Wall clock time and date at job start Tue Mar 9 2021 12:50:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.38208 * 120.00175 * 2 1 4 4 C 1.38258 * 120.00064 * 180.29366 * 3 2 1 5 5 C 1.50698 * 120.00512 * 179.74425 * 4 3 2 6 6 H 1.09007 * 112.84511 * 10.92466 * 5 4 3 7 7 C 1.54043 * 113.69846 * 142.19649 * 5 4 3 8 8 C 1.53777 * 86.98643 * 139.99572 * 7 5 4 9 9 H 1.09002 * 113.61307 * 219.98108 * 8 7 5 10 10 N 1.46494 * 113.61835 * 89.16244 * 8 7 5 11 11 C 1.34785 * 120.00447 * 105.86342 * 10 8 7 12 12 O 1.21577 * 119.99419 * 0.02562 * 11 10 8 13 13 C 1.47663 * 120.00347 * 180.02562 * 11 10 8 14 14 C 1.40005 * 120.45157 * 353.97732 * 13 11 10 15 15 N 1.31310 * 121.37009 * 179.97438 * 14 13 11 16 16 C 1.32818 * 121.89287 * 359.97438 * 15 14 13 17 17 N 1.37156 * 132.96024 * 180.02562 * 16 15 14 18 18 C 1.36943 * 110.11111 * 180.02562 * 17 16 15 19 19 C 1.34181 * 109.95630 * 359.97438 * 18 17 16 20 20 C 1.50694 * 126.60216 * 180.02562 * 19 18 17 21 21 O 1.42904 * 109.46936 * 105.02557 * 20 19 18 22 22 Si 1.86302 * 109.47222 * 345.02653 * 20 19 18 23 23 C 1.41015 * 120.08431 * 0.29872 * 16 15 14 24 24 C 1.39285 * 119.61688 * 359.40311 * 23 16 15 25 25 C 1.50704 * 121.03102 * 180.27013 * 24 23 16 26 26 C 1.53780 * 87.17419 * 334.57029 * 8 7 5 27 27 C 1.38213 * 119.99958 * 359.47588 * 4 3 2 28 28 C 1.38254 * 119.99870 * 0.25400 * 27 4 3 29 29 C 1.38213 * 120.00299 * 0.02562 * 28 27 4 30 30 H 1.09005 * 109.47253 * 270.23317 * 1 2 3 31 31 H 1.09001 * 109.47110 * 30.22949 * 1 2 3 32 32 H 1.08996 * 109.47422 * 150.23074 * 1 2 3 33 33 H 1.08005 * 120.00470 * 0.04767 * 3 2 1 34 34 H 1.08998 * 113.61400 * 25.48784 * 7 5 4 35 35 H 1.09002 * 113.69707 * 254.51254 * 7 5 4 36 36 H 0.96996 * 120.00287 * 285.86537 * 10 8 7 37 37 H 1.07996 * 119.31510 * 359.95117 * 14 13 11 38 38 H 0.97002 * 124.94547 * 0.02684 * 17 16 15 39 39 H 1.08007 * 125.02347 * 179.97438 * 18 17 16 40 40 H 1.08998 * 109.47489 * 225.02561 * 20 19 18 41 41 H 0.96697 * 114.00403 * 299.99539 * 21 20 19 42 42 H 1.48496 * 110.00202 * 179.97438 * 22 20 19 43 43 H 1.48500 * 110.00000 * 301.32350 * 22 20 19 44 44 H 1.09007 * 109.46790 * 264.02950 * 25 24 23 45 45 H 1.09002 * 109.47313 * 24.02677 * 25 24 23 46 46 H 1.09003 * 109.46985 * 144.02802 * 25 24 23 47 47 H 1.08999 * 113.61435 * 140.02334 * 26 8 7 48 48 H 1.09001 * 113.61637 * 270.84769 * 26 8 7 49 49 H 1.07998 * 120.00474 * 180.26769 * 27 4 3 50 50 H 1.08003 * 120.00366 * 179.97438 * 28 27 4 51 51 H 1.07996 * 120.00475 * 179.97438 * 29 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1980 1.1969 0.0000 4 6 3.5806 1.1969 -0.0061 5 6 4.3342 2.5019 -0.0120 6 1 3.6925 3.3620 0.1796 7 6 5.6128 2.4823 0.8470 8 6 6.2801 3.2983 -0.2727 9 1 7.3073 2.9977 -0.4791 10 7 6.1328 4.7468 -0.1110 11 6 7.1842 5.4911 0.2857 12 8 8.2549 4.9602 0.5088 13 6 7.0355 6.9511 0.4492 14 6 5.8468 7.5895 0.0758 15 7 5.6950 8.8865 0.2138 16 6 6.6555 9.6563 0.7125 17 7 6.7430 11.0037 0.9536 18 6 7.9677 11.3085 1.4852 19 6 8.7045 10.1936 1.6066 20 6 10.1075 10.0984 2.1482 21 8 10.0736 9.5399 3.4631 22 14 10.8640 11.7996 2.2154 23 6 7.8844 9.0876 1.1062 24 6 8.0789 7.7141 0.9803 25 6 9.3772 7.0720 1.3967 26 6 5.2519 2.6780 -1.2333 27 6 4.2717 -0.0001 -0.0013 28 6 3.5804 -1.1974 0.0043 29 6 2.1982 -1.1974 0.0046 30 1 -0.3634 0.0042 1.0277 31 1 -0.3633 0.8879 -0.5174 32 1 -0.3634 -0.8920 -0.5102 33 1 1.6581 2.1323 0.0008 34 1 6.0379 1.4868 0.9746 35 1 5.5176 3.0266 1.7866 36 1 5.2786 5.1704 -0.2893 37 1 5.0380 7.0032 -0.3346 38 1 6.0396 11.6471 0.7738 39 1 8.2926 12.2997 1.7653 40 1 10.7056 9.4602 1.4977 41 1 9.5576 10.0568 4.0969 42 1 12.2477 11.7194 2.7485 43 1 10.8759 12.4041 0.8591 44 1 10.0231 6.9604 0.5257 45 1 9.8718 7.6998 2.1379 46 1 9.1756 6.0912 1.8276 47 1 4.8656 3.3801 -1.9722 48 1 5.5790 1.7365 -1.6746 49 1 5.3516 -0.0002 -0.0017 50 1 4.1203 -2.1327 0.0077 51 1 1.6582 -2.1326 0.0086 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9650858_12890568.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:50:48 Heat of formation + Delta-G solvation = 55.895343 kcal Electronic energy + Delta-G solvation = -33392.143946 eV Core-core repulsion = 29031.091416 eV Total energy + Delta-G solvation = -4361.052529 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 378.173 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -42.84525 -41.56969 -40.47254 -39.17828 -38.44578 -37.74025 -35.15941 -34.58140 -33.36740 -32.08078 -31.85428 -30.75305 -28.77258 -27.81262 -26.71715 -26.66515 -26.08185 -24.63225 -23.91496 -23.04309 -22.17478 -21.75037 -20.68359 -19.87918 -19.27692 -18.74883 -17.79532 -17.54899 -17.48388 -17.03173 -16.68145 -16.51135 -16.22775 -16.08539 -15.89342 -15.54167 -15.50757 -15.28457 -14.89746 -14.75556 -14.55453 -14.43575 -14.08958 -14.03981 -13.95215 -13.77894 -13.66369 -13.52063 -13.46743 -13.18580 -13.10160 -12.98675 -12.70554 -12.65681 -12.27511 -12.16126 -12.05807 -11.70202 -11.65295 -11.16799 -11.05975 -11.01583 -10.47420 -10.17797 -10.05949 -9.64375 -9.58677 -9.41276 -9.13586 -5.13315 -0.22427 -0.05262 0.45858 0.52468 1.23566 1.37888 1.56677 1.64664 1.92845 1.94780 2.07382 2.81792 2.86042 3.27333 3.44031 3.44632 3.51443 3.60665 3.65400 3.69237 3.74032 3.80274 3.91014 3.99302 4.05444 4.09033 4.14915 4.23318 4.25459 4.28191 4.46727 4.50682 4.54766 4.63147 4.66881 4.71479 4.71941 4.74006 4.77496 4.83961 4.89800 4.96428 4.98341 5.00652 5.07381 5.12151 5.19226 5.20882 5.27688 5.42970 5.51424 5.61688 5.62386 5.73079 5.76942 5.78983 6.09891 6.14925 6.48734 6.60575 6.85664 7.26297 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.084 4.084 3 C -0.117 4.117 4 C -0.067 4.067 5 C -0.074 4.074 6 H 0.096 0.904 7 C -0.143 4.143 8 C 0.122 3.878 9 H 0.106 0.894 10 N -0.711 5.711 11 C 0.575 3.425 12 O -0.527 6.527 13 C -0.234 4.234 14 C 0.180 3.820 15 N -0.504 5.504 16 C 0.307 3.693 17 N -0.570 5.570 18 C 0.070 3.930 19 C -0.181 4.181 20 C -0.036 4.036 21 O -0.538 6.538 22 Si 0.686 3.314 23 C -0.149 4.149 24 C 0.085 3.915 25 C -0.134 4.134 26 C -0.135 4.135 27 C -0.123 4.123 28 C -0.113 4.113 29 C -0.125 4.125 30 H 0.071 0.929 31 H 0.066 0.934 32 H 0.066 0.934 33 H 0.120 0.880 34 H 0.096 0.904 35 H 0.075 0.925 36 H 0.399 0.601 37 H 0.162 0.838 38 H 0.426 0.574 39 H 0.186 0.814 40 H 0.116 0.884 41 H 0.378 0.622 42 H -0.252 1.252 43 H -0.255 1.255 44 H 0.080 0.920 45 H 0.084 0.916 46 H 0.099 0.901 47 H 0.077 0.923 48 H 0.099 0.901 49 H 0.122 0.878 50 H 0.122 0.878 51 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.574 3.835 0.820 5.306 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.084 4.084 3 C -0.135 4.135 4 C -0.067 4.067 5 C -0.092 4.092 6 H 0.115 0.885 7 C -0.182 4.182 8 C 0.016 3.984 9 H 0.124 0.876 10 N -0.363 5.363 11 C 0.363 3.637 12 O -0.404 6.404 13 C -0.241 4.241 14 C 0.012 3.988 15 N -0.217 5.217 16 C 0.074 3.926 17 N -0.176 5.176 18 C -0.056 4.056 19 C -0.189 4.189 20 C -0.147 4.147 21 O -0.343 6.343 22 Si 0.587 3.413 23 C -0.156 4.156 24 C 0.077 3.923 25 C -0.190 4.190 26 C -0.173 4.173 27 C -0.141 4.141 28 C -0.131 4.131 29 C -0.143 4.143 30 H 0.089 0.911 31 H 0.085 0.915 32 H 0.085 0.915 33 H 0.138 0.862 34 H 0.114 0.886 35 H 0.093 0.907 36 H 0.234 0.766 37 H 0.179 0.821 38 H 0.264 0.736 39 H 0.203 0.797 40 H 0.133 0.867 41 H 0.225 0.775 42 H -0.177 1.177 43 H -0.180 1.180 44 H 0.098 0.902 45 H 0.103 0.897 46 H 0.117 0.883 47 H 0.095 0.905 48 H 0.117 0.883 49 H 0.140 0.860 50 H 0.140 0.860 51 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges -2.590 4.119 0.173 4.869 hybrid contribution -0.439 -0.407 -0.382 0.710 sum -3.029 3.712 -0.209 4.796 Atomic orbital electron populations 1.20815 0.91152 1.02893 1.02465 1.19945 0.96136 0.93174 0.99151 1.20931 0.93525 0.97567 1.01520 1.19652 0.93373 0.94367 0.99311 1.21641 0.95055 0.95226 0.97283 0.88542 1.23611 0.95241 1.01217 0.98131 1.21839 1.00699 0.79382 0.96448 0.87572 1.45566 1.13588 1.07341 1.69815 1.17864 0.83748 0.85738 0.76383 1.90762 1.26450 1.73513 1.49672 1.20419 0.97360 0.94260 1.12056 1.22496 0.94866 0.88519 0.92956 1.66433 1.31096 1.05861 1.18284 1.18496 0.91245 0.85424 0.97408 1.41512 1.15553 1.05610 1.54878 1.21729 0.84360 0.99423 1.00119 1.20680 0.97865 0.91348 1.08966 1.24462 0.94522 1.09794 0.85964 1.86516 1.75470 1.53925 1.18412 0.95307 0.83422 0.77997 0.84540 1.19480 0.95566 0.93272 1.07302 1.19925 0.94935 0.90280 0.87158 1.21279 0.92588 1.02686 1.02409 1.23417 0.95695 1.01929 0.96258 1.20991 0.99908 0.91926 1.01252 1.21148 0.94318 0.98067 0.99575 1.21069 0.94361 0.97583 1.01333 0.91076 0.91494 0.91460 0.86227 0.88608 0.90661 0.76562 0.82144 0.73575 0.79706 0.86715 0.77461 1.17670 1.17967 0.90163 0.89745 0.88285 0.90468 0.88279 0.85987 0.86012 0.86169 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.07 10.01 36.00 0.36 0.43 16 2 C -0.08 -0.09 5.88 -104.63 -0.62 -0.71 16 3 C -0.12 -0.10 9.37 -39.59 -0.37 -0.47 16 4 C -0.07 -0.04 5.29 -104.62 -0.55 -0.59 16 5 C -0.07 0.09 3.87 -90.82 -0.35 -0.27 16 6 H 0.10 -0.19 8.09 -51.92 -0.42 -0.61 16 7 C -0.14 0.07 7.27 -25.78 -0.19 -0.12 16 8 C 0.12 -0.04 4.29 -67.12 -0.29 -0.33 16 9 H 0.11 0.13 7.50 -51.93 -0.39 -0.26 16 10 N -0.71 0.23 5.22 -54.02 -0.28 -0.05 16 11 C 0.57 1.53 7.72 -12.41 -0.10 1.43 16 12 O -0.53 -2.98 13.11 5.30 0.07 -2.91 16 13 C -0.23 -0.57 5.89 -104.82 -0.62 -1.18 16 14 C 0.18 0.19 10.67 -17.11 -0.18 0.01 16 15 N -0.50 -1.29 10.37 -11.96 -0.12 -1.42 16 16 C 0.31 0.68 8.42 -155.71 -1.31 -0.64 16 17 N -0.57 0.64 6.04 -12.12 -0.07 0.57 16 18 C 0.07 -0.16 10.44 -16.70 -0.17 -0.34 16 19 C -0.18 -0.01 5.57 -102.73 -0.57 -0.58 16 20 C -0.04 0.02 1.88 36.00 0.07 0.09 16 21 O -0.54 0.11 11.66 -35.23 -0.41 -0.30 16 22 Si 0.69 -1.54 30.77 -169.99 -5.23 -6.77 16 23 C -0.15 -0.39 6.16 -105.13 -0.65 -1.03 16 24 C 0.09 0.28 5.98 -103.67 -0.62 -0.33 16 25 C -0.13 -0.44 8.46 36.01 0.30 -0.14 16 26 C -0.14 0.22 7.29 -25.92 -0.19 0.03 16 27 C -0.12 -0.08 8.62 -39.58 -0.34 -0.42 16 28 C -0.11 -0.10 10.05 -39.58 -0.40 -0.50 16 29 C -0.13 -0.14 9.70 -39.58 -0.38 -0.53 16 30 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 31 H 0.07 -0.08 8.09 -51.93 -0.42 -0.50 16 32 H 0.07 -0.08 8.09 -51.93 -0.42 -0.50 16 33 H 0.12 -0.07 8.05 -52.48 -0.42 -0.49 16 34 H 0.10 -0.06 6.33 -51.93 -0.33 -0.39 16 35 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 36 H 0.40 -1.11 6.78 -40.82 -0.28 -1.39 16 37 H 0.16 -0.40 6.43 -52.49 -0.34 -0.74 16 38 H 0.43 -1.58 8.96 -40.82 -0.37 -1.94 16 39 H 0.19 -1.19 6.35 -52.48 -0.33 -1.52 16 40 H 0.12 0.06 7.13 -51.93 -0.37 -0.31 16 41 H 0.38 -1.57 8.70 45.56 0.40 -1.18 16 42 H -0.25 -0.35 7.11 56.52 0.40 0.05 16 43 H -0.26 -0.06 7.11 56.52 0.40 0.34 16 44 H 0.08 0.27 8.14 -51.93 -0.42 -0.16 16 45 H 0.08 0.25 4.79 -51.93 -0.25 0.00 16 46 H 0.10 0.46 5.96 -51.93 -0.31 0.15 16 47 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 48 H 0.10 -0.15 7.73 -51.93 -0.40 -0.55 16 49 H 0.12 -0.09 6.67 -52.49 -0.35 -0.44 16 50 H 0.12 -0.08 8.06 -52.48 -0.42 -0.51 16 51 H 0.12 -0.03 8.06 -52.49 -0.42 -0.46 16 LS Contribution 408.52 15.07 6.16 6.16 Total: 0.00 -9.97 408.52 -13.79 -23.77 By element: Atomic # 1 Polarization: -6.14 SS G_CDS: -6.73 Total: -12.87 kcal Atomic # 6 Polarization: 0.99 SS G_CDS: -7.17 Total: -6.17 kcal Atomic # 7 Polarization: -0.42 SS G_CDS: -0.48 Total: -0.90 kcal Atomic # 8 Polarization: -2.86 SS G_CDS: -0.34 Total: -3.20 kcal Atomic # 14 Polarization: -1.54 SS G_CDS: -5.23 Total: -6.77 kcal Total LS contribution 6.16 Total: 6.16 kcal Total: -9.97 -13.79 -23.77 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9650858_12890568.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 79.661 kcal (2) G-P(sol) polarization free energy of solvation -9.974 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 69.687 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.792 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.766 kcal (6) G-S(sol) free energy of system = (1) + (5) 55.895 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds