Wall clock time and date at job start Tue Mar 9 2021 12:55:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86303 * 109.46926 * 2 1 4 4 C 1.50695 * 109.47084 * 119.99579 * 2 1 3 5 5 C 1.38501 * 119.80688 * 244.98026 * 4 2 1 6 6 C 1.37837 * 120.29836 * 179.76983 * 5 4 2 7 7 C 1.39663 * 119.90672 * 0.50954 * 6 5 4 8 8 C 1.47536 * 120.18921 * 179.77034 * 7 6 5 9 9 O 1.21590 * 119.99924 * 179.72122 * 8 7 6 10 10 N 1.34780 * 120.00155 * 359.72703 * 8 7 6 11 11 C 1.46506 * 120.00088 * 180.02562 * 10 8 7 12 12 H 1.09000 * 109.46872 * 324.99405 * 11 10 8 13 13 C 1.52997 * 109.47277 * 84.99368 * 11 10 8 14 14 C 1.52996 * 109.47165 * 180.02562 * 13 11 10 15 15 C 1.53002 * 109.46972 * 300.00293 * 14 13 11 16 16 H 1.09000 * 109.46986 * 299.99742 * 15 14 13 17 17 C 1.52996 * 109.47346 * 179.97438 * 15 14 13 18 18 O 1.42903 * 109.47094 * 64.99836 * 17 15 14 19 19 C 1.52997 * 109.47415 * 59.99860 * 15 14 13 20 20 C 1.52999 * 109.46691 * 204.99775 * 11 10 8 21 21 C 1.40176 * 119.62082 * 359.49272 * 7 6 5 22 22 O 1.35649 * 120.14960 * 180.23039 * 21 7 6 23 23 C 1.38101 * 119.80397 * 65.00565 * 4 2 1 24 24 H 0.96697 * 114.00213 * 299.99691 * 1 2 3 25 25 H 1.09000 * 109.47363 * 239.99971 * 2 1 3 26 26 H 1.48497 * 110.00286 * 178.67874 * 3 2 1 27 27 H 1.48506 * 109.99789 * 300.00200 * 3 2 1 28 28 H 1.07997 * 119.84734 * 0.02562 * 5 4 2 29 29 H 1.08000 * 120.04767 * 180.25898 * 6 5 4 30 30 H 0.97000 * 119.99750 * 359.97438 * 10 8 7 31 31 H 1.09000 * 109.47140 * 60.00200 * 13 11 10 32 32 H 1.09001 * 109.47375 * 300.00183 * 13 11 10 33 33 H 1.08992 * 109.47534 * 180.02562 * 14 13 11 34 34 H 1.08996 * 109.47134 * 59.99508 * 14 13 11 35 35 H 1.08998 * 109.47622 * 184.99440 * 17 15 14 36 36 H 1.09001 * 109.47244 * 305.00138 * 17 15 14 37 37 H 0.96699 * 114.00071 * 180.02562 * 18 17 15 38 38 H 1.09001 * 109.46922 * 180.02562 * 19 15 14 39 39 H 1.09000 * 109.47140 * 59.99976 * 19 15 14 40 40 H 1.08993 * 109.47839 * 59.99891 * 20 11 10 41 41 H 1.09000 * 109.47160 * 299.99453 * 20 11 10 42 42 H 0.96698 * 113.99812 * 90.00910 * 22 21 7 43 43 H 1.08003 * 119.95492 * 359.95794 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 2.6400 -0.0069 2.1903 6 6 3.1000 -0.6455 3.3219 7 6 2.8603 -2.0101 3.4976 8 6 3.3543 -2.7009 4.7040 9 8 3.1393 -3.8879 4.8558 10 7 4.0438 -2.0161 5.6379 11 6 4.5348 -2.7022 6.8357 12 1 3.8185 -3.4671 7.1355 13 6 5.8834 -3.3576 6.5313 14 6 6.3958 -4.0746 7.7819 15 6 6.5652 -3.0624 8.9167 16 1 7.2816 -2.2974 8.6173 17 6 7.0770 -3.7794 10.1676 18 8 8.3875 -4.2925 9.9199 19 6 5.2166 -2.4070 9.2211 20 6 4.7043 -1.6895 7.9700 21 6 2.1427 -2.7184 2.5238 22 8 1.8997 -4.0431 2.6858 23 6 1.6827 -2.0589 1.3941 24 1 -0.3933 0.4416 0.7650 25 1 1.7924 -0.5138 -0.8900 26 1 3.5345 1.7705 0.0322 27 1 1.5613 2.4679 -1.2085 28 1 2.8294 1.0474 2.0534 29 1 3.6486 -0.0922 4.0698 30 1 4.2156 -1.0692 5.5167 31 1 6.5997 -2.5926 6.2315 32 1 5.7626 -4.0790 5.7231 33 1 7.3567 -4.5411 7.5653 34 1 5.6794 -4.8395 8.0814 35 1 7.1134 -3.0767 11.0000 36 1 6.4058 -4.6018 10.4153 37 1 8.7751 -4.7610 10.6718 38 1 5.3375 -1.6856 10.0293 39 1 4.5002 -3.1720 9.5205 40 1 3.7436 -1.2226 8.1869 41 1 5.4206 -0.9246 7.6702 42 1 1.0745 -4.2376 3.1509 43 1 1.1291 -2.6004 0.6413 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7207542_13422076.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:55:42 Heat of formation + Delta-G solvation = -147.385892 kcal Electronic energy + Delta-G solvation = -25464.757680 eV Core-core repulsion = 21668.809733 eV Total energy + Delta-G solvation = -3795.947947 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -41.74321 -40.51220 -39.36548 -38.44604 -37.39084 -37.14013 -35.24686 -33.03872 -31.79306 -31.11681 -31.05101 -27.63133 -26.03163 -23.95013 -23.81758 -23.46649 -22.19011 -21.52237 -20.88602 -19.46649 -18.72458 -18.19468 -18.14282 -17.54028 -16.76354 -16.52031 -16.36984 -16.17461 -15.87153 -15.68842 -15.64442 -15.27689 -15.02882 -14.82703 -14.54815 -14.43632 -13.96317 -13.83610 -13.55363 -13.23311 -13.14781 -12.99797 -12.89844 -12.31417 -12.29018 -12.17898 -12.12319 -11.71661 -11.55724 -11.43695 -11.29435 -10.90466 -10.81381 -10.48195 -10.22632 -10.00672 -9.78266 -4.98905 -0.42130 0.13784 1.28403 1.65193 1.72508 2.00283 2.04347 2.57485 3.10863 3.30947 3.44147 3.53604 3.62113 3.68673 3.77101 3.79567 3.95869 4.01992 4.09097 4.26931 4.30294 4.34359 4.37100 4.41257 4.49410 4.52327 4.59157 4.61550 4.71477 4.75821 4.84089 4.95146 5.02144 5.05346 5.08967 5.14633 5.15312 5.21634 5.23482 5.37378 5.43011 5.50845 5.59492 6.49089 6.69559 6.75264 6.89014 7.17927 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.554 6.554 2 C -0.086 4.086 3 Si 0.793 3.207 4 C -0.074 4.074 5 C -0.129 4.129 6 C -0.052 4.052 7 C -0.180 4.180 8 C 0.554 3.446 9 O -0.565 6.565 10 N -0.709 5.709 11 C 0.149 3.851 12 H 0.067 0.933 13 C -0.124 4.124 14 C -0.104 4.104 15 C -0.087 4.087 16 H 0.075 0.925 17 C 0.075 3.925 18 O -0.597 6.597 19 C -0.107 4.107 20 C -0.116 4.116 21 C 0.150 3.850 22 O -0.500 6.500 23 C -0.141 4.141 24 H 0.398 0.602 25 H 0.106 0.894 26 H -0.279 1.279 27 H -0.303 1.303 28 H 0.167 0.833 29 H 0.171 0.829 30 H 0.414 0.586 31 H 0.072 0.928 32 H 0.038 0.962 33 H 0.056 0.944 34 H 0.055 0.945 35 H 0.061 0.939 36 H 0.049 0.951 37 H 0.395 0.605 38 H 0.088 0.912 39 H 0.066 0.934 40 H 0.086 0.914 41 H 0.086 0.914 42 H 0.407 0.593 43 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.949 8.369 6.016 10.350 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.362 6.362 2 C -0.194 4.194 3 Si 0.698 3.302 4 C -0.075 4.075 5 C -0.146 4.146 6 C -0.071 4.071 7 C -0.184 4.184 8 C 0.342 3.658 9 O -0.445 6.445 10 N -0.362 5.362 11 C 0.044 3.956 12 H 0.085 0.915 13 C -0.163 4.163 14 C -0.142 4.142 15 C -0.105 4.105 16 H 0.094 0.906 17 C -0.003 4.003 18 O -0.406 6.406 19 C -0.145 4.145 20 C -0.154 4.154 21 C 0.104 3.896 22 O -0.313 6.313 23 C -0.160 4.160 24 H 0.248 0.752 25 H 0.123 0.877 26 H -0.206 1.206 27 H -0.232 1.232 28 H 0.183 0.817 29 H 0.188 0.812 30 H 0.253 0.747 31 H 0.091 0.909 32 H 0.056 0.944 33 H 0.075 0.925 34 H 0.074 0.926 35 H 0.079 0.921 36 H 0.067 0.933 37 H 0.245 0.755 38 H 0.107 0.893 39 H 0.085 0.915 40 H 0.104 0.896 41 H 0.104 0.896 42 H 0.267 0.733 43 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -0.130 7.987 4.326 9.085 hybrid contribution -0.197 -1.245 0.134 1.267 sum -0.327 6.743 4.459 8.091 Atomic orbital electron populations 1.86503 1.16912 1.82252 1.50578 1.25433 0.85601 1.11740 0.96669 0.93688 0.77824 0.73793 0.84907 1.20577 0.96571 0.93561 0.96753 1.21241 0.98775 1.01087 0.93494 1.21524 0.96297 0.91279 0.97967 1.20471 1.06292 0.95676 0.95918 1.18358 0.77973 0.86286 0.83140 1.90808 1.58720 1.16593 1.78344 1.45878 1.55606 1.13841 1.20847 1.20987 0.94590 0.95419 0.84585 0.91484 1.21858 0.97025 0.99744 0.97675 1.21414 1.00570 0.97813 0.94426 1.21190 0.97700 0.97446 0.94201 0.90629 1.22324 0.83517 0.97246 0.97174 1.86435 1.32325 1.77040 1.44750 1.21468 0.95018 1.00173 0.97826 1.21761 1.03165 0.97307 0.93175 1.18774 0.94881 0.83251 0.92687 1.84715 1.47157 1.19216 1.80165 1.21337 1.01737 0.94773 0.98162 0.75214 0.87680 1.20558 1.23163 0.81652 0.81201 0.74719 0.90939 0.94351 0.92546 0.92622 0.92116 0.93313 0.75545 0.89322 0.91503 0.89551 0.89564 0.73329 0.85010 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.91 12.83 -148.98 -1.91 -1.00 16 2 C -0.09 0.22 2.79 71.23 0.20 0.42 16 3 Si 0.79 -4.51 29.78 68.60 2.04 -2.47 16 4 C -0.07 0.14 5.35 -19.84 -0.11 0.03 16 5 C -0.13 0.79 8.64 22.24 0.19 0.98 16 6 C -0.05 0.28 9.54 22.52 0.21 0.49 16 7 C -0.18 -0.49 5.89 -20.01 -0.12 -0.61 16 8 C 0.55 3.48 7.73 86.69 0.67 4.15 16 9 O -0.57 -8.65 14.82 16.92 0.25 -8.39 16 10 N -0.71 0.82 5.03 -445.69 -2.24 -1.42 16 11 C 0.15 0.01 2.45 44.99 0.11 0.12 16 12 H 0.07 0.35 7.58 -2.39 -0.02 0.33 16 13 C -0.12 -0.38 5.49 30.59 0.17 -0.21 16 14 C -0.10 -0.29 5.10 30.59 0.16 -0.13 16 15 C -0.09 0.12 2.43 -10.80 -0.03 0.10 16 16 H 0.08 -0.03 8.14 -2.39 -0.02 -0.05 16 17 C 0.07 -0.13 6.43 71.98 0.46 0.33 16 18 O -0.60 -0.99 13.19 -148.98 -1.97 -2.96 16 19 C -0.11 0.57 5.20 30.61 0.16 0.73 16 20 C -0.12 0.73 5.40 30.61 0.17 0.89 16 21 C 0.15 0.87 6.72 22.84 0.15 1.02 16 22 O -0.50 -4.54 11.58 -68.72 -0.80 -5.33 16 23 C -0.14 -0.39 9.60 22.34 0.21 -0.18 16 24 H 0.40 -4.16 8.70 -74.06 -0.64 -4.81 16 25 H 0.11 -0.05 7.96 -2.39 -0.02 -0.07 16 26 H -0.28 0.45 7.11 99.48 0.71 1.15 16 27 H -0.30 -0.87 7.11 99.48 0.71 -0.17 16 28 H 0.17 -2.05 4.87 -2.91 -0.01 -2.06 16 29 H 0.17 -2.23 6.40 -2.91 -0.02 -2.25 16 30 H 0.41 -3.53 6.63 -92.71 -0.61 -4.15 16 31 H 0.07 0.09 8.14 -2.39 -0.02 0.07 16 32 H 0.04 0.36 8.14 -2.39 -0.02 0.34 16 33 H 0.06 0.35 7.82 -2.39 -0.02 0.33 16 34 H 0.05 0.22 8.14 -2.39 -0.02 0.21 16 35 H 0.06 -0.29 8.14 -2.39 -0.02 -0.31 16 36 H 0.05 -0.12 8.14 -2.39 -0.02 -0.14 16 37 H 0.40 -2.57 9.12 -74.06 -0.68 -3.25 16 38 H 0.09 -0.71 8.14 -2.39 -0.02 -0.73 16 39 H 0.07 -0.30 8.14 -2.39 -0.02 -0.32 16 40 H 0.09 -0.70 8.14 -2.39 -0.02 -0.72 16 41 H 0.09 -0.75 8.14 -2.39 -0.02 -0.77 16 42 H 0.41 0.78 9.06 -74.06 -0.67 0.11 16 43 H 0.13 0.45 8.06 -2.91 -0.02 0.43 16 Total: 0.00 -26.76 347.84 -3.50 -30.26 By element: Atomic # 1 Polarization: -15.33 SS G_CDS: -1.50 Total: -16.83 kcal Atomic # 6 Polarization: 5.52 SS G_CDS: 2.62 Total: 8.13 kcal Atomic # 7 Polarization: 0.82 SS G_CDS: -2.24 Total: -1.42 kcal Atomic # 8 Polarization: -13.26 SS G_CDS: -4.42 Total: -17.68 kcal Atomic # 14 Polarization: -4.51 SS G_CDS: 2.04 Total: -2.47 kcal Total: -26.76 -3.50 -30.26 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207542_13422076.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -117.127 kcal (2) G-P(sol) polarization free energy of solvation -26.757 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -143.883 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.502 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.259 kcal (6) G-S(sol) free energy of system = (1) + (5) -147.386 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds