Wall clock time and date at job start Tue Mar 9 2021 12:55:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86303 * 109.46926 * 2 1 4 4 C 1.50695 * 109.47084 * 119.99579 * 2 1 3 5 5 C 1.38501 * 119.80688 * 244.98026 * 4 2 1 6 6 C 1.37837 * 120.29836 * 179.76983 * 5 4 2 7 7 C 1.39663 * 119.90672 * 0.50954 * 6 5 4 8 8 C 1.47536 * 120.18921 * 179.77034 * 7 6 5 9 9 O 1.21590 * 119.99924 * 179.72122 * 8 7 6 10 10 N 1.34780 * 120.00155 * 359.72703 * 8 7 6 11 11 C 1.46506 * 120.00088 * 180.02562 * 10 8 7 12 12 H 1.09000 * 109.46872 * 324.99405 * 11 10 8 13 13 C 1.52997 * 109.47277 * 84.99368 * 11 10 8 14 14 C 1.52996 * 109.47165 * 180.02562 * 13 11 10 15 15 C 1.53002 * 109.46972 * 300.00293 * 14 13 11 16 16 H 1.09000 * 109.46986 * 299.99742 * 15 14 13 17 17 C 1.52996 * 109.47346 * 179.97438 * 15 14 13 18 18 O 1.42903 * 109.47094 * 64.99836 * 17 15 14 19 19 C 1.52997 * 109.47415 * 59.99860 * 15 14 13 20 20 C 1.52999 * 109.46691 * 204.99775 * 11 10 8 21 21 C 1.40176 * 119.62082 * 359.49272 * 7 6 5 22 22 O 1.35649 * 120.14960 * 180.23039 * 21 7 6 23 23 C 1.38101 * 119.80397 * 65.00565 * 4 2 1 24 24 H 0.96697 * 114.00213 * 299.99691 * 1 2 3 25 25 H 1.09000 * 109.47363 * 239.99971 * 2 1 3 26 26 H 1.48497 * 110.00286 * 178.67874 * 3 2 1 27 27 H 1.48506 * 109.99789 * 300.00200 * 3 2 1 28 28 H 1.07997 * 119.84734 * 0.02562 * 5 4 2 29 29 H 1.08000 * 120.04767 * 180.25898 * 6 5 4 30 30 H 0.97000 * 119.99750 * 359.97438 * 10 8 7 31 31 H 1.09000 * 109.47140 * 60.00200 * 13 11 10 32 32 H 1.09001 * 109.47375 * 300.00183 * 13 11 10 33 33 H 1.08992 * 109.47534 * 180.02562 * 14 13 11 34 34 H 1.08996 * 109.47134 * 59.99508 * 14 13 11 35 35 H 1.08998 * 109.47622 * 184.99440 * 17 15 14 36 36 H 1.09001 * 109.47244 * 305.00138 * 17 15 14 37 37 H 0.96699 * 114.00071 * 180.02562 * 18 17 15 38 38 H 1.09001 * 109.46922 * 180.02562 * 19 15 14 39 39 H 1.09000 * 109.47140 * 59.99976 * 19 15 14 40 40 H 1.08993 * 109.47839 * 59.99891 * 20 11 10 41 41 H 1.09000 * 109.47160 * 299.99453 * 20 11 10 42 42 H 0.96698 * 113.99812 * 90.00910 * 22 21 7 43 43 H 1.08003 * 119.95492 * 359.95794 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 2.6400 -0.0069 2.1903 6 6 3.1000 -0.6455 3.3219 7 6 2.8603 -2.0101 3.4976 8 6 3.3543 -2.7009 4.7040 9 8 3.1393 -3.8879 4.8558 10 7 4.0438 -2.0161 5.6379 11 6 4.5348 -2.7022 6.8357 12 1 3.8185 -3.4671 7.1355 13 6 5.8834 -3.3576 6.5313 14 6 6.3958 -4.0746 7.7819 15 6 6.5652 -3.0624 8.9167 16 1 7.2816 -2.2974 8.6173 17 6 7.0770 -3.7794 10.1676 18 8 8.3875 -4.2925 9.9199 19 6 5.2166 -2.4070 9.2211 20 6 4.7043 -1.6895 7.9700 21 6 2.1427 -2.7184 2.5238 22 8 1.8997 -4.0431 2.6858 23 6 1.6827 -2.0589 1.3941 24 1 -0.3933 0.4416 0.7650 25 1 1.7924 -0.5138 -0.8900 26 1 3.5345 1.7705 0.0322 27 1 1.5613 2.4679 -1.2085 28 1 2.8294 1.0474 2.0534 29 1 3.6486 -0.0922 4.0698 30 1 4.2156 -1.0692 5.5167 31 1 6.5997 -2.5926 6.2315 32 1 5.7626 -4.0790 5.7231 33 1 7.3567 -4.5411 7.5653 34 1 5.6794 -4.8395 8.0814 35 1 7.1134 -3.0767 11.0000 36 1 6.4058 -4.6018 10.4153 37 1 8.7751 -4.7610 10.6718 38 1 5.3375 -1.6856 10.0293 39 1 4.5002 -3.1720 9.5205 40 1 3.7436 -1.2226 8.1869 41 1 5.4206 -0.9246 7.6702 42 1 1.0745 -4.2376 3.1509 43 1 1.1291 -2.6004 0.6413 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207542_13422076.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:55:43 Heat of formation + Delta-G solvation = -142.560081 kcal Electronic energy + Delta-G solvation = -25464.548417 eV Core-core repulsion = 21668.809733 eV Total energy + Delta-G solvation = -3795.738684 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -41.68766 -40.51217 -39.32360 -38.40637 -37.37544 -37.16259 -35.15777 -33.05287 -31.81910 -31.12979 -31.06391 -27.65679 -26.06526 -23.98746 -23.82332 -23.48662 -22.21109 -21.43257 -20.91098 -19.43924 -18.70325 -18.22215 -18.17824 -17.50546 -16.73367 -16.53514 -16.37453 -16.16302 -15.89489 -15.71541 -15.59431 -15.26575 -14.99801 -14.92498 -14.57414 -14.37807 -13.98935 -13.84100 -13.55821 -13.25497 -13.16226 -13.03763 -12.94479 -12.33273 -12.27733 -12.18022 -12.16004 -11.70243 -11.59854 -11.46390 -11.28805 -10.88961 -10.75530 -10.53020 -10.16564 -10.00061 -9.79110 -5.14488 -0.41222 0.08790 1.15555 1.53652 1.78389 1.88785 2.07737 2.59190 3.08627 3.17196 3.35502 3.41044 3.56823 3.60510 3.71594 3.75803 3.89788 3.95902 3.99764 4.19693 4.21883 4.30411 4.31796 4.40737 4.43338 4.50288 4.53934 4.56530 4.59727 4.68090 4.76881 4.89562 4.94387 4.98054 5.04289 5.09366 5.14588 5.18101 5.27869 5.37577 5.42892 5.50883 5.54204 6.43628 6.48343 6.67202 6.70839 7.25468 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.074 4.074 3 Si 0.691 3.309 4 C -0.077 4.077 5 C -0.135 4.135 6 C -0.065 4.065 7 C -0.164 4.164 8 C 0.559 3.441 9 O -0.517 6.517 10 N -0.726 5.726 11 C 0.146 3.854 12 H 0.090 0.910 13 C -0.130 4.130 14 C -0.107 4.107 15 C -0.090 4.090 16 H 0.079 0.921 17 C 0.079 3.921 18 O -0.573 6.573 19 C -0.110 4.110 20 C -0.124 4.124 21 C 0.173 3.827 22 O -0.476 6.476 23 C -0.129 4.129 24 H 0.380 0.620 25 H 0.118 0.882 26 H -0.256 1.256 27 H -0.253 1.253 28 H 0.136 0.864 29 H 0.134 0.866 30 H 0.398 0.602 31 H 0.064 0.936 32 H 0.069 0.931 33 H 0.074 0.926 34 H 0.063 0.937 35 H 0.045 0.955 36 H 0.046 0.954 37 H 0.380 0.620 38 H 0.071 0.929 39 H 0.069 0.931 40 H 0.072 0.928 41 H 0.070 0.930 42 H 0.398 0.602 43 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.253 5.624 4.827 7.516 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.185 4.185 3 Si 0.592 3.408 4 C -0.078 4.078 5 C -0.152 4.152 6 C -0.084 4.084 7 C -0.167 4.167 8 C 0.346 3.654 9 O -0.393 6.393 10 N -0.378 5.378 11 C 0.042 3.958 12 H 0.108 0.892 13 C -0.168 4.168 14 C -0.145 4.145 15 C -0.108 4.108 16 H 0.097 0.903 17 C 0.001 3.999 18 O -0.379 6.379 19 C -0.148 4.148 20 C -0.162 4.162 21 C 0.126 3.874 22 O -0.287 6.287 23 C -0.148 4.148 24 H 0.227 0.773 25 H 0.135 0.865 26 H -0.180 1.180 27 H -0.178 1.178 28 H 0.153 0.847 29 H 0.152 0.848 30 H 0.233 0.767 31 H 0.082 0.918 32 H 0.088 0.912 33 H 0.092 0.908 34 H 0.082 0.918 35 H 0.064 0.936 36 H 0.064 0.936 37 H 0.227 0.773 38 H 0.090 0.910 39 H 0.087 0.913 40 H 0.091 0.909 41 H 0.089 0.911 42 H 0.257 0.743 43 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges -0.431 5.229 3.090 6.089 hybrid contribution -0.096 -0.375 0.567 0.686 sum -0.527 4.854 3.657 6.100 Atomic orbital electron populations 1.86540 1.16699 1.81686 1.49251 1.25187 0.85536 1.10468 0.97277 0.94785 0.81111 0.77453 0.87458 1.20438 0.96814 0.94207 0.96307 1.20923 1.00104 0.99800 0.94391 1.21154 0.97343 0.92614 0.97284 1.20448 1.05469 0.94372 0.96458 1.18043 0.78179 0.86702 0.82496 1.90836 1.56685 1.14484 1.77276 1.46011 1.56902 1.13181 1.21698 1.21035 0.96051 0.95003 0.83690 0.89197 1.21934 0.96059 1.00249 0.98604 1.21478 1.01860 0.97481 0.93726 1.21201 0.96791 0.98048 0.94786 0.90290 1.22229 0.83995 0.96813 0.96890 1.86475 1.31575 1.76604 1.43242 1.21467 0.96173 0.99914 0.97221 1.21788 1.01989 0.97907 0.94557 1.18512 0.93729 0.83487 0.91685 1.84760 1.46233 1.17955 1.79794 1.21349 1.01015 0.93899 0.98503 0.77253 0.86491 1.18035 1.17759 0.84691 0.84809 0.76715 0.91751 0.91227 0.90776 0.91828 0.93627 0.93552 0.77268 0.91037 0.91255 0.90894 0.91137 0.74343 0.84232 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.40 12.83 -35.23 -0.45 -0.05 16 2 C -0.07 0.09 2.79 36.00 0.10 0.19 16 3 Si 0.69 -1.51 29.78 -169.99 -5.06 -6.57 16 4 C -0.08 0.06 5.35 -104.58 -0.56 -0.50 16 5 C -0.13 0.27 8.64 -39.63 -0.34 -0.07 16 6 C -0.07 0.11 9.54 -39.20 -0.37 -0.26 16 7 C -0.16 -0.19 5.89 -104.85 -0.62 -0.81 16 8 C 0.56 1.44 7.73 -12.47 -0.10 1.35 16 9 O -0.52 -3.24 14.82 -16.59 -0.25 -3.48 16 10 N -0.73 0.30 5.03 -54.84 -0.28 0.03 16 11 C 0.15 -0.02 2.45 -67.93 -0.17 -0.18 16 12 H 0.09 0.16 7.58 -51.93 -0.39 -0.24 16 13 C -0.13 -0.11 5.49 -26.73 -0.15 -0.26 16 14 C -0.11 -0.07 5.10 -26.73 -0.14 -0.21 16 15 C -0.09 0.05 2.43 -90.62 -0.22 -0.17 16 16 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 17 C 0.08 -0.06 6.43 37.16 0.24 0.18 16 18 O -0.57 -0.41 13.19 -35.23 -0.46 -0.88 16 19 C -0.11 0.23 5.20 -26.70 -0.14 0.09 16 20 C -0.12 0.29 5.40 -26.70 -0.14 0.14 16 21 C 0.17 0.35 6.72 -38.70 -0.26 0.09 16 22 O -0.48 -1.44 11.58 -40.52 -0.47 -1.91 16 23 C -0.13 -0.10 9.60 -39.47 -0.38 -0.48 16 24 H 0.38 -1.83 8.70 45.56 0.40 -1.43 16 25 H 0.12 -0.06 7.96 -51.93 -0.41 -0.48 16 26 H -0.26 -0.04 7.11 56.52 0.40 0.36 16 27 H -0.25 -0.33 7.11 56.52 0.40 0.07 16 28 H 0.14 -0.59 4.87 -52.49 -0.26 -0.84 16 29 H 0.13 -0.63 6.40 -52.49 -0.34 -0.97 16 30 H 0.40 -1.28 6.63 -40.82 -0.27 -1.55 16 31 H 0.06 0.03 8.14 -51.93 -0.42 -0.39 16 32 H 0.07 0.22 8.14 -51.93 -0.42 -0.20 16 33 H 0.07 0.15 7.82 -51.93 -0.41 -0.26 16 34 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 35 H 0.05 -0.08 8.14 -51.93 -0.42 -0.50 16 36 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 37 H 0.38 -1.27 9.12 45.56 0.42 -0.85 16 38 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 39 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 40 H 0.07 -0.20 8.14 -51.93 -0.42 -0.63 16 41 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 42 H 0.40 -0.30 9.06 45.56 0.41 0.11 16 43 H 0.14 0.08 8.06 -52.48 -0.42 -0.35 16 LS Contribution 347.84 15.07 5.24 5.24 Total: 0.00 -10.06 347.84 -9.67 -19.73 By element: Atomic # 1 Polarization: -6.50 SS G_CDS: -4.70 Total: -11.19 kcal Atomic # 6 Polarization: 2.33 SS G_CDS: -3.24 Total: -0.92 kcal Atomic # 7 Polarization: 0.30 SS G_CDS: -0.28 Total: 0.03 kcal Atomic # 8 Polarization: -4.69 SS G_CDS: -1.63 Total: -6.32 kcal Atomic # 14 Polarization: -1.51 SS G_CDS: -5.06 Total: -6.57 kcal Total LS contribution 5.24 Total: 5.24 kcal Total: -10.06 -9.67 -19.73 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207542_13422076.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -122.827 kcal (2) G-P(sol) polarization free energy of solvation -10.063 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -132.891 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.669 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.733 kcal (6) G-S(sol) free energy of system = (1) + (5) -142.560 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds