Wall clock time and date at job start Tue Mar 9 2021 12:57:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86303 * 109.47284 * 2 1 4 4 C 1.50702 * 109.46932 * 240.00085 * 2 1 3 5 5 C 1.38242 * 119.94553 * 120.02294 * 4 2 1 6 6 C 1.38167 * 120.05854 * 179.72104 * 5 4 2 7 7 C 1.38708 * 119.93975 * 0.48871 * 6 5 4 8 8 O 1.35900 * 120.05600 * 179.78687 * 7 6 5 9 9 C 1.42896 * 116.99953 * 359.72306 * 8 7 6 10 10 C 1.50700 * 109.47293 * 179.97438 * 9 8 7 11 11 O 1.21279 * 120.00113 * 0.02562 * 10 9 8 12 12 N 1.34784 * 119.99961 * 179.97438 * 10 9 8 13 13 C 1.46494 * 119.99635 * 180.02562 * 12 10 9 14 14 H 1.08997 * 109.47706 * 34.99696 * 13 12 10 15 15 C 1.53004 * 109.46982 * 155.00372 * 13 12 10 16 16 C 1.53000 * 109.47072 * 180.02562 * 15 13 12 17 17 C 1.53005 * 109.46950 * 299.99353 * 16 15 13 18 18 H 1.09003 * 109.47189 * 300.00626 * 17 16 15 19 19 C 1.52992 * 109.46929 * 180.02562 * 17 16 15 20 20 O 1.42902 * 109.47085 * 174.99906 * 19 17 16 21 21 C 1.52995 * 109.46863 * 60.00428 * 17 16 15 22 22 C 1.53005 * 109.47118 * 274.99773 * 13 12 10 23 23 C 1.38749 * 119.88985 * 359.51167 * 7 6 5 24 24 N 1.48012 * 120.03022 * 180.27717 * 23 7 6 25 25 O 1.21793 * 119.99837 * 179.97438 * 24 23 7 26 26 O 1.21801 * 119.99452 * 359.97438 * 24 23 7 27 27 C 1.38131 * 119.94635 * 0.25221 * 23 7 6 28 28 H 0.96694 * 114.00476 * 59.99370 * 1 2 3 29 29 H 1.09002 * 109.47197 * 120.00042 * 2 1 3 30 30 H 1.48505 * 109.99891 * 60.00053 * 3 2 1 31 31 H 1.48499 * 110.00022 * 181.32194 * 3 2 1 32 32 H 1.08006 * 119.96998 * 359.97438 * 5 4 2 33 33 H 1.08001 * 120.03171 * 180.25321 * 6 5 4 34 34 H 1.09004 * 109.47379 * 59.99690 * 9 8 7 35 35 H 1.08997 * 109.47194 * 300.00198 * 9 8 7 36 36 H 0.96995 * 120.00015 * 359.72695 * 12 10 9 37 37 H 1.09002 * 109.46770 * 299.99381 * 15 13 12 38 38 H 1.08996 * 109.47170 * 59.99895 * 15 13 12 39 39 H 1.08990 * 109.47431 * 59.99389 * 16 15 13 40 40 H 1.09006 * 109.46868 * 179.97438 * 16 15 13 41 41 H 1.09003 * 109.47633 * 294.99902 * 19 17 16 42 42 H 1.08998 * 109.47393 * 55.00363 * 19 17 16 43 43 H 0.96700 * 114.00220 * 180.02562 * 20 19 17 44 44 H 1.08995 * 109.47831 * 59.99819 * 21 17 16 45 45 H 1.09001 * 109.47451 * 180.02562 * 21 17 16 46 46 H 1.08996 * 109.47503 * 300.00392 * 22 13 12 47 47 H 1.08997 * 109.47041 * 60.00616 * 22 13 12 48 48 H 1.07993 * 119.97138 * 180.02562 * 27 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7264 -0.0376 -2.1395 6 6 3.1929 -0.6883 -3.2655 7 6 2.8545 -2.0149 -3.4886 8 8 3.3085 -2.6559 -4.5976 9 6 4.1253 -1.9009 -5.4946 10 6 4.5319 -2.7703 -6.6564 11 8 4.1586 -3.9229 -6.7111 12 7 5.3096 -2.2666 -7.6353 13 6 5.7044 -3.1117 -8.7649 14 1 4.8912 -3.7953 -9.0090 15 6 6.0118 -2.2310 -9.9777 16 6 6.4235 -3.1136 -11.1577 17 6 7.6698 -3.9179 -10.7825 18 1 8.4833 -3.2346 -10.5385 19 6 8.0819 -4.8000 -11.9627 20 8 9.3101 -5.4628 -11.6559 21 6 7.3625 -4.7986 -9.5698 22 6 6.9509 -3.9155 -8.3894 23 6 2.0564 -2.6879 -2.5748 24 7 1.6984 -4.1053 -2.8066 25 8 0.9982 -4.6957 -2.0038 26 8 2.1042 -4.6811 -3.8003 27 6 1.5965 -2.0343 -1.4481 28 1 -0.3934 0.4417 -0.7649 29 1 1.7923 -0.5138 0.8900 30 1 1.5615 2.4679 1.2085 31 1 3.5346 1.7703 -0.0322 32 1 2.9864 0.9964 -1.9672 33 1 3.8174 -0.1635 -3.9733 34 1 5.0164 -1.5548 -4.9709 35 1 3.5635 -1.0422 -5.8621 36 1 5.6043 -1.3435 -7.5940 37 1 5.1237 -1.6584 -10.2453 38 1 6.8250 -1.5475 -9.7336 39 1 5.6101 -3.7968 -11.4016 40 1 6.6420 -2.4861 -12.0219 41 1 7.3057 -5.5419 -12.1503 42 1 8.2149 -4.1810 -12.8500 43 1 9.6323 -6.0403 -12.3615 44 1 6.5490 -5.4818 -9.8137 45 1 8.2505 -5.3712 -9.3022 46 1 7.7641 -3.2321 -8.1453 47 1 6.7320 -4.5430 -7.5255 48 1 0.9756 -2.5579 -0.7363 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207542_4549638.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:02 Heat of formation + Delta-G solvation = -129.026044 kcal Electronic energy + Delta-G solvation = -33105.336166 eV Core-core repulsion = 28323.630307 eV Total energy + Delta-G solvation = -4781.705858 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.160 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -43.01709 -41.78635 -41.06550 -39.94671 -39.20868 -37.60149 -37.40090 -37.11260 -35.29000 -33.52574 -32.43164 -31.90042 -31.79390 -29.67664 -27.59508 -26.80069 -26.08513 -24.13300 -23.87180 -22.84525 -22.37263 -21.65200 -20.93229 -20.45818 -19.44252 -19.24148 -18.60229 -18.33889 -18.28300 -18.13147 -17.65669 -17.35169 -17.12988 -16.52610 -16.30095 -16.29337 -15.91158 -15.78121 -15.60443 -15.20341 -15.11152 -14.93089 -14.61013 -14.17170 -14.11671 -13.97131 -13.94300 -13.52969 -13.30767 -13.23640 -13.07176 -12.57835 -12.41615 -12.31762 -12.22622 -12.19359 -12.12457 -11.84688 -11.72853 -11.67886 -11.51591 -11.34453 -10.93970 -10.93589 -10.86180 -10.77157 -10.16784 -9.90474 -5.31201 -1.13104 -0.38276 0.38292 0.53657 1.00353 1.09086 1.35512 1.43083 1.74803 1.93391 2.20289 2.98306 3.02108 3.14267 3.20151 3.24832 3.39013 3.51006 3.55195 3.57014 3.61018 3.70228 3.71536 3.87237 3.91107 4.14239 4.15422 4.16481 4.28138 4.30178 4.34866 4.38702 4.42728 4.45500 4.51603 4.55355 4.67208 4.72068 4.84685 4.91916 4.93205 5.00471 5.05992 5.21648 5.28744 5.36407 5.41444 5.46696 5.70994 6.27517 6.32355 6.65437 6.94324 7.05243 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.066 4.066 3 Si 0.692 3.308 4 C -0.158 4.158 5 C -0.025 4.025 6 C -0.209 4.209 7 C 0.200 3.800 8 O -0.253 6.253 9 C 0.030 3.970 10 C 0.513 3.487 11 O -0.495 6.495 12 N -0.725 5.725 13 C 0.147 3.853 14 H 0.092 0.908 15 C -0.124 4.124 16 C -0.110 4.110 17 C -0.090 4.090 18 H 0.079 0.921 19 C 0.078 3.922 20 O -0.574 6.574 21 C -0.108 4.108 22 C -0.130 4.130 23 C -0.075 4.075 24 N 0.028 4.972 25 O -0.177 6.177 26 O -0.118 6.118 27 C 0.009 3.991 28 H 0.381 0.619 29 H 0.121 0.879 30 H -0.248 1.248 31 H -0.254 1.254 32 H 0.149 0.851 33 H 0.156 0.844 34 H 0.101 0.899 35 H 0.102 0.898 36 H 0.400 0.600 37 H 0.073 0.927 38 H 0.071 0.929 39 H 0.069 0.931 40 H 0.071 0.929 41 H 0.047 0.953 42 H 0.045 0.955 43 H 0.381 0.619 44 H 0.064 0.936 45 H 0.074 0.926 46 H 0.064 0.936 47 H 0.070 0.930 48 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.146 10.756 -4.956 12.254 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.176 4.176 3 Si 0.593 3.407 4 C -0.159 4.159 5 C -0.043 4.043 6 C -0.229 4.229 7 C 0.150 3.850 8 O -0.162 6.162 9 C -0.048 4.048 10 C 0.297 3.703 11 O -0.367 6.367 12 N -0.379 5.379 13 C 0.043 3.957 14 H 0.110 0.890 15 C -0.162 4.162 16 C -0.148 4.148 17 C -0.108 4.108 18 H 0.097 0.903 19 C 0.000 4.000 20 O -0.379 6.379 21 C -0.146 4.146 22 C -0.169 4.169 23 C -0.160 4.160 24 N 0.548 4.452 25 O -0.386 6.386 26 O -0.342 6.342 27 C -0.010 4.010 28 H 0.229 0.771 29 H 0.138 0.862 30 H -0.173 1.173 31 H -0.179 1.179 32 H 0.166 0.834 33 H 0.174 0.826 34 H 0.119 0.881 35 H 0.120 0.880 36 H 0.235 0.765 37 H 0.091 0.909 38 H 0.089 0.911 39 H 0.088 0.912 40 H 0.090 0.910 41 H 0.065 0.935 42 H 0.064 0.936 43 H 0.228 0.772 44 H 0.083 0.917 45 H 0.093 0.907 46 H 0.083 0.917 47 H 0.089 0.911 48 H 0.182 0.818 Dipole moment (debyes) X Y Z Total from point charges 3.458 10.972 -3.353 11.983 hybrid contribution 0.341 -0.566 -0.439 0.793 sum 3.800 10.407 -3.792 11.710 Atomic orbital electron populations 1.86559 1.16587 1.81607 1.49339 1.25100 0.85688 1.10254 0.96573 0.94906 0.80691 0.76996 0.88071 1.20313 1.02274 0.93996 0.99362 1.21266 0.91886 0.99803 0.91332 1.21271 1.07018 0.92728 1.01837 1.18697 0.89877 0.90797 0.85626 1.86506 1.62769 1.37500 1.29461 1.22747 0.96283 0.94964 0.90819 1.19810 0.79204 0.88199 0.83106 1.90866 1.52528 1.17054 1.76224 1.45887 1.52785 1.15838 1.23341 1.21089 0.97746 0.92417 0.84447 0.88973 1.21773 1.02065 0.98072 0.94246 1.21463 0.97415 0.98432 0.97534 1.21198 0.97764 0.96973 0.94877 0.90299 1.22225 0.86039 0.94916 0.96772 1.86469 1.40322 1.64598 1.46529 1.21493 1.01970 0.97536 0.93618 1.21950 0.96941 0.98923 0.99066 1.20593 1.10581 0.84033 1.00784 1.43341 0.99189 1.02291 1.00348 1.94555 1.35255 1.66707 1.42040 1.94701 1.54644 1.67579 1.17237 1.20837 0.93493 0.93551 0.93075 0.77131 0.86161 1.17274 1.17927 0.83415 0.82601 0.88125 0.88013 0.76539 0.90869 0.91079 0.91178 0.90983 0.93503 0.93625 0.77225 0.91704 0.90692 0.91683 0.91135 0.81808 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.87 12.77 -35.23 -0.45 0.42 16 2 C -0.07 0.17 2.82 36.01 0.10 0.27 16 3 Si 0.69 -2.64 29.78 -169.99 -5.06 -7.70 16 4 C -0.16 0.33 5.39 -104.60 -0.56 -0.23 16 5 C -0.03 0.10 8.66 -39.61 -0.34 -0.25 16 6 C -0.21 0.70 9.04 -39.43 -0.36 0.35 16 7 C 0.20 0.14 6.67 -39.22 -0.26 -0.12 16 8 O -0.25 -0.56 7.68 -49.78 -0.38 -0.94 16 9 C 0.03 -0.08 5.22 36.01 0.19 0.11 16 10 C 0.51 0.30 7.87 -10.98 -0.09 0.22 16 11 O -0.49 -3.07 16.16 -14.35 -0.23 -3.30 16 12 N -0.72 1.81 5.08 -53.80 -0.27 1.53 16 13 C 0.15 -0.18 2.45 -67.93 -0.17 -0.34 16 14 H 0.09 0.10 7.58 -51.93 -0.39 -0.29 16 15 C -0.12 0.40 5.39 -26.73 -0.14 0.25 16 16 C -0.11 0.29 5.20 -26.73 -0.14 0.15 16 17 C -0.09 0.10 2.43 -90.62 -0.22 -0.12 16 18 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 19 C 0.08 -0.08 6.43 37.15 0.24 0.16 16 20 O -0.57 -0.24 13.20 -35.23 -0.46 -0.70 16 21 C -0.11 -0.01 5.10 -26.71 -0.14 -0.15 16 22 C -0.13 0.02 5.50 -26.70 -0.15 -0.12 16 23 C -0.08 -0.21 6.87 -79.80 -0.55 -0.76 16 24 N 0.03 0.19 4.45 34.03 0.15 0.34 16 25 O -0.18 -1.31 18.45 -29.46 -0.54 -1.85 16 26 O -0.12 -1.03 17.24 -36.49 -0.63 -1.66 16 27 C 0.01 0.00 9.12 -39.60 -0.36 -0.36 16 28 H 0.38 -2.14 8.70 45.56 0.40 -1.75 16 29 H 0.12 -0.25 7.96 -51.93 -0.41 -0.66 16 30 H -0.25 0.01 7.11 56.52 0.40 0.41 16 31 H -0.25 0.50 7.11 56.52 0.40 0.90 16 32 H 0.15 -0.98 4.87 -52.48 -0.26 -1.24 16 33 H 0.16 -1.09 6.30 -52.49 -0.33 -1.42 16 34 H 0.10 -0.56 7.65 -51.93 -0.40 -0.96 16 35 H 0.10 -0.61 7.67 -51.93 -0.40 -1.01 16 36 H 0.40 -2.40 8.60 -40.82 -0.35 -2.75 16 37 H 0.07 -0.27 8.14 -51.93 -0.42 -0.69 16 38 H 0.07 -0.28 8.14 -51.93 -0.42 -0.71 16 39 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 40 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 41 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 42 H 0.05 -0.09 8.14 -51.93 -0.42 -0.52 16 43 H 0.38 -1.35 9.12 45.56 0.42 -0.94 16 44 H 0.06 0.04 8.14 -51.93 -0.42 -0.39 16 45 H 0.07 0.11 7.82 -51.93 -0.41 -0.30 16 46 H 0.06 -0.05 8.14 -51.93 -0.42 -0.48 16 47 H 0.07 0.15 8.14 -51.93 -0.42 -0.28 16 48 H 0.16 0.10 7.61 -52.49 -0.40 -0.30 16 LS Contribution 398.48 15.07 6.01 6.01 Total: 0.00 -13.56 398.48 -10.78 -24.35 By element: Atomic # 1 Polarization: -9.59 SS G_CDS: -5.96 Total: -15.55 kcal Atomic # 6 Polarization: 2.00 SS G_CDS: -2.94 Total: -0.94 kcal Atomic # 7 Polarization: 2.00 SS G_CDS: -0.12 Total: 1.87 kcal Atomic # 8 Polarization: -5.33 SS G_CDS: -2.70 Total: -8.03 kcal Atomic # 14 Polarization: -2.64 SS G_CDS: -5.06 Total: -7.70 kcal Total LS contribution 6.01 Total: 6.01 kcal Total: -13.56 -10.78 -24.35 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207542_4549638.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -104.680 kcal (2) G-P(sol) polarization free energy of solvation -13.561 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -118.241 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.785 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.346 kcal (6) G-S(sol) free energy of system = (1) + (5) -129.026 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds