Wall clock time and date at job start Tue Mar 9 2021 12:50:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.38213 * 120.00251 * 2 1 4 4 C 1.38264 * 119.99719 * 180.23420 * 3 2 1 5 5 C 1.50698 * 119.99610 * 179.80725 * 4 3 2 6 6 H 1.09000 * 112.85395 * 348.53006 * 5 4 3 7 7 C 1.53784 * 113.61388 * 119.72710 * 5 4 3 8 8 C 1.53778 * 87.08198 * 140.06613 * 7 5 4 9 9 H 1.09007 * 113.61318 * 219.93617 * 8 7 5 10 10 N 1.46494 * 113.61459 * 89.11799 * 8 7 5 11 11 C 1.34778 * 119.99835 * 156.52920 * 10 8 7 12 12 O 1.21696 * 120.00215 * 359.97438 * 11 10 8 13 13 C 1.46436 * 119.99894 * 180.02562 * 11 10 8 14 14 C 1.34806 * 119.99593 * 180.02562 * 13 11 10 15 15 C 1.47215 * 119.99742 * 179.97438 * 14 13 11 16 16 C 1.39835 * 120.16558 * 0.25578 * 15 14 13 17 17 C 1.37893 * 119.82392 * 180.23040 * 16 15 14 18 18 C 1.38403 * 120.16807 * 359.51074 * 17 16 15 19 19 C 1.50699 * 119.82533 * 180.23484 * 18 17 16 20 20 O 1.42901 * 109.47444 * 299.99891 * 19 18 17 21 21 Si 1.86307 * 109.47043 * 180.02562 * 19 18 17 22 22 C 1.38404 * 120.34900 * 0.25594 * 18 17 16 23 23 C 1.37896 * 120.16551 * 359.97438 * 22 18 17 24 24 C 1.53783 * 87.17253 * 334.52453 * 8 7 5 25 25 C 1.38204 * 120.00005 * 359.53601 * 4 3 2 26 26 C 1.38259 * 120.00273 * 0.27740 * 25 4 3 27 27 C 1.38212 * 119.99643 * 359.97438 * 26 25 4 28 28 H 1.09000 * 109.47113 * 270.16793 * 1 2 3 29 29 H 1.09005 * 109.46779 * 30.16444 * 1 2 3 30 30 H 1.08999 * 109.47317 * 150.16596 * 1 2 3 31 31 H 1.08001 * 120.00001 * 0.04233 * 3 2 1 32 32 H 1.09002 * 113.61093 * 25.51317 * 7 5 4 33 33 H 1.09001 * 113.61317 * 254.61629 * 7 5 4 34 34 H 0.96995 * 120.00142 * 336.52427 * 10 8 7 35 35 H 1.07996 * 119.99567 * 359.97438 * 13 11 10 36 36 H 1.07996 * 120.00310 * 359.97438 * 14 13 11 37 37 H 1.08004 * 120.09366 * 0.02562 * 16 15 14 38 38 H 1.08002 * 119.91884 * 179.79492 * 17 16 15 39 39 H 1.09003 * 109.47262 * 60.00404 * 19 18 17 40 40 H 0.96701 * 113.99932 * 300.00363 * 20 19 18 41 41 H 1.48494 * 109.99900 * 58.68055 * 21 19 18 42 42 H 1.48495 * 109.99890 * 180.02562 * 21 19 18 43 43 H 1.07992 * 119.92040 * 179.97438 * 22 18 17 44 44 H 1.08002 * 120.08154 * 180.02562 * 23 22 18 45 45 H 1.09000 * 113.61445 * 140.02517 * 24 8 7 46 46 H 1.08998 * 113.61658 * 270.92737 * 24 8 7 47 47 H 1.08004 * 119.99834 * 180.25492 * 25 4 3 48 48 H 1.07997 * 120.00068 * 179.97438 * 26 25 4 49 49 H 1.07999 * 119.99536 * 179.97438 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1981 1.1969 0.0000 4 6 3.5808 1.1968 -0.0049 5 6 4.3343 2.5019 -0.0093 6 1 3.6928 3.3604 -0.2079 7 6 5.2517 2.6876 1.2109 8 6 6.2802 3.3003 0.2456 9 1 7.3074 3.0014 0.4547 10 7 6.1329 4.7475 0.0724 11 6 7.1844 5.4885 -0.3298 12 8 8.2563 4.9554 -0.5487 13 6 7.0373 6.9352 -0.5024 14 6 8.0890 7.6762 -0.9052 15 6 7.9410 9.1305 -1.0793 16 6 6.7127 9.7476 -0.8226 17 6 6.5807 11.1096 -0.9926 18 6 7.6627 11.8670 -1.4062 19 6 7.5112 13.3557 -1.5844 20 8 6.5074 13.6183 -2.5669 21 14 9.1327 14.0823 -2.1447 22 6 8.8830 11.2643 -1.6576 23 6 9.0295 9.9026 -1.4968 24 6 5.6131 2.4755 -0.8678 25 6 4.2717 -0.0001 -0.0001 26 6 3.5804 -1.1974 0.0038 27 6 2.1983 -1.1973 0.0034 28 1 -0.3633 0.0030 1.0277 29 1 -0.3633 0.8886 -0.5164 30 1 -0.3634 -0.8914 -0.5112 31 1 1.6582 2.1323 0.0007 32 1 5.5781 1.7489 1.6586 33 1 4.8652 3.3955 1.9440 34 1 5.2787 5.1724 0.2471 35 1 6.0862 7.4082 -0.3078 36 1 9.0399 7.2030 -1.1002 37 1 5.8687 9.1585 -0.4953 38 1 5.6318 11.5873 -0.7980 39 1 7.2186 13.8072 -0.6364 40 1 6.7020 13.2450 -3.4375 41 1 9.5579 13.4521 -3.4202 42 1 8.9967 15.5502 -2.3234 43 1 9.7226 11.8619 -1.9805 44 1 9.9825 9.4338 -1.6929 45 1 5.5182 3.0123 -1.8117 46 1 6.0382 1.4790 -0.9874 47 1 5.3517 -0.0002 0.0002 48 1 4.1203 -2.1327 0.0071 49 1 1.6583 -2.1326 0.0061 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9650858_12360594.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:50:23 Heat of formation + Delta-G solvation = 20.788235 kcal Electronic energy + Delta-G solvation = -28047.056973 eV Core-core repulsion = 24099.097666 eV Total energy + Delta-G solvation = -3947.959307 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.167 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -41.58135 -40.77564 -40.25267 -38.89198 -37.91553 -35.12135 -34.67822 -33.33670 -32.18162 -31.96499 -31.27457 -27.87959 -27.39233 -26.74791 -26.12213 -24.25951 -23.95405 -23.06783 -22.32244 -21.81638 -20.52519 -19.83121 -18.71974 -18.54329 -17.69786 -17.15776 -16.97134 -16.55092 -16.31890 -16.29659 -16.10082 -15.95761 -15.74674 -15.36456 -14.94092 -14.86207 -14.76638 -14.67493 -14.33244 -14.04133 -14.03402 -13.91030 -13.75492 -13.54506 -13.50083 -13.11717 -12.95777 -12.80146 -12.68546 -12.27355 -12.19048 -12.15521 -11.74334 -11.69055 -11.68616 -11.38043 -11.19695 -10.93097 -10.66821 -10.08076 -10.07087 -9.66824 -9.44157 -9.31134 -5.01006 -0.59757 0.30139 0.43379 0.49941 0.86836 1.22452 1.54810 1.91659 2.11769 2.26382 2.74195 2.79710 3.28155 3.40756 3.47900 3.60403 3.63034 3.67070 3.69764 3.84499 3.87832 3.96791 4.02918 4.08146 4.11442 4.11918 4.22896 4.23492 4.39312 4.44449 4.46439 4.51944 4.60596 4.68124 4.69993 4.73179 4.78518 4.80401 4.86110 4.87529 4.95695 4.97230 5.00570 5.07097 5.10971 5.16840 5.25296 5.31143 5.37762 5.53853 5.56219 5.59298 5.70615 5.74423 5.80293 6.12455 6.32307 6.49180 7.24117 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.084 4.084 3 C -0.118 4.118 4 C -0.067 4.067 5 C -0.073 4.073 6 H 0.096 0.904 7 C -0.135 4.135 8 C 0.119 3.881 9 H 0.105 0.895 10 N -0.709 5.709 11 C 0.551 3.449 12 O -0.541 6.541 13 C -0.215 4.215 14 C -0.015 4.015 15 C -0.073 4.073 16 C -0.100 4.100 17 C -0.095 4.095 18 C -0.106 4.106 19 C -0.077 4.077 20 O -0.529 6.529 21 Si 0.684 3.316 22 C -0.119 4.119 23 C -0.088 4.088 24 C -0.143 4.143 25 C -0.123 4.123 26 C -0.113 4.113 27 C -0.125 4.125 28 H 0.071 0.929 29 H 0.066 0.934 30 H 0.067 0.933 31 H 0.120 0.880 32 H 0.099 0.901 33 H 0.076 0.924 34 H 0.402 0.598 35 H 0.130 0.870 36 H 0.139 0.861 37 H 0.130 0.870 38 H 0.130 0.870 39 H 0.120 0.880 40 H 0.377 0.623 41 H -0.260 1.260 42 H -0.256 1.256 43 H 0.131 0.869 44 H 0.134 0.866 45 H 0.074 0.926 46 H 0.095 0.905 47 H 0.122 0.878 48 H 0.122 0.878 49 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.533 0.347 1.935 2.493 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.084 4.084 3 C -0.136 4.136 4 C -0.067 4.067 5 C -0.092 4.092 6 H 0.114 0.886 7 C -0.173 4.173 8 C 0.014 3.986 9 H 0.123 0.877 10 N -0.360 5.360 11 C 0.340 3.660 12 O -0.419 6.419 13 C -0.235 4.235 14 C -0.034 4.034 15 C -0.073 4.073 16 C -0.118 4.118 17 C -0.113 4.113 18 C -0.106 4.106 19 C -0.187 4.187 20 O -0.335 6.335 21 Si 0.585 3.415 22 C -0.136 4.136 23 C -0.106 4.106 24 C -0.182 4.182 25 C -0.141 4.141 26 C -0.131 4.131 27 C -0.143 4.143 28 H 0.089 0.911 29 H 0.085 0.915 30 H 0.086 0.914 31 H 0.138 0.862 32 H 0.117 0.883 33 H 0.095 0.905 34 H 0.236 0.764 35 H 0.148 0.852 36 H 0.156 0.844 37 H 0.147 0.853 38 H 0.148 0.852 39 H 0.138 0.862 40 H 0.224 0.776 41 H -0.184 1.184 42 H -0.181 1.181 43 H 0.149 0.851 44 H 0.152 0.848 45 H 0.093 0.907 46 H 0.114 0.886 47 H 0.140 0.860 48 H 0.140 0.860 49 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -0.627 0.710 1.658 1.909 hybrid contribution -1.352 -0.253 -0.791 1.586 sum -1.979 0.457 0.867 2.208 Atomic orbital electron populations 1.20817 0.91130 1.02912 1.02469 1.19947 0.96148 0.93164 0.99122 1.20930 0.93513 0.97567 1.01557 1.19649 0.93377 0.94357 0.99347 1.21635 0.95028 0.95217 0.97285 0.88574 1.23413 0.95689 1.01922 0.96236 1.21847 1.00622 0.79721 0.96425 0.87703 1.45551 1.13734 1.07467 1.69241 1.18335 0.83704 0.87371 0.76573 1.90837 1.26778 1.73852 1.50472 1.22881 1.00665 0.92955 1.07021 1.22415 0.99077 0.91294 0.90642 1.19073 0.94244 0.92710 1.01289 1.21468 0.96821 0.94814 0.98652 1.20971 0.98728 0.93374 0.98213 1.20476 0.94147 0.96276 0.99749 1.25076 1.03154 0.94179 0.96295 1.86607 1.45115 1.78982 1.22832 0.94972 0.79990 0.79892 0.86615 1.20977 0.96753 0.95011 1.00863 1.21355 0.98403 0.93375 0.97425 1.23608 0.95281 1.01179 0.98127 1.20992 0.99907 0.91934 1.01266 1.21151 0.94320 0.98066 0.99539 1.21073 0.94364 0.97599 1.01310 0.91056 0.91501 0.91441 0.86247 0.88305 0.90489 0.76350 0.85217 0.84377 0.85255 0.85220 0.86192 0.77574 1.18436 1.18116 0.85149 0.84818 0.90735 0.88624 0.85997 0.85984 0.86137 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.09 10.01 36.01 0.36 0.45 16 2 C -0.08 -0.08 5.88 -104.62 -0.62 -0.70 16 3 C -0.12 -0.09 9.37 -39.58 -0.37 -0.46 16 4 C -0.07 -0.03 5.29 -104.63 -0.55 -0.58 16 5 C -0.07 0.09 3.87 -90.82 -0.35 -0.26 16 6 H 0.10 -0.20 8.09 -51.93 -0.42 -0.62 16 7 C -0.13 0.22 7.29 -25.92 -0.19 0.03 16 8 C 0.12 -0.04 4.29 -67.12 -0.29 -0.33 16 9 H 0.10 0.15 7.50 -51.93 -0.39 -0.24 16 10 N -0.71 0.49 5.26 -54.40 -0.29 0.20 16 11 C 0.55 1.02 7.74 -12.96 -0.10 0.92 16 12 O -0.54 -3.18 15.85 5.19 0.08 -3.10 16 13 C -0.21 0.08 9.41 -37.50 -0.35 -0.28 16 14 C -0.01 0.00 9.46 -37.15 -0.35 -0.35 16 15 C -0.07 0.02 5.87 -105.06 -0.62 -0.60 16 16 C -0.10 0.08 9.41 -39.11 -0.37 -0.29 16 17 C -0.09 0.04 9.59 -39.65 -0.38 -0.34 16 18 C -0.11 0.06 5.40 -104.50 -0.56 -0.51 16 19 C -0.08 0.06 2.82 36.01 0.10 0.17 16 20 O -0.53 -0.37 12.76 -35.23 -0.45 -0.82 16 21 Si 0.68 -0.93 29.77 -169.99 -5.06 -5.99 16 22 C -0.12 0.12 8.65 -39.65 -0.34 -0.22 16 23 C -0.09 0.07 9.80 -39.11 -0.38 -0.32 16 24 C -0.14 0.07 7.27 -25.78 -0.19 -0.12 16 25 C -0.12 -0.07 8.62 -39.59 -0.34 -0.41 16 26 C -0.11 -0.09 10.05 -39.58 -0.40 -0.49 16 27 C -0.13 -0.13 9.70 -39.58 -0.38 -0.51 16 28 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 29 H 0.07 -0.09 8.09 -51.93 -0.42 -0.51 16 30 H 0.07 -0.08 8.09 -51.93 -0.42 -0.50 16 31 H 0.12 -0.08 8.06 -52.49 -0.42 -0.50 16 32 H 0.10 -0.15 7.72 -51.93 -0.40 -0.55 16 33 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 34 H 0.40 -1.34 8.68 -40.82 -0.35 -1.69 16 35 H 0.13 -0.39 6.07 -52.49 -0.32 -0.71 16 36 H 0.14 0.09 7.52 -52.49 -0.39 -0.31 16 37 H 0.13 -0.35 6.17 -52.48 -0.32 -0.67 16 38 H 0.13 -0.13 8.06 -52.49 -0.42 -0.56 16 39 H 0.12 -0.19 7.96 -51.93 -0.41 -0.60 16 40 H 0.38 -0.76 8.70 45.56 0.40 -0.36 16 41 H -0.26 -0.17 7.11 56.52 0.40 0.24 16 42 H -0.26 -0.53 7.11 56.52 0.40 -0.12 16 43 H 0.13 -0.35 4.85 -52.49 -0.25 -0.60 16 44 H 0.13 -0.32 8.06 -52.49 -0.42 -0.75 16 45 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 46 H 0.10 -0.06 6.33 -51.93 -0.33 -0.39 16 47 H 0.12 -0.10 6.67 -52.48 -0.35 -0.45 16 48 H 0.12 -0.10 8.06 -52.49 -0.42 -0.52 16 49 H 0.12 -0.05 8.06 -52.49 -0.42 -0.47 16 LS Contribution 404.78 15.07 6.10 6.10 Total: 0.00 -7.92 404.78 -13.26 -21.19 By element: Atomic # 1 Polarization: -5.40 SS G_CDS: -6.97 Total: -12.37 kcal Atomic # 6 Polarization: 1.48 SS G_CDS: -6.68 Total: -5.20 kcal Atomic # 7 Polarization: 0.49 SS G_CDS: -0.29 Total: 0.20 kcal Atomic # 8 Polarization: -3.55 SS G_CDS: -0.37 Total: -3.92 kcal Atomic # 14 Polarization: -0.93 SS G_CDS: -5.06 Total: -5.99 kcal Total LS contribution 6.10 Total: 6.10 kcal Total: -7.92 -13.26 -21.19 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9650858_12360594.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 41.974 kcal (2) G-P(sol) polarization free energy of solvation -7.924 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 34.051 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.262 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.186 kcal (6) G-S(sol) free energy of system = (1) + (5) 20.788 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds