Wall clock time and date at job start Tue Mar 9 2021 12:55:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.36407 * 125.80042 * 2 1 4 4 C 1.47386 * 127.19572 * 0.02562 * 3 2 1 5 5 O 1.21616 * 119.99588 * 359.97438 * 4 3 2 6 6 N 1.34770 * 120.00177 * 179.97438 * 4 3 2 7 7 C 1.46497 * 119.99936 * 179.97438 * 6 4 3 8 8 H 1.08999 * 109.47774 * 325.00175 * 7 6 4 9 9 C 1.53003 * 109.47011 * 85.00534 * 7 6 4 10 10 C 1.53002 * 109.47365 * 180.02562 * 9 7 6 11 11 C 1.53002 * 109.46918 * 299.99575 * 10 9 7 12 12 H 1.08994 * 109.47199 * 300.00098 * 11 10 9 13 13 C 1.52999 * 109.47069 * 179.97438 * 11 10 9 14 14 O 1.42905 * 109.46728 * 65.00521 * 13 11 10 15 15 C 1.53003 * 109.46755 * 60.00051 * 11 10 9 16 16 C 1.52993 * 109.47495 * 299.99683 * 15 11 10 17 17 C 1.47020 * 105.61722 * 180.26649 * 3 2 1 18 18 C 1.34181 * 105.94939 * 359.57454 * 17 3 2 19 19 C 1.50697 * 125.43620 * 180.14149 * 18 17 3 20 20 O 1.42901 * 109.47621 * 300.31543 * 19 18 17 21 21 Si 1.86300 * 109.46963 * 180.31384 * 19 18 17 22 22 O 1.33652 * 125.79861 * 180.02562 * 2 1 3 23 23 H 1.08991 * 109.47448 * 89.99138 * 1 2 3 24 24 H 1.09003 * 109.46669 * 209.99773 * 1 2 3 25 25 H 1.09002 * 109.46641 * 329.99226 * 1 2 3 26 26 H 0.97006 * 120.00158 * 359.97438 * 6 4 3 27 27 H 1.09000 * 109.46883 * 300.00187 * 9 7 6 28 28 H 1.08994 * 109.47229 * 59.99732 * 9 7 6 29 29 H 1.09000 * 109.47089 * 179.97438 * 10 9 7 30 30 H 1.08994 * 109.47265 * 59.99632 * 10 9 7 31 31 H 1.09000 * 109.47486 * 305.00460 * 13 11 10 32 32 H 1.09001 * 109.47362 * 184.99737 * 13 11 10 33 33 H 0.96696 * 114.00036 * 179.97438 * 14 13 11 34 34 H 1.08999 * 109.47145 * 60.00542 * 15 11 10 35 35 H 1.09000 * 109.46883 * 179.97438 * 15 11 10 36 36 H 1.09000 * 109.47744 * 180.02562 * 16 15 11 37 37 H 1.08999 * 109.47626 * 300.00565 * 16 15 11 38 38 H 1.08003 * 127.02857 * 179.74026 * 17 3 2 39 39 H 1.09002 * 109.46981 * 60.31646 * 19 18 17 40 40 H 0.96700 * 113.99424 * 300.00400 * 20 19 18 41 41 H 1.48500 * 110.00241 * 58.68457 * 21 19 18 42 42 H 1.48508 * 109.99899 * 180.02562 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.3050 1.1063 0.0000 4 6 1.8740 2.5158 0.0005 5 8 0.6889 2.7892 0.0006 6 7 2.7930 3.5015 0.0010 7 6 2.3645 4.9024 0.0009 8 1 1.4535 5.0038 -0.5888 9 6 2.0947 5.3532 1.4379 10 6 1.6466 6.8162 1.4379 11 6 2.7474 7.6867 0.8286 12 1 3.6586 7.5858 1.4182 13 6 2.2991 9.1495 0.8280 14 8 2.1590 9.6053 2.1751 15 6 3.0173 7.2359 -0.6084 16 6 3.4653 5.7731 -0.6084 17 6 3.6849 0.5991 -0.0066 18 6 3.5859 -0.7390 -0.0003 19 6 4.7459 -1.7010 -0.0005 20 8 5.5422 -1.4869 -1.1676 21 14 4.1026 -3.4494 0.0001 22 8 2.2888 -1.0840 -0.0005 23 1 -0.3634 0.0002 -1.0276 24 1 -0.3633 -0.8900 0.5138 25 1 -0.3633 0.8900 0.5140 26 1 3.7382 3.2834 0.0013 27 1 1.3102 4.7333 1.8719 28 1 3.0057 5.2519 2.0276 29 1 1.4540 7.1372 2.4616 30 1 0.7355 6.9171 0.8483 31 1 1.3419 9.2361 0.3137 32 1 3.0438 9.7576 0.3144 33 1 1.8769 10.5271 2.2512 34 1 2.1061 7.3369 -1.1981 35 1 3.8012 7.8564 -1.0427 36 1 3.6580 5.4520 -1.6321 37 1 4.3765 5.6721 -0.0188 38 1 4.5928 1.1840 -0.0123 39 1 5.3539 -1.5372 0.8893 40 1 5.0646 -1.6155 -1.9985 41 1 3.2461 -3.6760 -1.1917 42 1 5.2369 -4.4080 0.0005 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207542_13308374.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:55:35 Heat of formation + Delta-G solvation = -118.640258 kcal Electronic energy + Delta-G solvation = -24191.977665 eV Core-core repulsion = 20525.502363 eV Total energy + Delta-G solvation = -3666.475302 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.150 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -43.71947 -40.91227 -39.42041 -38.21290 -37.42160 -35.18053 -34.07210 -33.11825 -31.80776 -31.30627 -29.36656 -26.64256 -25.54485 -24.10077 -23.77179 -22.54277 -21.59386 -21.17770 -20.38622 -18.99453 -18.24942 -17.89320 -17.68482 -17.26488 -16.70741 -16.28605 -16.00012 -15.96467 -15.72907 -15.50469 -14.97590 -14.79589 -14.53830 -14.24685 -14.15788 -13.95735 -13.88292 -13.84540 -13.47303 -13.17301 -13.01735 -12.95092 -12.82019 -12.24741 -12.15896 -12.10068 -11.62146 -11.44726 -11.28028 -11.01705 -10.88608 -10.80243 -10.69915 -9.99560 -9.53595 -5.01381 0.33357 0.84647 1.11294 1.43055 1.68457 1.89223 2.21075 2.41117 3.07508 3.18459 3.35102 3.58575 3.73075 3.78730 3.80457 3.95793 3.97970 4.14989 4.23942 4.27092 4.33223 4.41317 4.44052 4.45387 4.51946 4.56181 4.56605 4.61109 4.67295 4.77761 4.82181 4.92071 5.01759 5.07956 5.12580 5.14709 5.23791 5.27725 5.39116 5.45088 5.57703 5.91682 6.18761 6.56052 6.67886 7.29846 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 C 0.095 3.905 3 C -0.253 4.253 4 C 0.593 3.407 5 O -0.539 6.539 6 N -0.721 5.721 7 C 0.146 3.854 8 H 0.090 0.910 9 C -0.129 4.129 10 C -0.107 4.107 11 C -0.090 4.090 12 H 0.079 0.921 13 C 0.079 3.921 14 O -0.573 6.573 15 C -0.109 4.109 16 C -0.125 4.125 17 C -0.148 4.148 18 C -0.055 4.055 19 C -0.034 4.034 20 O -0.521 6.521 21 Si 0.702 3.298 22 O -0.168 6.168 23 H 0.091 0.909 24 H 0.082 0.918 25 H 0.111 0.889 26 H 0.400 0.600 27 H 0.069 0.931 28 H 0.064 0.936 29 H 0.074 0.926 30 H 0.063 0.937 31 H 0.046 0.954 32 H 0.045 0.955 33 H 0.380 0.620 34 H 0.069 0.931 35 H 0.071 0.929 36 H 0.072 0.928 37 H 0.070 0.930 38 H 0.158 0.842 39 H 0.137 0.863 40 H 0.381 0.619 41 H -0.256 1.256 42 H -0.249 1.249 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.026 0.749 -0.054 1.271 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.142 4.142 2 C 0.041 3.959 3 C -0.257 4.257 4 C 0.382 3.618 5 O -0.418 6.418 6 N -0.371 5.371 7 C 0.042 3.958 8 H 0.108 0.892 9 C -0.168 4.168 10 C -0.145 4.145 11 C -0.108 4.108 12 H 0.097 0.903 13 C 0.001 3.999 14 O -0.379 6.379 15 C -0.148 4.148 16 C -0.163 4.163 17 C -0.168 4.168 18 C -0.103 4.103 19 C -0.144 4.144 20 O -0.328 6.328 21 Si 0.601 3.399 22 O -0.065 6.065 23 H 0.109 0.891 24 H 0.101 0.899 25 H 0.130 0.870 26 H 0.234 0.766 27 H 0.088 0.912 28 H 0.083 0.917 29 H 0.092 0.908 30 H 0.082 0.918 31 H 0.064 0.936 32 H 0.064 0.936 33 H 0.227 0.773 34 H 0.087 0.913 35 H 0.089 0.911 36 H 0.090 0.910 37 H 0.088 0.912 38 H 0.175 0.825 39 H 0.155 0.845 40 H 0.229 0.771 41 H -0.180 1.180 42 H -0.173 1.173 Dipole moment (debyes) X Y Z Total from point charges 0.715 -0.611 0.073 0.943 hybrid contribution 0.696 1.237 -1.243 1.887 sum 1.411 0.626 -1.170 1.937 Atomic orbital electron populations 1.20701 0.83331 1.05509 1.04702 1.22921 0.94071 0.82845 0.96023 1.21148 0.93205 0.93878 1.17510 1.17164 0.85456 0.83681 0.75528 1.90774 1.16498 1.83995 1.50524 1.45861 1.09681 1.05920 1.75677 1.21035 0.98534 0.79118 0.97102 0.89203 1.21932 1.02005 0.96611 0.96208 1.21479 0.97698 0.93347 1.02001 1.21200 0.99848 0.93113 0.96663 0.90287 1.22230 0.99391 0.94919 0.83380 1.86474 1.91639 1.32915 1.26860 1.21454 1.02045 0.95253 0.96005 1.21776 0.98159 0.94852 1.01494 1.22576 0.96476 0.93494 1.04223 1.22546 0.82940 0.95554 1.09305 1.24337 0.90304 1.07677 0.92049 1.86661 1.38694 1.91735 1.15661 0.94354 0.81834 0.73692 0.90008 1.83673 1.16346 1.35056 1.71440 0.89075 0.89902 0.87047 0.76596 0.91225 0.91746 0.90771 0.91840 0.93550 0.93640 0.77280 0.91273 0.91069 0.90963 0.91153 0.82478 0.84526 0.77092 1.18028 1.17277 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.01 9.89 36.01 0.36 0.35 16 2 C 0.09 0.17 7.37 -34.97 -0.26 -0.09 16 3 C -0.25 -0.54 6.31 -103.28 -0.65 -1.19 16 4 C 0.59 1.81 7.78 -12.54 -0.10 1.71 16 5 O -0.54 -3.08 14.51 5.26 0.08 -3.01 16 6 N -0.72 -0.37 5.07 -54.89 -0.28 -0.65 16 7 C 0.15 0.05 2.45 -67.93 -0.17 -0.11 16 8 H 0.09 0.19 7.58 -51.93 -0.39 -0.20 16 9 C -0.13 -0.11 5.49 -26.73 -0.15 -0.26 16 10 C -0.11 -0.07 5.10 -26.73 -0.14 -0.21 16 11 C -0.09 0.03 2.43 -90.62 -0.22 -0.19 16 12 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 13 C 0.08 -0.04 6.43 37.16 0.24 0.19 16 14 O -0.57 -0.44 13.20 -35.23 -0.46 -0.90 16 15 C -0.11 0.17 5.20 -26.73 -0.14 0.03 16 16 C -0.12 0.19 5.39 -26.73 -0.14 0.05 16 17 C -0.15 -0.08 10.46 -37.45 -0.39 -0.47 16 18 C -0.06 -0.02 6.20 -35.74 -0.22 -0.25 16 19 C -0.03 0.03 2.97 36.00 0.11 0.14 16 20 O -0.52 0.02 12.86 -35.23 -0.45 -0.43 16 21 Si 0.70 -0.82 32.08 -169.99 -5.45 -6.27 16 22 O -0.17 -0.22 8.89 7.66 0.07 -0.15 16 23 H 0.09 -0.05 8.14 -51.93 -0.42 -0.48 16 24 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 25 H 0.11 0.14 6.48 -51.93 -0.34 -0.19 16 26 H 0.40 -0.63 7.78 -40.82 -0.32 -0.95 16 27 H 0.07 0.19 8.14 -51.93 -0.42 -0.23 16 28 H 0.06 0.04 8.14 -51.93 -0.42 -0.38 16 29 H 0.07 0.14 7.82 -51.93 -0.41 -0.27 16 30 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 31 H 0.05 -0.05 8.14 -51.93 -0.42 -0.48 16 32 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 33 H 0.38 -1.25 9.12 45.56 0.42 -0.84 16 34 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 35 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 36 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 37 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 38 H 0.16 -0.22 7.74 -52.48 -0.41 -0.62 16 39 H 0.14 -0.35 7.96 -51.93 -0.41 -0.76 16 40 H 0.38 -1.00 8.70 45.56 0.40 -0.60 16 41 H -0.26 -0.40 7.11 56.52 0.40 0.00 16 42 H -0.25 -0.33 7.11 56.52 0.40 0.07 16 LS Contribution 345.19 15.07 5.20 5.20 Total: 0.00 -7.56 345.19 -8.91 -16.46 By element: Atomic # 1 Polarization: -4.23 SS G_CDS: -5.73 Total: -9.97 kcal Atomic # 6 Polarization: 1.58 SS G_CDS: -1.87 Total: -0.29 kcal Atomic # 7 Polarization: -0.37 SS G_CDS: -0.28 Total: -0.65 kcal Atomic # 8 Polarization: -3.72 SS G_CDS: -0.77 Total: -4.49 kcal Atomic # 14 Polarization: -0.82 SS G_CDS: -5.45 Total: -6.27 kcal Total LS contribution 5.20 Total: 5.20 kcal Total: -7.56 -8.91 -16.46 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207542_13308374.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -102.176 kcal (2) G-P(sol) polarization free energy of solvation -7.556 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -109.732 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.908 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.464 kcal (6) G-S(sol) free energy of system = (1) + (5) -118.640 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds