Wall clock time and date at job start Tue Mar 9 2021 12:55:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86297 * 109.47493 * 2 1 4 4 C 1.50706 * 109.47206 * 119.99978 * 2 1 3 5 5 C 1.32689 * 124.68365 * 64.99816 * 4 2 1 6 6 C 1.44513 * 113.09798 * 179.70865 * 5 4 2 7 7 C 1.47047 * 123.48984 * 180.24488 * 6 5 4 8 8 O 1.21655 * 119.99258 * 180.02562 * 7 6 5 9 9 N 1.34774 * 120.00131 * 0.02562 * 7 6 5 10 10 C 1.46501 * 119.99584 * 179.97438 * 9 7 6 11 11 H 1.08998 * 109.47195 * 35.00407 * 10 9 7 12 12 C 1.53002 * 109.46630 * 154.99951 * 10 9 7 13 13 C 1.52999 * 109.47023 * 180.02562 * 12 10 9 14 14 C 1.53005 * 109.47007 * 299.99961 * 13 12 10 15 15 H 1.09010 * 109.47012 * 300.00003 * 14 13 12 16 16 C 1.52999 * 109.47380 * 180.02562 * 14 13 12 17 17 O 1.42899 * 109.47493 * 174.99699 * 16 14 13 18 18 C 1.52993 * 109.47207 * 59.99723 * 14 13 12 19 19 C 1.52992 * 109.47155 * 274.99771 * 10 9 7 20 20 C 1.36224 * 113.01349 * 0.26979 * 6 5 4 21 21 Cl 1.73599 * 124.60070 * 180.02562 * 20 6 5 22 22 S 1.70443 * 110.79128 * 359.97438 * 20 6 5 23 23 H 0.96696 * 113.99846 * 299.99562 * 1 2 3 24 24 H 1.09000 * 109.47253 * 239.99742 * 2 1 3 25 25 H 1.48498 * 110.00423 * 178.68013 * 3 2 1 26 26 H 1.48503 * 110.00096 * 300.00362 * 3 2 1 27 27 H 1.08002 * 123.45421 * 359.97438 * 5 4 2 28 28 H 0.96992 * 119.99956 * 359.97438 * 9 7 6 29 29 H 1.09007 * 109.47002 * 299.99775 * 12 10 9 30 30 H 1.08998 * 109.47682 * 60.00131 * 12 10 9 31 31 H 1.08999 * 109.47663 * 59.99668 * 13 12 10 32 32 H 1.08998 * 109.47572 * 180.02562 * 13 12 10 33 33 H 1.09000 * 109.47042 * 294.99984 * 16 14 13 34 34 H 1.09000 * 109.47192 * 55.00054 * 16 14 13 35 35 H 0.96693 * 114.00663 * 179.97438 * 17 16 14 36 36 H 1.09004 * 109.47226 * 60.00540 * 18 14 13 37 37 H 1.08997 * 109.47489 * 180.02562 * 18 14 13 38 38 H 1.09004 * 109.47505 * 299.99952 * 19 10 9 39 39 H 1.08993 * 109.47531 * 60.00441 * 19 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.7482 -1.9996 1.4857 6 6 2.3416 -2.4202 2.7345 7 6 2.2805 -3.8006 3.2376 8 8 2.8025 -4.0846 4.2991 9 7 1.6463 -4.7509 2.5228 10 6 1.5859 -6.1262 3.0238 11 1 1.5053 -6.1137 4.1108 12 6 0.3653 -6.8322 2.4300 13 6 0.3019 -8.2683 2.9537 14 6 1.5725 -9.0166 2.5456 15 1 1.6533 -9.0295 1.4586 16 6 1.5089 -10.4530 3.0688 17 8 2.6390 -11.1849 2.5900 18 6 2.7931 -8.3106 3.1393 19 6 2.8565 -6.8741 2.6152 20 6 2.9628 -1.4052 3.3975 21 17 3.7736 -1.5749 4.9231 22 16 2.8372 0.0536 2.5249 23 1 -0.3933 0.4416 0.7651 24 1 1.7923 -0.5139 -0.8899 25 1 3.5346 1.7702 0.0321 26 1 1.5615 2.4679 -1.2085 27 1 1.2144 -2.6673 0.8256 28 1 1.2298 -4.5242 1.6766 29 1 -0.5400 -6.2993 2.7212 30 1 0.4458 -6.8447 1.3431 31 1 0.2211 -8.2556 4.0406 32 1 -0.5674 -8.7715 2.5304 33 1 1.5174 -10.4434 4.1587 34 1 0.5930 -10.9276 2.7167 35 1 2.6643 -12.1058 2.8835 36 1 2.7124 -8.2978 4.2263 37 1 3.6984 -8.8434 2.8482 38 1 2.9371 -6.8866 1.5282 39 1 3.7261 -6.3712 3.0382 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207542_13431040.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:55:59 Heat of formation + Delta-G solvation = -101.121707 kcal Electronic energy + Delta-G solvation = -23933.336873 eV Core-core repulsion = 20187.429738 eV Total energy + Delta-G solvation = -3745.907135 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.068 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -41.23282 -39.82781 -38.86429 -37.93021 -37.39587 -36.95715 -35.12445 -31.89295 -31.77846 -31.20897 -27.11642 -26.72381 -25.00515 -23.80358 -22.35347 -21.95750 -21.09280 -20.46235 -19.38841 -18.29573 -18.10338 -17.83969 -16.95316 -16.58955 -16.29324 -16.01592 -15.84353 -15.74777 -15.46290 -15.13134 -14.81184 -14.60234 -14.37724 -14.24158 -14.10690 -13.96805 -13.46002 -13.16177 -13.06404 -12.94011 -12.54676 -12.38591 -12.25013 -12.15888 -12.06254 -11.92172 -11.59853 -11.44317 -11.26693 -10.88066 -10.81586 -10.61936 -10.04672 -9.90291 -9.66745 -5.31505 -0.58964 -0.20269 0.43274 0.70465 1.03080 1.10320 1.44887 1.76728 2.19700 2.31709 3.14229 3.18987 3.39623 3.58865 3.75386 3.81990 3.87372 3.95230 3.98248 4.21920 4.24051 4.33428 4.36357 4.43678 4.45667 4.52238 4.58539 4.61303 4.67700 4.78972 4.89307 4.92164 5.01799 5.08367 5.13855 5.28334 5.39045 5.44512 5.55418 6.31189 6.49956 6.68244 7.25555 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.024 4.024 3 Si 0.651 3.349 4 C -0.236 4.236 5 C -0.070 4.070 6 C -0.159 4.159 7 C 0.576 3.424 8 O -0.517 6.517 9 N -0.721 5.721 10 C 0.147 3.853 11 H 0.091 0.909 12 C -0.125 4.125 13 C -0.109 4.109 14 C -0.090 4.090 15 H 0.079 0.921 16 C 0.079 3.921 17 O -0.573 6.573 18 C -0.107 4.107 19 C -0.129 4.129 20 C -0.114 4.114 21 Cl 0.027 6.973 22 S 0.234 5.766 23 H 0.382 0.618 24 H 0.128 0.872 25 H -0.235 1.235 26 H -0.229 1.229 27 H 0.157 0.843 28 H 0.399 0.601 29 H 0.073 0.927 30 H 0.070 0.930 31 H 0.069 0.931 32 H 0.071 0.929 33 H 0.046 0.954 34 H 0.045 0.955 35 H 0.380 0.620 36 H 0.063 0.937 37 H 0.073 0.927 38 H 0.064 0.936 39 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.813 1.152 -1.570 4.281 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.338 6.338 2 C -0.138 4.138 3 Si 0.550 3.450 4 C -0.353 4.353 5 C -0.099 4.099 6 C -0.178 4.178 7 C 0.361 3.639 8 O -0.394 6.394 9 N -0.373 5.373 10 C 0.043 3.957 11 H 0.109 0.891 12 C -0.163 4.163 13 C -0.148 4.148 14 C -0.108 4.108 15 H 0.097 0.903 16 C 0.001 3.999 17 O -0.379 6.379 18 C -0.145 4.145 19 C -0.168 4.168 20 C -0.261 4.261 21 Cl 0.056 6.944 22 S 0.499 5.501 23 H 0.230 0.770 24 H 0.145 0.855 25 H -0.158 1.158 26 H -0.152 1.152 27 H 0.174 0.826 28 H 0.233 0.767 29 H 0.091 0.909 30 H 0.088 0.912 31 H 0.087 0.913 32 H 0.089 0.911 33 H 0.064 0.936 34 H 0.064 0.936 35 H 0.227 0.773 36 H 0.082 0.918 37 H 0.092 0.908 38 H 0.082 0.918 39 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges -2.144 3.275 -1.649 4.247 hybrid contribution -0.697 -2.551 -0.335 2.666 sum -2.841 0.724 -1.984 3.540 Atomic orbital electron populations 1.86538 1.16341 1.81655 1.49263 1.24433 0.85364 1.09148 0.94829 0.95085 0.82404 0.77254 0.90223 1.24792 1.09016 0.98736 1.02796 1.21005 0.98989 0.95019 0.94933 1.20260 1.05732 0.94890 0.96931 1.17395 0.78665 0.83633 0.84188 1.90878 1.44988 1.81836 1.21682 1.45909 1.57376 1.09081 1.24891 1.21041 0.95065 0.79559 1.00069 0.89109 1.21778 0.97507 0.95877 1.01090 1.21456 0.97242 0.94431 1.01628 1.21202 0.95445 0.92756 1.01420 0.90308 1.22228 0.88121 0.92125 0.97450 1.86471 1.46822 1.27640 1.76965 1.21486 0.98307 0.94368 1.00364 1.21940 0.97942 0.95664 1.01239 1.25522 1.03798 1.00461 0.96307 1.98442 1.75459 1.97274 1.23243 1.83269 1.50832 1.06298 1.09685 0.76972 0.85504 1.15848 1.15153 0.82603 0.76652 0.90878 0.91152 0.91250 0.91051 0.93553 0.93632 0.77281 0.91822 0.90803 0.91762 0.91224 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 1.06 12.88 -35.23 -0.45 0.60 16 2 C -0.02 0.06 2.94 36.01 0.11 0.16 16 3 Si 0.65 -1.61 30.92 -169.99 -5.26 -6.86 16 4 C -0.24 0.35 5.65 -36.19 -0.20 0.14 16 5 C -0.07 0.07 9.75 -39.00 -0.38 -0.31 16 6 C -0.16 -0.25 5.98 -104.58 -0.63 -0.87 16 7 C 0.58 1.70 7.75 -12.69 -0.10 1.60 16 8 O -0.52 -3.26 14.57 5.23 0.08 -3.19 16 9 N -0.72 -0.08 5.06 -55.00 -0.28 -0.36 16 10 C 0.15 0.03 2.45 -67.93 -0.17 -0.13 16 11 H 0.09 0.19 7.58 -51.93 -0.39 -0.20 16 12 C -0.12 0.22 5.39 -26.73 -0.14 0.08 16 13 C -0.11 0.18 5.20 -26.73 -0.14 0.04 16 14 C -0.09 0.03 2.43 -90.62 -0.22 -0.19 16 15 H 0.08 0.03 8.14 -51.92 -0.42 -0.39 16 16 C 0.08 -0.04 6.43 37.16 0.24 0.20 16 17 O -0.57 -0.50 13.20 -35.23 -0.46 -0.96 16 18 C -0.11 -0.08 5.10 -26.71 -0.14 -0.22 16 19 C -0.13 -0.12 5.50 -26.71 -0.15 -0.27 16 20 C -0.11 -0.22 6.87 30.01 0.21 -0.01 16 21 Cl 0.03 0.09 27.20 -51.86 -1.41 -1.32 16 22 S 0.23 -0.22 20.19 -107.50 -2.17 -2.39 16 23 H 0.38 -2.13 8.70 45.56 0.40 -1.74 16 24 H 0.13 -0.31 7.96 -51.93 -0.41 -0.72 16 25 H -0.23 0.08 7.11 56.52 0.40 0.48 16 26 H -0.23 -0.06 7.11 56.52 0.40 0.34 16 27 H 0.16 -0.46 7.10 -52.49 -0.37 -0.83 16 28 H 0.40 -0.95 7.15 -40.82 -0.29 -1.24 16 29 H 0.07 -0.15 8.14 -51.92 -0.42 -0.57 16 30 H 0.07 -0.16 8.14 -51.93 -0.42 -0.59 16 31 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 32 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 33 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 34 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 35 H 0.38 -1.21 9.12 45.56 0.42 -0.80 16 36 H 0.06 0.07 8.14 -51.93 -0.42 -0.35 16 37 H 0.07 0.15 7.82 -51.93 -0.41 -0.25 16 38 H 0.06 0.04 8.14 -51.93 -0.42 -0.38 16 39 H 0.07 0.21 8.14 -51.93 -0.42 -0.21 16 LS Contribution 346.52 15.07 5.22 5.22 Total: 0.00 -7.64 346.52 -10.94 -18.58 By element: Atomic # 1 Polarization: -5.06 SS G_CDS: -4.49 Total: -9.55 kcal Atomic # 6 Polarization: 1.93 SS G_CDS: -1.71 Total: 0.22 kcal Atomic # 7 Polarization: -0.08 SS G_CDS: -0.28 Total: -0.36 kcal Atomic # 8 Polarization: -2.70 SS G_CDS: -0.84 Total: -3.54 kcal Atomic # 14 Polarization: -1.61 SS G_CDS: -5.26 Total: -6.86 kcal Atomic # 16 Polarization: -0.22 SS G_CDS: -2.17 Total: -2.39 kcal Atomic # 17 Polarization: 0.09 SS G_CDS: -1.41 Total: -1.32 kcal Total LS contribution 5.22 Total: 5.22 kcal Total: -7.64 -10.94 -18.58 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207542_13431040.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -82.545 kcal (2) G-P(sol) polarization free energy of solvation -7.641 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -90.185 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.936 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.577 kcal (6) G-S(sol) free energy of system = (1) + (5) -101.122 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds