Wall clock time and date at job start Tue Mar 9 2021 12:57:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35966 * 116.99567 * 2 1 4 4 C 1.39450 * 120.11639 * 179.97438 * 3 2 1 5 5 O 1.34773 * 133.24714 * 0.32756 * 4 3 2 6 6 C 1.34923 * 110.84710 * 180.12305 * 5 4 3 7 7 C 1.46987 * 125.14529 * 179.85594 * 6 5 4 8 8 O 1.21652 * 119.99969 * 179.69666 * 7 6 5 9 9 N 1.34781 * 119.99836 * 359.68910 * 7 6 5 10 10 C 1.46499 * 119.99874 * 180.02562 * 9 7 6 11 11 H 1.09002 * 109.47391 * 325.00213 * 10 9 7 12 12 C 1.53000 * 109.46840 * 85.00543 * 10 9 7 13 13 C 1.53001 * 109.46886 * 180.02562 * 12 10 9 14 14 C 1.53002 * 109.46963 * 299.99499 * 13 12 10 15 15 H 1.09002 * 109.47067 * 300.00341 * 14 13 12 16 16 C 1.53002 * 109.47454 * 180.02562 * 14 13 12 17 17 O 1.42901 * 109.46914 * 65.00068 * 16 14 13 18 18 C 1.52997 * 109.47092 * 60.00194 * 14 13 12 19 19 C 1.53002 * 109.46799 * 205.00309 * 10 9 7 20 20 C 1.35817 * 109.71315 * 359.58574 * 6 5 4 21 21 C 1.40611 * 119.13539 * 180.02562 * 4 3 2 22 22 C 1.39785 * 120.11714 * 359.97438 * 21 4 3 23 23 C 1.50698 * 120.09192 * 179.97438 * 22 21 4 24 24 O 1.42896 * 109.47145 * 284.99670 * 23 22 21 25 25 Si 1.86293 * 109.47113 * 164.99675 * 23 22 21 26 26 C 1.36627 * 119.81500 * 359.97438 * 22 21 4 27 27 C 1.38257 * 120.12436 * 0.02562 * 3 2 1 28 28 H 1.08998 * 109.47121 * 180.02562 * 1 2 3 29 29 H 1.09002 * 109.47367 * 300.00183 * 1 2 3 30 30 H 1.09003 * 109.47115 * 60.00452 * 1 2 3 31 31 H 0.97002 * 119.99716 * 0.02562 * 9 7 6 32 32 H 1.09001 * 109.47194 * 299.99493 * 12 10 9 33 33 H 1.08992 * 109.47399 * 59.99666 * 12 10 9 34 34 H 1.09000 * 109.47437 * 180.02562 * 13 12 10 35 35 H 1.09002 * 109.47508 * 59.99571 * 13 12 10 36 36 H 1.08998 * 109.47254 * 185.00083 * 16 14 13 37 37 H 1.09000 * 109.46519 * 305.00454 * 16 14 13 38 38 H 0.96693 * 113.99989 * 180.02562 * 17 16 14 39 39 H 1.09001 * 109.47375 * 180.02562 * 18 14 13 40 40 H 1.09002 * 109.47497 * 59.99850 * 18 14 13 41 41 H 1.09002 * 109.47075 * 299.99543 * 19 10 9 42 42 H 1.08996 * 109.47407 * 60.00500 * 19 10 9 43 43 H 1.08002 * 126.95078 * 180.26644 * 20 6 5 44 44 H 1.09003 * 109.46996 * 44.99870 * 23 22 21 45 45 H 0.96704 * 114.00331 * 179.97438 * 24 23 22 46 46 H 1.48504 * 110.00044 * 59.99949 * 25 23 22 47 47 H 1.48505 * 110.00105 * 181.31867 * 25 23 22 48 48 H 1.07992 * 119.75389 * 180.02562 * 26 22 21 49 49 H 1.08001 * 119.66253 * 359.97438 * 27 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2115 0.0000 4 6 3.4386 1.2874 0.0005 5 8 4.4141 0.3575 -0.0045 6 6 5.6317 0.9388 0.0015 7 6 6.9131 0.2187 0.0015 8 8 7.9595 0.8391 0.0016 9 7 6.9287 -1.1291 0.0014 10 6 8.2058 -1.8468 0.0019 11 1 8.9353 -1.2909 -0.5872 12 6 8.7113 -1.9872 1.4392 13 6 10.0454 -2.7362 1.4397 14 6 9.8504 -4.1257 0.8296 15 1 9.1211 -4.6820 1.4186 16 6 11.1843 -4.8751 0.8306 17 8 11.5984 -5.1086 2.1783 18 6 9.3449 -3.9854 -0.6076 19 6 8.0101 -3.2363 -0.6080 20 6 5.4943 2.2900 0.0016 21 6 4.0553 2.5511 0.0011 22 6 3.2763 3.7117 0.0005 23 6 3.9379 5.0657 0.0017 24 8 4.4587 5.3403 1.3037 25 14 2.6867 6.3686 -0.4540 26 6 1.9135 3.6152 -0.0011 27 6 1.2956 2.3726 0.0005 28 1 -0.3633 -1.0276 0.0005 29 1 -0.3634 0.5139 0.8900 30 1 -0.3633 0.5138 -0.8900 31 1 6.0943 -1.6237 0.0010 32 1 8.8507 -0.9973 1.8737 33 1 7.9819 -2.5431 2.0282 34 1 10.4053 -2.8367 2.4636 35 1 10.7747 -2.1800 0.8507 36 1 11.0657 -5.8289 0.3165 37 1 11.9374 -4.2769 0.3176 38 1 12.4389 -5.5804 2.2553 39 1 9.2055 -4.9753 -1.0421 40 1 10.0741 -3.4291 -1.1966 41 1 7.2807 -3.7922 -0.0189 42 1 7.6501 -3.1363 -1.6319 43 1 6.2873 3.0232 0.0017 44 1 4.7512 5.0734 -0.7240 45 1 4.9000 6.1976 1.3782 46 1 1.5726 6.3684 0.5278 47 1 3.3340 7.7048 -0.4875 48 1 1.3126 4.5125 -0.0019 49 1 0.2173 2.3120 0.0005 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207542_6672420.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:47 Heat of formation + Delta-G solvation = -125.218998 kcal Electronic energy + Delta-G solvation = -32522.039234 eV Core-core repulsion = 27996.380424 eV Total energy + Delta-G solvation = -4525.658810 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.165 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -43.60305 -41.13102 -40.53281 -39.47378 -38.96389 -37.45818 -37.16194 -35.26839 -33.51765 -32.09047 -31.82073 -31.61655 -30.63195 -28.66373 -26.65064 -26.14050 -24.59271 -23.89933 -23.80535 -22.25603 -21.69124 -21.53169 -20.93410 -19.61656 -18.79641 -18.54960 -18.45406 -18.16699 -17.57963 -17.38642 -16.93798 -16.61870 -16.33654 -16.29586 -15.92646 -15.67540 -15.63148 -15.43643 -15.00474 -14.72117 -14.55026 -14.46964 -14.10793 -14.00759 -13.98865 -13.84675 -13.55364 -13.36813 -13.22499 -13.17440 -13.01597 -12.64423 -12.42084 -12.27936 -12.16450 -12.05563 -11.71148 -11.68953 -11.46901 -11.36692 -11.15639 -10.88892 -10.85885 -10.48840 -10.14654 -9.70072 -8.92979 -5.00512 -0.52679 0.18694 0.77414 1.21750 1.35274 1.54620 1.89262 1.99805 2.10493 2.12882 2.42830 3.17594 3.23810 3.39181 3.58217 3.60724 3.69629 3.75244 3.89162 3.89699 3.96533 4.00259 4.05605 4.13357 4.14205 4.20441 4.22835 4.32373 4.35828 4.40674 4.44765 4.49211 4.51065 4.51914 4.56163 4.60356 4.77473 4.87898 4.91513 4.94445 4.99157 5.06078 5.12073 5.12262 5.24942 5.30423 5.32812 5.39087 5.41006 5.48752 5.69224 6.21092 6.40422 6.43933 6.68668 7.00412 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.311 6.311 3 C 0.150 3.850 4 C 0.046 3.954 5 O -0.173 6.173 6 C -0.023 4.023 7 C 0.603 3.397 8 O -0.510 6.510 9 N -0.714 5.714 10 C 0.144 3.856 11 H 0.093 0.907 12 C -0.131 4.131 13 C -0.107 4.107 14 C -0.091 4.091 15 H 0.079 0.921 16 C 0.079 3.921 17 O -0.573 6.573 18 C -0.109 4.109 19 C -0.125 4.125 20 C -0.105 4.105 21 C -0.082 4.082 22 C -0.051 4.051 23 C -0.075 4.075 24 O -0.533 6.533 25 Si 0.688 3.312 26 C -0.090 4.090 27 C -0.177 4.177 28 H 0.105 0.895 29 H 0.060 0.940 30 H 0.061 0.939 31 H 0.408 0.592 32 H 0.070 0.930 33 H 0.066 0.934 34 H 0.075 0.925 35 H 0.064 0.936 36 H 0.046 0.954 37 H 0.046 0.954 38 H 0.380 0.620 39 H 0.072 0.928 40 H 0.069 0.931 41 H 0.072 0.928 42 H 0.074 0.926 43 H 0.172 0.828 44 H 0.077 0.923 45 H 0.380 0.620 46 H -0.253 1.253 47 H -0.259 1.259 48 H 0.140 0.860 49 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.159 -1.680 -4.024 5.384 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.224 6.224 3 C 0.104 3.896 4 C -0.002 4.002 5 O -0.075 6.075 6 C -0.074 4.074 7 C 0.388 3.612 8 O -0.387 6.387 9 N -0.364 5.364 10 C 0.040 3.960 11 H 0.112 0.888 12 C -0.170 4.170 13 C -0.145 4.145 14 C -0.109 4.109 15 H 0.098 0.902 16 C 0.001 3.999 17 O -0.379 6.379 18 C -0.147 4.147 19 C -0.163 4.163 20 C -0.125 4.125 21 C -0.083 4.083 22 C -0.051 4.051 23 C -0.184 4.184 24 O -0.340 6.340 25 Si 0.589 3.411 26 C -0.108 4.108 27 C -0.196 4.196 28 H 0.123 0.877 29 H 0.078 0.922 30 H 0.080 0.920 31 H 0.243 0.757 32 H 0.089 0.911 33 H 0.085 0.915 34 H 0.093 0.907 35 H 0.082 0.918 36 H 0.064 0.936 37 H 0.065 0.935 38 H 0.227 0.773 39 H 0.090 0.910 40 H 0.088 0.912 41 H 0.091 0.909 42 H 0.093 0.907 43 H 0.190 0.810 44 H 0.095 0.905 45 H 0.228 0.772 46 H -0.178 1.178 47 H -0.184 1.184 48 H 0.157 0.843 49 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges -3.586 -1.291 -3.544 5.204 hybrid contribution 0.700 0.026 0.697 0.988 sum -2.886 -1.265 -2.847 4.246 Atomic orbital electron populations 1.23189 0.77354 1.04718 1.01809 1.86170 1.22130 1.25669 1.88407 1.17725 0.86477 0.85862 0.99497 1.18736 0.87445 0.86876 1.07168 1.84046 1.12639 1.34699 1.76118 1.21987 0.83937 0.92588 1.08848 1.16618 0.85375 0.82217 0.76973 1.90911 1.30310 1.67468 1.49983 1.46010 1.10564 1.05644 1.74171 1.21154 0.84892 0.92501 0.97453 0.88846 1.21953 0.97646 1.01394 0.95972 1.21480 0.96602 0.94308 1.02110 1.21210 0.96332 0.96678 0.96684 0.90230 1.22225 0.95942 0.98365 0.83374 1.86473 1.43869 1.80714 1.26838 1.21466 0.96455 1.00802 0.96004 1.21797 0.98456 0.94426 1.01647 1.22690 0.94670 0.94324 1.00865 1.19400 0.92655 0.92103 1.04167 1.18337 0.92360 0.92006 1.02403 1.24779 1.04890 1.00589 0.88156 1.86623 1.76817 1.41126 1.29448 0.94988 0.79619 0.76937 0.89541 1.20521 0.93356 0.97794 0.99153 1.20949 1.00369 0.90439 1.07846 0.87668 0.92157 0.92014 0.75712 0.91123 0.91508 0.90671 0.91752 0.93611 0.93537 0.77274 0.90952 0.91197 0.90941 0.90738 0.81025 0.90522 0.77194 1.17760 1.18412 0.84263 0.83412 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 101.05 0.99 0.94 16 2 O -0.31 -0.60 10.50 -19.63 -0.21 -0.80 16 3 C 0.15 0.36 6.70 -39.12 -0.26 0.10 16 4 C 0.05 0.18 7.35 -38.24 -0.28 -0.10 16 5 O -0.17 -0.68 10.28 2.68 0.03 -0.66 16 6 C -0.02 -0.09 7.07 -36.91 -0.26 -0.35 16 7 C 0.60 2.23 7.76 -12.71 -0.10 2.13 16 8 O -0.51 -3.23 16.49 5.23 0.09 -3.15 16 9 N -0.71 -0.78 5.07 -55.02 -0.28 -1.06 16 10 C 0.14 0.07 2.45 -67.93 -0.17 -0.10 16 11 H 0.09 0.16 7.58 -51.93 -0.39 -0.23 16 12 C -0.13 -0.14 5.49 -26.73 -0.15 -0.28 16 13 C -0.11 -0.08 5.10 -26.73 -0.14 -0.21 16 14 C -0.09 0.03 2.43 -90.62 -0.22 -0.19 16 15 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 16 C 0.08 -0.04 6.43 37.16 0.24 0.19 16 17 O -0.57 -0.49 13.19 -35.23 -0.46 -0.95 16 18 C -0.11 0.18 5.21 -26.70 -0.14 0.04 16 19 C -0.13 0.19 5.40 -26.70 -0.14 0.04 16 20 C -0.10 -0.37 10.68 -37.24 -0.40 -0.77 16 21 C -0.08 -0.29 6.16 -105.21 -0.65 -0.94 16 22 C -0.05 -0.11 5.30 -104.63 -0.55 -0.66 16 23 C -0.07 -0.03 2.70 36.00 0.10 0.06 16 24 O -0.53 -0.93 12.85 -35.23 -0.45 -1.39 16 25 Si 0.69 -0.78 30.20 -169.99 -5.13 -5.92 16 26 C -0.09 -0.06 8.62 -39.97 -0.34 -0.40 16 27 C -0.18 -0.05 9.03 -39.38 -0.36 -0.41 16 28 H 0.10 -0.39 8.14 -51.93 -0.42 -0.81 16 29 H 0.06 -0.19 7.66 -51.93 -0.40 -0.59 16 30 H 0.06 -0.23 7.66 -51.93 -0.40 -0.62 16 31 H 0.41 -0.19 8.32 -40.82 -0.34 -0.53 16 32 H 0.07 0.20 8.14 -51.93 -0.42 -0.22 16 33 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 34 H 0.07 0.15 7.82 -51.93 -0.41 -0.26 16 35 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 36 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 37 H 0.05 -0.05 8.14 -51.93 -0.42 -0.48 16 38 H 0.38 -1.22 9.12 45.56 0.42 -0.80 16 39 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 40 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 41 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 42 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 43 H 0.17 0.43 8.06 -52.49 -0.42 0.01 16 44 H 0.08 -0.07 7.96 -51.93 -0.41 -0.48 16 45 H 0.38 -0.88 8.74 45.56 0.40 -0.48 16 46 H -0.25 -0.32 6.75 56.52 0.38 0.06 16 47 H -0.26 -0.24 7.11 56.52 0.40 0.17 16 48 H 0.14 -0.17 4.85 -52.49 -0.25 -0.43 16 49 H 0.15 -0.39 6.26 -52.49 -0.33 -0.72 16 LS Contribution 399.71 15.07 6.02 6.02 Total: 0.00 -9.46 399.71 -9.64 -19.10 By element: Atomic # 1 Polarization: -3.89 SS G_CDS: -6.41 Total: -10.30 kcal Atomic # 6 Polarization: 1.92 SS G_CDS: -2.83 Total: -0.91 kcal Atomic # 7 Polarization: -0.78 SS G_CDS: -0.28 Total: -1.06 kcal Atomic # 8 Polarization: -5.93 SS G_CDS: -1.01 Total: -6.94 kcal Atomic # 14 Polarization: -0.78 SS G_CDS: -5.13 Total: -5.92 kcal Total LS contribution 6.02 Total: 6.02 kcal Total: -9.46 -9.64 -19.10 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207542_6672420.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -106.122 kcal (2) G-P(sol) polarization free energy of solvation -9.462 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -115.584 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.635 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.097 kcal (6) G-S(sol) free energy of system = (1) + (5) -125.219 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds