Wall clock time and date at job start Tue Mar 9 2021 13:01:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.53003 * 109.47318 * 2 1 4 4 C 1.52991 * 109.47350 * 172.69644 * 3 2 1 5 5 C 1.53004 * 109.46712 * 292.70192 * 3 2 1 6 6 C 1.50689 * 109.47485 * 67.22253 * 5 3 2 7 7 O 1.21285 * 120.00033 * 235.71456 * 6 5 3 8 8 N 1.34781 * 120.00406 * 55.72005 * 6 5 3 9 9 C 1.46490 * 120.00700 * 174.98972 * 8 6 5 10 10 H 1.09009 * 112.84817 * 23.80294 * 9 8 6 11 11 C 1.53775 * 113.61713 * 154.99594 * 9 8 6 12 12 C 1.53786 * 87.07963 * 139.98293 * 11 9 8 13 13 H 1.09007 * 113.61349 * 89.20525 * 12 11 9 14 14 O 1.42898 * 113.61496 * 220.01973 * 12 11 9 15 15 C 1.53775 * 87.08256 * 334.56743 * 12 11 9 16 16 N 1.46506 * 109.46772 * 307.21904 * 5 3 2 17 17 C 1.36336 * 125.63227 * 70.28071 * 16 5 3 18 18 C 1.34854 * 108.21732 * 180.26102 * 17 16 5 19 19 C 1.40889 * 107.41657 * 359.73928 * 18 17 16 20 20 C 1.34855 * 107.41577 * 359.97438 * 19 18 17 21 21 C 1.50694 * 125.88727 * 180.02562 * 20 19 18 22 22 O 1.42907 * 109.47020 * 150.02552 * 21 20 19 23 23 Si 1.86299 * 109.47756 * 30.02217 * 21 20 19 24 24 H 1.08994 * 109.47216 * 71.72094 * 1 2 3 25 25 H 1.09003 * 109.46953 * 191.71660 * 1 2 3 26 26 H 1.09005 * 109.47061 * 311.71801 * 1 2 3 27 27 H 1.09003 * 109.47269 * 239.99853 * 2 1 3 28 28 H 1.09003 * 109.47327 * 119.99551 * 2 1 3 29 29 H 1.09000 * 109.46884 * 52.69449 * 3 2 1 30 30 H 1.09003 * 109.47387 * 184.90845 * 4 3 2 31 31 H 1.08995 * 109.47388 * 304.90422 * 4 3 2 32 32 H 1.08997 * 109.47279 * 64.90908 * 4 3 2 33 33 H 1.08999 * 109.46746 * 187.22991 * 5 3 2 34 34 H 0.97010 * 119.99063 * 354.99067 * 8 6 5 35 35 H 1.09001 * 113.61531 * 254.53139 * 11 9 8 36 36 H 1.08999 * 113.61465 * 25.43649 * 11 9 8 37 37 H 0.96699 * 114.00389 * 180.02562 * 14 12 11 38 38 H 1.08999 * 113.61809 * 270.88387 * 15 12 11 39 39 H 1.09002 * 113.61357 * 139.97542 * 15 12 11 40 40 H 1.08003 * 125.89626 * 359.97438 * 17 16 5 41 41 H 1.07996 * 126.29195 * 179.71412 * 18 17 16 42 42 H 1.08001 * 126.29464 * 179.97438 * 19 18 17 43 43 H 1.09005 * 109.46856 * 270.02199 * 21 20 19 44 44 H 0.96698 * 113.99874 * 299.99741 * 22 21 20 45 45 H 1.48500 * 110.00331 * 179.97438 * 23 21 20 46 46 H 1.48493 * 109.99790 * 301.32384 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 3.5589 1.4464 0.1834 5 6 1.6851 2.1088 -1.3308 6 6 0.1897 2.2652 -1.4313 7 8 -0.4063 1.7994 -2.3794 8 7 -0.4855 2.9226 -0.4678 9 6 -1.9214 3.1704 -0.6184 10 1 -2.4050 2.4619 -1.2910 11 6 -2.6588 3.3519 0.7187 12 6 -3.4614 4.4710 0.0342 13 1 -4.3675 4.1193 -0.4593 14 8 -3.6905 5.6057 0.8719 15 6 -2.2651 4.6393 -0.9173 16 7 2.1646 1.2764 -2.4369 17 6 1.6493 0.0685 -2.8033 18 6 2.3565 -0.3898 -3.8561 19 6 3.3408 0.5732 -4.1542 20 6 3.1972 1.5835 -3.2725 21 6 4.0375 2.8331 -3.2165 22 8 3.2515 3.9133 -2.7089 23 14 4.6395 3.2542 -4.9285 24 1 -0.3633 0.3223 -0.9757 25 1 -0.3633 -1.0063 0.2087 26 1 -0.3633 0.6839 0.7671 27 1 1.8933 -0.5139 -0.8900 28 1 1.8933 -0.5138 0.8900 29 1 1.5739 1.9927 0.8174 30 1 3.9117 2.4741 0.2707 31 1 3.8171 0.8956 1.0877 32 1 4.0301 0.9725 -0.6777 33 1 2.1574 3.0898 -1.3832 34 1 -0.0205 3.2318 0.3254 35 1 -3.2646 2.4917 1.0036 36 1 -2.0179 3.7056 1.5263 37 1 -4.1951 6.3128 0.4471 38 1 -1.5165 5.3449 -0.5570 39 1 -2.5530 4.8182 -1.9532 40 1 0.8208 -0.4366 -2.3291 41 1 2.1979 -1.3235 -4.3750 42 1 4.0754 0.5133 -4.9436 43 1 4.8927 2.6668 -2.5613 44 1 2.4719 4.1174 -3.2433 45 1 5.4690 4.4852 -4.8868 46 1 5.4317 2.1257 -5.4801 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7348514_12360566.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:01:06 Heat of formation + Delta-G solvation = -22.951226 kcal Electronic energy + Delta-G solvation = -28156.654921 eV Core-core repulsion = 24436.510050 eV Total energy + Delta-G solvation = -3720.144871 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 309.177 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -42.96341 -41.19476 -39.77519 -37.88270 -37.51408 -36.46097 -33.96698 -33.03597 -31.51137 -30.62312 -28.37607 -26.93457 -25.97054 -25.16546 -24.52926 -22.23451 -21.70756 -21.41464 -21.14104 -20.25783 -18.92864 -18.66300 -18.18691 -17.35369 -16.99208 -16.72023 -16.49713 -16.13729 -15.62726 -15.30490 -15.23238 -14.97655 -14.72594 -14.55600 -14.39284 -14.13366 -14.12026 -13.76885 -13.74397 -13.64158 -13.25696 -13.10987 -12.87652 -12.81824 -12.45756 -12.43432 -12.16105 -12.10719 -11.88127 -11.84713 -11.63975 -11.55866 -11.07626 -10.91662 -10.56279 -10.15307 -9.40378 -8.71392 -4.95136 1.08850 1.37628 1.47185 1.64698 1.78351 1.96459 2.26181 2.31291 3.10669 3.15956 3.25532 3.39012 3.44958 3.56521 3.59813 3.66166 3.76873 3.78913 3.92227 4.19401 4.23095 4.33924 4.34324 4.39951 4.49960 4.53498 4.55891 4.58137 4.61645 4.75968 4.76841 4.78383 4.81007 4.85416 4.92449 4.97521 5.03590 5.12205 5.17994 5.30385 5.37376 5.47959 5.53873 6.12563 6.22667 6.32932 6.45402 6.53524 6.56149 7.01515 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.181 4.181 2 C -0.141 4.141 3 C -0.095 4.095 4 C -0.148 4.148 5 C 0.098 3.902 6 C 0.519 3.481 7 O -0.521 6.521 8 N -0.715 5.715 9 C 0.126 3.874 10 H 0.121 0.879 11 C -0.137 4.137 12 C 0.080 3.920 13 H 0.088 0.912 14 O -0.558 6.558 15 C -0.182 4.182 16 N -0.410 5.410 17 C 0.023 3.977 18 C -0.206 4.206 19 C -0.188 4.188 20 C -0.022 4.022 21 C -0.043 4.043 22 O -0.546 6.546 23 Si 0.716 3.284 24 H 0.073 0.927 25 H 0.058 0.942 26 H 0.057 0.943 27 H 0.085 0.915 28 H 0.069 0.931 29 H 0.086 0.914 30 H 0.060 0.940 31 H 0.063 0.937 32 H 0.061 0.939 33 H 0.155 0.845 34 H 0.403 0.597 35 H 0.083 0.917 36 H 0.096 0.904 37 H 0.382 0.618 38 H 0.094 0.906 39 H 0.076 0.924 40 H 0.162 0.838 41 H 0.136 0.864 42 H 0.137 0.863 43 H 0.115 0.885 44 H 0.380 0.620 45 H -0.255 1.255 46 H -0.253 1.253 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.930 2.253 1.490 3.320 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C -0.179 4.179 3 C -0.114 4.114 4 C -0.205 4.205 5 C -0.008 4.008 6 C 0.305 3.695 7 O -0.397 6.397 8 N -0.367 5.367 9 C 0.021 3.979 10 H 0.138 0.862 11 C -0.175 4.175 12 C 0.020 3.980 13 H 0.105 0.895 14 O -0.364 6.364 15 C -0.222 4.222 16 N -0.086 5.086 17 C -0.106 4.106 18 C -0.230 4.230 19 C -0.213 4.213 20 C -0.132 4.132 21 C -0.153 4.153 22 O -0.352 6.352 23 Si 0.616 3.384 24 H 0.092 0.908 25 H 0.077 0.923 26 H 0.076 0.924 27 H 0.104 0.896 28 H 0.088 0.912 29 H 0.104 0.896 30 H 0.079 0.921 31 H 0.082 0.918 32 H 0.080 0.920 33 H 0.171 0.829 34 H 0.238 0.762 35 H 0.102 0.898 36 H 0.114 0.886 37 H 0.230 0.770 38 H 0.113 0.887 39 H 0.095 0.905 40 H 0.179 0.821 41 H 0.153 0.847 42 H 0.155 0.845 43 H 0.132 0.868 44 H 0.228 0.772 45 H -0.180 1.180 46 H -0.177 1.177 Dipole moment (debyes) X Y Z Total from point charges -0.968 1.889 1.425 2.557 hybrid contribution -0.172 0.039 0.665 0.688 sum -1.141 1.928 2.090 3.064 Atomic orbital electron populations 1.22307 0.95651 1.02528 1.03274 1.21999 0.96197 0.95666 1.04007 1.21537 0.98169 0.97485 0.94234 1.21833 0.93698 1.02444 1.02557 1.21906 0.92535 0.98863 0.87491 1.20463 0.89396 0.77117 0.82536 1.90794 1.69428 1.47132 1.32319 1.45905 1.09354 1.58830 1.22579 1.22236 0.80443 0.96966 0.98294 0.86153 1.23462 0.98720 0.98053 0.97256 1.23068 0.95903 0.87379 0.91660 0.89467 1.86516 1.78089 1.29196 1.42557 1.24210 0.99494 0.97457 1.00994 1.43414 1.25768 1.15782 1.23682 1.21819 1.01599 0.87416 0.99814 1.20825 0.99964 1.01619 1.00623 1.20650 1.03129 0.95537 1.01986 1.20629 0.96305 0.99740 0.96567 1.24815 0.95449 0.83152 1.11891 1.86339 1.42360 1.51735 1.54738 0.93883 0.85447 0.80646 0.78388 0.90803 0.92292 0.92399 0.89643 0.91223 0.89566 0.92067 0.91840 0.91997 0.82852 0.76187 0.89839 0.88576 0.77016 0.88728 0.90530 0.82074 0.84651 0.84549 0.86811 0.77175 1.17965 1.17700 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.05 7.95 37.16 0.30 0.34 16 2 C -0.14 0.06 4.86 -26.73 -0.13 -0.07 16 3 C -0.09 0.13 2.33 -90.62 -0.21 -0.08 16 4 C -0.15 0.13 9.14 37.15 0.34 0.47 16 5 C 0.10 -0.05 2.41 -69.08 -0.17 -0.22 16 6 C 0.52 0.11 4.22 -10.99 -0.05 0.06 16 7 O -0.52 -1.93 13.29 5.55 0.07 -1.86 16 8 N -0.71 1.48 4.45 -53.02 -0.24 1.25 16 9 C 0.13 -0.22 4.27 -67.12 -0.29 -0.50 16 10 H 0.12 -0.04 7.42 -51.92 -0.39 -0.43 16 11 C -0.14 0.30 7.66 -25.92 -0.20 0.10 16 12 C 0.08 -0.15 5.21 -25.92 -0.14 -0.29 16 13 H 0.09 -0.26 8.14 -51.93 -0.42 -0.68 16 14 O -0.56 0.35 13.67 -35.23 -0.48 -0.13 16 15 C -0.18 0.36 7.71 -25.92 -0.20 0.16 16 16 N -0.41 -0.54 1.94 -106.71 -0.21 -0.75 16 17 C 0.02 0.06 6.76 -16.75 -0.11 -0.05 16 18 C -0.21 -0.61 10.86 -39.78 -0.43 -1.04 16 19 C -0.19 -0.45 9.43 -39.78 -0.37 -0.83 16 20 C -0.02 -0.03 5.76 -81.79 -0.47 -0.50 16 21 C -0.04 0.01 2.99 36.00 0.11 0.12 16 22 O -0.55 0.52 9.79 -35.23 -0.34 0.17 16 23 Si 0.72 -0.48 31.31 -169.99 -5.32 -5.80 16 24 H 0.07 0.10 3.44 -51.93 -0.18 -0.08 16 25 H 0.06 0.00 8.14 -51.93 -0.42 -0.43 16 26 H 0.06 -0.06 7.48 -51.93 -0.39 -0.44 16 27 H 0.09 0.08 4.56 -51.93 -0.24 -0.15 16 28 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 29 H 0.09 -0.26 6.94 -51.93 -0.36 -0.62 16 30 H 0.06 -0.07 8.14 -51.93 -0.42 -0.49 16 31 H 0.06 -0.07 8.14 -51.93 -0.42 -0.50 16 32 H 0.06 0.05 7.34 -51.93 -0.38 -0.33 16 33 H 0.15 -0.16 4.97 -51.93 -0.26 -0.42 16 34 H 0.40 -1.56 7.67 -40.82 -0.31 -1.87 16 35 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 36 H 0.10 -0.20 8.12 -51.93 -0.42 -0.62 16 37 H 0.38 -1.68 9.12 45.56 0.42 -1.26 16 38 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 39 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 40 H 0.16 0.39 5.20 -52.48 -0.27 0.12 16 41 H 0.14 0.25 8.06 -52.49 -0.42 -0.17 16 42 H 0.14 0.22 6.68 -52.49 -0.35 -0.13 16 43 H 0.11 -0.01 7.96 -51.93 -0.41 -0.43 16 44 H 0.38 -1.24 8.70 45.56 0.40 -0.84 16 45 H -0.25 -0.49 7.11 56.52 0.40 -0.09 16 46 H -0.25 -0.41 6.78 56.52 0.38 -0.03 16 LS Contribution 348.68 15.07 5.25 5.25 Total: 0.00 -6.85 348.68 -9.45 -16.30 By element: Atomic # 1 Polarization: -5.94 SS G_CDS: -6.17 Total: -12.10 kcal Atomic # 6 Polarization: -0.32 SS G_CDS: -2.02 Total: -2.34 kcal Atomic # 7 Polarization: 0.94 SS G_CDS: -0.44 Total: 0.50 kcal Atomic # 8 Polarization: -1.06 SS G_CDS: -0.75 Total: -1.82 kcal Atomic # 14 Polarization: -0.48 SS G_CDS: -5.32 Total: -5.80 kcal Total LS contribution 5.25 Total: 5.25 kcal Total: -6.85 -9.45 -16.30 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_12360566.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -6.647 kcal (2) G-P(sol) polarization free energy of solvation -6.849 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -13.496 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.455 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.304 kcal (6) G-S(sol) free energy of system = (1) + (5) -22.951 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds