.7874 0.3162 40 1 6.3769 -8.8934 0.3160 41 1 6.1483 -10.2709 2.2539 42 1 3.6679 -8.1072 -1.0417 43 1 5.2015 -7.2166 -1.1973 44 1 3.2619 -5.7330 -1.6312 45 1 2.6118 -6.1102 -0.0177 46 1 1.6547 -2.1286 0.0014 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7207542_13287732.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:55:23 Heat of formation + Delta-G solvation = -152.490123 kcal Electronic energy + Delta-G solvation = -27559.309130 eV Core-core repulsion = 23607.602228 eV Total energy + Delta-G solvation = -3951.706902 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.166 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -41.79805 -40.79743 -39.55011 -37.99156 -37.61139 -37.34604 -35.34791 -34.00716 -32.37682 -31.77943 -30.78353 -27.99043 -27.01894 -26.34371 -24.54205 -23.76033 -22.33238 -21.92767 -21.51116 -20.78760 -19.61459 -18.85867 -18.20206 -18.08587 -17.60226 -16.83050 -16.53766 -16.45002 -16.10660 -15.88061 -15.83517 -15.73493 -15.22663 -15.08046 -14.75305 -14.59059 -14.37098 -14.10019 -13.96274 -13.87275 -13.55044 -13.28852 -13.17124 -12.99178 -12.89038 -12.79519 -12.47525 -12.26119 -12.11968 -11.93992 -11.64982 -11.59308 -11.44361 -11.31426 -11.02123 -10.81653 -10.63825 -10.20341 -9.98180 -9.64717 -5.03386 -0.39678 0.06303 1.18915 1.50664 1.60774 1.83929 2.01223 2.55861 3.11812 3.29642 3.31082 3.50454 3.54981 3.63189 3.71140 3.78640 3.95842 3.99120 4.04756 4.16400 4.29922 4.34008 4.37432 4.42072 4.47562 4.49841 4.53376 4.59699 4.63888 4.70427 4.74243 4.82873 4.83832 4.95553 5.03144 5.05414 5.09779 5.11433 5.15041 5.21169 5.21977 5.32736 5.37118 5.41603 5.49792 5.60847 6.38372 6.44018 6.76511 6.89594 7.10990 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.112 4.112 2 C -0.120 4.120 3 C 0.159 3.841 4 O -0.496 6.496 5 C -0.153 4.153 6 C -0.060 4.060 7 O -0.540 6.540 8 Si 0.747 3.253 9 C -0.066 4.066 10 C -0.151 4.151 11 C 0.558 3.442 12 O -0.579 6.579 13 N -0.707 5.707 14 C 0.146 3.854 15 H 0.067 0.933 16 C -0.123 4.123 17 C -0.104 4.104 18 C -0.087 4.087 19 H 0.076 0.924 20 C 0.075 3.925 21 O -0.596 6.596 22 C -0.107 4.107 23 C -0.118 4.118 24 C -0.054 4.054 25 H 0.088 0.912 26 H 0.068 0.932 27 H 0.084 0.916 28 H 0.413 0.587 29 H 0.134 0.866 30 H 0.382 0.618 31 H -0.297 1.297 32 H -0.291 1.291 33 H 0.130 0.870 34 H 0.415 0.585 35 H 0.045 0.955 36 H 0.075 0.925 37 H 0.054 0.946 38 H 0.059 0.941 39 H 0.059 0.941 40 H 0.048 0.952 41 H 0.395 0.605 42 H 0.086 0.914 43 H 0.065 0.935 44 H 0.081 0.919 45 H 0.087 0.913 46 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.471 -4.741 1.878 8.239 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.168 4.168 2 C -0.120 4.120 3 C 0.114 3.886 4 O -0.310 6.310 5 C -0.154 4.154 6 C -0.170 4.170 7 O -0.347 6.347 8 Si 0.654 3.346 9 C -0.085 4.085 10 C -0.154 4.154 11 C 0.347 3.653 12 O -0.460 6.460 13 N -0.359 5.359 14 C 0.041 3.959 15 H 0.085 0.915 16 C -0.162 4.162 17 C -0.142 4.142 18 C -0.105 4.105 19 H 0.095 0.905 20 C -0.003 4.003 21 O -0.404 6.404 22 C -0.145 4.145 23 C -0.155 4.155 24 C -0.072 4.072 25 H 0.106 0.894 26 H 0.087 0.913 27 H 0.102 0.898 28 H 0.274 0.726 29 H 0.151 0.849 30 H 0.231 0.769 31 H -0.224 1.224 32 H -0.218 1.218 33 H 0.148 0.852 34 H 0.253 0.747 35 H 0.064 0.936 36 H 0.093 0.907 37 H 0.073 0.927 38 H 0.078 0.922 39 H 0.077 0.923 40 H 0.066 0.934 41 H 0.245 0.755 42 H 0.105 0.895 43 H 0.084 0.916 44 H 0.100 0.900 45 H 0.105 0.895 46 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -5.385 -3.720 1.491 6.713 hybrid contribution 0.289 -0.337 -0.845 0.954 sum -5.096 -4.057 0.646 6.546 Atomic orbital electron populations 1.20770 0.88182 1.04052 1.03813 1.20454 0.98358 0.91693 1.01546 1.18424 0.88592 0.85937 0.95682 1.84736 1.75408 1.35577 1.35243 1.20504 0.94216 0.95347 1.05341 1.24877 1.09849 0.93985 0.88304 1.86613 1.82885 1.48159 1.17065 0.94194 0.73362 0.77143 0.89886 1.21110 1.00332 0.91074 0.95982 1.19804 0.94420 0.92523 1.08677 1.18420 0.86807 0.84648 0.75474 1.90788 1.15330 1.88138 1.51728 1.45880 1.11054 1.04752 1.74173 1.21036 0.95744 0.82505 0.96580 0.91519 1.21853 1.00770 0.97041 0.96514 1.21419 0.98066 0.93622 1.01124 1.21183 0.98812 0.93208 0.97328 0.90530 1.22311 0.98955 0.95967 0.83021 1.86430 1.80277 1.46015 1.27695 1.21461 1.00920 0.97073 0.95049 1.21764 0.98663 0.93056 1.02056 1.21365 0.91549 0.99113 0.95174 0.89362 0.91271 0.89752 0.72599 0.84870 0.76881 1.22420 1.21835 0.85241 0.74699 0.93623 0.90674 0.92683 0.92229 0.92289 0.93368 0.75546 0.89503 0.91617 0.90011 0.89467 0.81981 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.75 9.78 71.24 0.70 1.45 16 2 C -0.12 0.32 5.89 -19.81 -0.12 0.20 16 3 C 0.16 0.03 6.66 22.63 0.15 0.18 16 4 O -0.50 0.55 11.84 -90.35 -1.07 -0.52 16 5 C -0.15 -0.29 5.27 -19.81 -0.10 -0.39 16 6 C -0.06 -0.10 2.37 71.23 0.17 0.07 16 7 O -0.54 -3.03 12.88 -148.98 -1.92 -4.95 16 8 Si 0.75 1.97 30.23 68.60 2.07 4.04 16 9 C -0.07 -0.28 8.20 22.51 0.18 -0.10 16 10 C -0.15 -0.38 5.88 -20.08 -0.12 -0.50 16 11 C 0.56 3.21 7.73 86.71 0.67 3.88 16 12 O -0.58 -8.49 16.00 -3.98 -0.06 -8.56 16 13 N -0.71 0.88 5.03 -445.64 -2.24 -1.36 16 14 C 0.15 -0.03 2.45 44.99 0.11 0.08 16 15 H 0.07 0.34 7.58 -2.39 -0.02 0.33 16 16 C -0.12 -0.18 5.49 30.59 0.17 -0.01 16 17 C -0.10 -0.17 5.10 30.60 0.16 -0.02 16 18 C -0.09 0.16 2.43 -10.79 -0.03 0.14 16 19 H 0.08 -0.08 8.14 -2.39 -0.02 -0.10 16 20 C 0.07 -0.15 6.43 71.98 0.46 0.31 16 21 O -0.60 -0.61 13.20 -148.98 -1.97 -2.57 16 22 C -0.11 0.55 5.21 30.61 0.16 0.71 16 23 C -0.12 0.69 5.39 30.61 0.17 0.85 16 24 C -0.05 0.18 9.18 22.50 0.21 0.39 16 25 H 0.09 -0.82 8.14 -2.39 -0.02 -0.84 16 26 H 0.07 -0.30 7.52 -2.38 -0.02 -0.32 16 27 H 0.08 -0.77 8.08 -2.39 -0.02 -0.79 16 28 H 0.41 -4.31 9.06 -74.05 -0.67 -4.99 16 29 H 0.13 -0.27 7.82 -2.39 -0.02 -0.29 16 30 H 0.38 0.43 8.70 -74.05 -0.64 -0.22 16 31 H -0.30 -2.75 6.69 99.48 0.67 -2.09 16 32 H -0.29 -2.53 7.11 99.48 0.71 -1.82 16 33 H 0.13 0.89 4.43 -2.91 -0.01 0.88 16 34 H 0.41 -3.36 6.62 -92.71 -0.61 -3.97 16 35 H 0.04 0.30 8.14 -2.39 -0.02 0.28 16 36 H 0.07 -0.05 8.14 -2.39 -0.02 -0.06 16 37 H 0.05 0.17 8.14 -2.39 -0.02 0.15 16 38 H 0.06 0.27 7.82 -2.39 -0.02 0.26 16 39 H 0.06 -0.28 8.14 -2.39 -0.02 -0.30 16 40 H 0.05 -0.13 8.14 -2.39 -0.02 -0.15 16 41 H 0.40 -2.78 9.12 -74.06 -0.68 -3.45 16 42 H 0.09 -0.66 8.14 -2.39 -0.02 -0.67 16 43 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 44 H 0.08 -0.57 8.14 -2.39 -0.02 -0.59 16 45 H 0.09 -0.74 8.14 -2.39 -0.02 -0.76 16 46 H 0.16 -1.69 6.39 -2.91 -0.02 -1.71 16 Total: 0.00 -24.36 369.15 -3.82 -28.18 By element: Atomic # 1 Polarization: -19.94 SS G_CDS: -1.57 Total: -21.51 kcal Atomic # 6 Polarization: 4.31 SS G_CDS: 2.93 Total: 7.24 kcal Atomic # 7 Polarization: 0.88 SS G_CDS: -2.24 Total: -1.36 kcal Atomic # 8 Polarization: -11.58 SS G_CDS: -5.02 Total: -16.59 kcal Atomic # 14 Polarization: 1.97 SS G_CDS: 2.07 Total: 4.04 kcal Total: -24.36 -3.82 -28.18 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207542_13287732.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -124.311 kcal (2) G-P(sol) polarization free energy of solvation -24.359 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -148.670 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.820 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.179 kcal (6) G-S(sol) free energy of system = (1) + (5) -152.490 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds