Wall clock time and date at job start Tue Mar 9 2021 12:57:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35966 * 116.99567 * 2 1 4 4 C 1.39450 * 120.11639 * 179.97438 * 3 2 1 5 5 O 1.34773 * 133.24714 * 0.32756 * 4 3 2 6 6 C 1.34923 * 110.84710 * 180.12305 * 5 4 3 7 7 C 1.46987 * 125.14529 * 179.85594 * 6 5 4 8 8 O 1.21652 * 119.99969 * 179.69666 * 7 6 5 9 9 N 1.34781 * 119.99836 * 359.68910 * 7 6 5 10 10 C 1.46499 * 119.99874 * 180.02562 * 9 7 6 11 11 H 1.09002 * 109.47391 * 325.00213 * 10 9 7 12 12 C 1.53000 * 109.46840 * 85.00543 * 10 9 7 13 13 C 1.53001 * 109.46886 * 180.02562 * 12 10 9 14 14 C 1.53002 * 109.46963 * 299.99499 * 13 12 10 15 15 H 1.09002 * 109.47067 * 300.00341 * 14 13 12 16 16 C 1.53002 * 109.47454 * 180.02562 * 14 13 12 17 17 O 1.42901 * 109.46914 * 65.00068 * 16 14 13 18 18 C 1.52997 * 109.47092 * 60.00194 * 14 13 12 19 19 C 1.53002 * 109.46799 * 205.00309 * 10 9 7 20 20 C 1.35817 * 109.71315 * 359.58574 * 6 5 4 21 21 C 1.40611 * 119.13539 * 180.02562 * 4 3 2 22 22 C 1.39785 * 120.11714 * 359.97438 * 21 4 3 23 23 C 1.50698 * 120.09192 * 179.97438 * 22 21 4 24 24 O 1.42896 * 109.47145 * 284.99670 * 23 22 21 25 25 Si 1.86293 * 109.47113 * 164.99675 * 23 22 21 26 26 C 1.36627 * 119.81500 * 359.97438 * 22 21 4 27 27 C 1.38257 * 120.12436 * 0.02562 * 3 2 1 28 28 H 1.08998 * 109.47121 * 180.02562 * 1 2 3 29 29 H 1.09002 * 109.47367 * 300.00183 * 1 2 3 30 30 H 1.09003 * 109.47115 * 60.00452 * 1 2 3 31 31 H 0.97002 * 119.99716 * 0.02562 * 9 7 6 32 32 H 1.09001 * 109.47194 * 299.99493 * 12 10 9 33 33 H 1.08992 * 109.47399 * 59.99666 * 12 10 9 34 34 H 1.09000 * 109.47437 * 180.02562 * 13 12 10 35 35 H 1.09002 * 109.47508 * 59.99571 * 13 12 10 36 36 H 1.08998 * 109.47254 * 185.00083 * 16 14 13 37 37 H 1.09000 * 109.46519 * 305.00454 * 16 14 13 38 38 H 0.96693 * 113.99989 * 180.02562 * 17 16 14 39 39 H 1.09001 * 109.47375 * 180.02562 * 18 14 13 40 40 H 1.09002 * 109.47497 * 59.99850 * 18 14 13 41 41 H 1.09002 * 109.47075 * 299.99543 * 19 10 9 42 42 H 1.08996 * 109.47407 * 60.00500 * 19 10 9 43 43 H 1.08002 * 126.95078 * 180.26644 * 20 6 5 44 44 H 1.09003 * 109.46996 * 44.99870 * 23 22 21 45 45 H 0.96704 * 114.00331 * 179.97438 * 24 23 22 46 46 H 1.48504 * 110.00044 * 59.99949 * 25 23 22 47 47 H 1.48505 * 110.00105 * 181.31867 * 25 23 22 48 48 H 1.07992 * 119.75389 * 180.02562 * 26 22 21 49 49 H 1.08001 * 119.66253 * 359.97438 * 27 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2115 0.0000 4 6 3.4386 1.2874 0.0005 5 8 4.4141 0.3575 -0.0045 6 6 5.6317 0.9388 0.0015 7 6 6.9131 0.2187 0.0015 8 8 7.9595 0.8391 0.0016 9 7 6.9287 -1.1291 0.0014 10 6 8.2058 -1.8468 0.0019 11 1 8.9353 -1.2909 -0.5872 12 6 8.7113 -1.9872 1.4392 13 6 10.0454 -2.7362 1.4397 14 6 9.8504 -4.1257 0.8296 15 1 9.1211 -4.6820 1.4186 16 6 11.1843 -4.8751 0.8306 17 8 11.5984 -5.1086 2.1783 18 6 9.3449 -3.9854 -0.6076 19 6 8.0101 -3.2363 -0.6080 20 6 5.4943 2.2900 0.0016 21 6 4.0553 2.5511 0.0011 22 6 3.2763 3.7117 0.0005 23 6 3.9379 5.0657 0.0017 24 8 4.4587 5.3403 1.3037 25 14 2.6867 6.3686 -0.4540 26 6 1.9135 3.6152 -0.0011 27 6 1.2956 2.3726 0.0005 28 1 -0.3633 -1.0276 0.0005 29 1 -0.3634 0.5139 0.8900 30 1 -0.3633 0.5138 -0.8900 31 1 6.0943 -1.6237 0.0010 32 1 8.8507 -0.9973 1.8737 33 1 7.9819 -2.5431 2.0282 34 1 10.4053 -2.8367 2.4636 35 1 10.7747 -2.1800 0.8507 36 1 11.0657 -5.8289 0.3165 37 1 11.9374 -4.2769 0.3176 38 1 12.4389 -5.5804 2.2553 39 1 9.2055 -4.9753 -1.0421 40 1 10.0741 -3.4291 -1.1966 41 1 7.2807 -3.7922 -0.0189 42 1 7.6501 -3.1363 -1.6319 43 1 6.2873 3.0232 0.0017 44 1 4.7512 5.0734 -0.7240 45 1 4.9000 6.1976 1.3782 46 1 1.5726 6.3684 0.5278 47 1 3.3340 7.7048 -0.4875 48 1 1.3126 4.5125 -0.0019 49 1 0.2173 2.3120 0.0005 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7207542_6672420.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:46 Heat of formation + Delta-G solvation = -128.030508 kcal Electronic energy + Delta-G solvation = -32522.161150 eV Core-core repulsion = 27996.380424 eV Total energy + Delta-G solvation = -4525.780726 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.165 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -43.79143 -41.30711 -40.59132 -39.58967 -39.02117 -37.50189 -37.22886 -35.42005 -33.69924 -32.19353 -31.85072 -31.69412 -30.71833 -28.56884 -26.68525 -26.16576 -24.71715 -24.04275 -23.81852 -22.29869 -21.82312 -21.72974 -20.96530 -19.74074 -18.91919 -18.60514 -18.51900 -18.15694 -17.77262 -17.53112 -17.05028 -16.64614 -16.37090 -16.33690 -15.99979 -15.79540 -15.64041 -15.52479 -15.07684 -14.78768 -14.61385 -14.57165 -14.24614 -14.05121 -14.00589 -13.93256 -13.60666 -13.39604 -13.25435 -13.20905 -13.01990 -12.54832 -12.39470 -12.33617 -12.16085 -12.07719 -11.82382 -11.74610 -11.50405 -11.46854 -11.24117 -11.05010 -10.83526 -10.49858 -10.33201 -9.86256 -9.03542 -4.91148 -0.70848 0.06277 0.57847 1.13695 1.28166 1.61149 1.83681 1.86940 1.93098 2.11032 2.33374 3.11327 3.29785 3.35821 3.52558 3.56832 3.68982 3.72768 3.78779 3.87365 3.93697 3.97423 3.97756 4.11526 4.25473 4.29951 4.31639 4.35459 4.38455 4.41245 4.42271 4.45572 4.48896 4.57659 4.68872 4.75581 4.79777 4.80213 4.83128 4.89777 5.00309 5.00983 5.04844 5.11808 5.17180 5.18655 5.23405 5.33372 5.35710 5.45349 5.55358 6.16109 6.26387 6.57072 6.78164 6.89348 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.332 6.332 3 C 0.138 3.862 4 C 0.021 3.979 5 O -0.180 6.180 6 C -0.034 4.034 7 C 0.603 3.397 8 O -0.544 6.544 9 N -0.701 5.701 10 C 0.145 3.855 11 H 0.080 0.920 12 C -0.126 4.126 13 C -0.103 4.103 14 C -0.089 4.089 15 H 0.072 0.928 16 C 0.076 3.924 17 O -0.597 6.597 18 C -0.105 4.105 19 C -0.119 4.119 20 C -0.111 4.111 21 C -0.098 4.098 22 C -0.065 4.065 23 C -0.093 4.093 24 O -0.558 6.558 25 Si 0.780 3.220 26 C -0.089 4.089 27 C -0.165 4.165 28 H 0.117 0.883 29 H 0.071 0.929 30 H 0.078 0.922 31 H 0.416 0.584 32 H 0.047 0.953 33 H 0.069 0.931 34 H 0.059 0.941 35 H 0.062 0.938 36 H 0.059 0.941 37 H 0.052 0.948 38 H 0.395 0.605 39 H 0.088 0.912 40 H 0.072 0.928 41 H 0.081 0.919 42 H 0.083 0.917 43 H 0.174 0.826 44 H 0.085 0.915 45 H 0.394 0.606 46 H -0.280 1.280 47 H -0.287 1.287 48 H 0.161 0.839 49 H 0.181 0.819 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.828 -2.019 -4.920 7.183 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 O -0.246 6.246 3 C 0.092 3.908 4 C -0.027 4.027 5 O -0.082 6.082 6 C -0.084 4.084 7 C 0.388 3.612 8 O -0.423 6.423 9 N -0.350 5.350 10 C 0.041 3.959 11 H 0.098 0.902 12 C -0.165 4.165 13 C -0.141 4.141 14 C -0.107 4.107 15 H 0.091 0.909 16 C -0.001 4.001 17 O -0.405 6.405 18 C -0.143 4.143 19 C -0.157 4.157 20 C -0.132 4.132 21 C -0.099 4.099 22 C -0.066 4.066 23 C -0.201 4.201 24 O -0.368 6.368 25 Si 0.683 3.317 26 C -0.107 4.107 27 C -0.184 4.184 28 H 0.135 0.865 29 H 0.090 0.910 30 H 0.097 0.903 31 H 0.253 0.747 32 H 0.066 0.934 33 H 0.088 0.912 34 H 0.078 0.922 35 H 0.080 0.920 36 H 0.078 0.922 37 H 0.070 0.930 38 H 0.245 0.755 39 H 0.106 0.894 40 H 0.091 0.909 41 H 0.099 0.901 42 H 0.102 0.898 43 H 0.192 0.808 44 H 0.103 0.897 45 H 0.245 0.755 46 H -0.207 1.207 47 H -0.214 1.214 48 H 0.178 0.822 49 H 0.199 0.801 Dipole moment (debyes) X Y Z Total from point charges -5.247 -1.679 -4.445 7.079 hybrid contribution 1.179 0.142 1.028 1.570 sum -4.068 -1.537 -3.417 5.531 Atomic orbital electron populations 1.23498 0.75295 1.06082 1.03160 1.86145 1.24335 1.25640 1.88431 1.17943 0.86081 0.86831 0.99929 1.19184 0.88270 0.87056 1.08182 1.84005 1.12679 1.34983 1.76501 1.21966 0.84035 0.92757 1.09616 1.16673 0.84965 0.82845 0.76677 1.90882 1.31326 1.68239 1.51884 1.45983 1.11360 1.04897 1.72783 1.21195 0.84220 0.93517 0.96932 0.90155 1.21884 0.98112 1.00173 0.96323 1.21415 0.96104 0.95228 1.01317 1.21200 0.96623 0.95546 0.97358 0.90933 1.22302 0.95767 0.99072 0.82998 1.86432 1.45147 1.81185 1.27777 1.21454 0.96158 1.01599 0.95066 1.21779 0.98998 0.92843 1.02067 1.22840 0.95207 0.94470 1.00690 1.19593 0.92540 0.92794 1.04994 1.18663 0.93113 0.92251 1.02525 1.25168 1.06217 1.00786 0.87895 1.86572 1.77348 1.42572 1.30283 0.93951 0.76566 0.73685 0.87514 1.20837 0.92970 0.98842 0.98052 1.21352 1.01862 0.89462 1.05719 0.86486 0.91011 0.90330 0.74668 0.93431 0.91240 0.92189 0.91964 0.92248 0.92981 0.75514 0.89394 0.90944 0.90082 0.89802 0.80816 0.89652 0.75509 1.20739 1.21370 0.82154 0.80145 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.08 9.81 113.37 1.11 1.03 16 2 O -0.33 -1.25 10.50 -93.17 -0.98 -2.23 16 3 C 0.14 0.69 6.70 22.57 0.15 0.84 16 4 C 0.02 0.20 7.35 23.14 0.17 0.37 16 5 O -0.18 -1.77 10.28 -13.33 -0.14 -1.91 16 6 C -0.03 -0.33 7.07 24.00 0.17 -0.16 16 7 C 0.60 5.87 7.76 86.54 0.67 6.54 16 8 O -0.54 -8.42 16.49 -4.19 -0.07 -8.49 16 9 N -0.70 -2.60 5.07 -446.21 -2.26 -4.86 16 10 C 0.14 0.31 2.45 44.99 0.11 0.42 16 11 H 0.08 0.42 7.58 -2.39 -0.02 0.40 16 12 C -0.13 -0.49 5.49 30.59 0.17 -0.32 16 13 C -0.10 -0.29 5.10 30.60 0.16 -0.14 16 14 C -0.09 0.04 2.43 -10.79 -0.03 0.02 16 15 H 0.07 0.08 8.14 -2.39 -0.02 0.06 16 16 C 0.08 -0.10 6.43 71.98 0.46 0.36 16 17 O -0.60 -1.19 13.19 -148.98 -1.97 -3.16 16 18 C -0.10 0.41 5.21 30.61 0.16 0.57 16 19 C -0.12 0.39 5.40 30.61 0.17 0.55 16 20 C -0.11 -1.05 10.68 23.79 0.25 -0.80 16 21 C -0.10 -0.84 6.16 -20.24 -0.12 -0.97 16 22 C -0.06 -0.29 5.30 -19.87 -0.11 -0.40 16 23 C -0.09 -0.11 2.70 71.24 0.19 0.09 16 24 O -0.56 -2.36 12.85 -148.98 -1.92 -4.28 16 25 Si 0.78 -2.42 30.20 68.60 2.07 -0.34 16 26 C -0.09 -0.04 8.62 22.02 0.19 0.15 16 27 C -0.17 0.09 9.03 22.40 0.20 0.30 16 28 H 0.12 -1.00 8.14 -2.39 -0.02 -1.02 16 29 H 0.07 -0.59 7.66 -2.39 -0.02 -0.61 16 30 H 0.08 -0.73 7.66 -2.39 -0.02 -0.75 16 31 H 0.42 0.05 8.32 -92.71 -0.77 -0.72 16 32 H 0.05 0.41 8.14 -2.39 -0.02 0.39 16 33 H 0.07 0.22 8.14 -2.39 -0.02 0.20 16 34 H 0.06 0.35 7.82 -2.39 -0.02 0.33 16 35 H 0.06 0.19 8.14 -2.39 -0.02 0.17 16 36 H 0.06 -0.24 8.14 -2.39 -0.02 -0.26 16 37 H 0.05 -0.13 8.14 -2.39 -0.02 -0.15 16 38 H 0.40 -2.47 9.12 -74.06 -0.68 -3.14 16 39 H 0.09 -0.56 8.14 -2.39 -0.02 -0.58 16 40 H 0.07 -0.29 8.14 -2.39 -0.02 -0.31 16 41 H 0.08 -0.36 8.14 -2.39 -0.02 -0.38 16 42 H 0.08 -0.38 8.14 -2.39 -0.02 -0.40 16 43 H 0.17 1.35 8.06 -2.91 -0.02 1.32 16 44 H 0.09 -0.11 7.96 -2.39 -0.02 -0.13 16 45 H 0.39 -1.57 8.74 -74.05 -0.65 -2.22 16 46 H -0.28 -0.42 6.75 99.48 0.67 0.25 16 47 H -0.29 -0.41 7.11 99.48 0.71 0.30 16 48 H 0.16 -0.69 4.85 -2.91 -0.01 -0.71 16 49 H 0.18 -1.44 6.26 -2.91 -0.02 -1.46 16 Total: 0.00 -23.94 399.71 -2.26 -26.19 By element: Atomic # 1 Polarization: -8.30 SS G_CDS: -1.08 Total: -9.38 kcal Atomic # 6 Polarization: 4.37 SS G_CDS: 4.08 Total: 8.45 kcal Atomic # 7 Polarization: -2.60 SS G_CDS: -2.26 Total: -4.86 kcal Atomic # 8 Polarization: -14.99 SS G_CDS: -5.07 Total: -20.06 kcal Atomic # 14 Polarization: -2.42 SS G_CDS: 2.07 Total: -0.34 kcal Total: -23.94 -2.26 -26.19 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207542_6672420.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -101.836 kcal (2) G-P(sol) polarization free energy of solvation -23.938 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -125.774 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.256 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.195 kcal (6) G-S(sol) free energy of system = (1) + (5) -128.031 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds