Wall clock time and date at job start Tue Mar 9 2021 12:50:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.38206 * 120.00509 * 2 1 4 4 C 1.38260 * 120.00308 * 180.29572 * 3 2 1 5 5 C 1.50700 * 120.00402 * 179.74657 * 4 3 2 6 6 H 1.09002 * 112.84338 * 348.52712 * 5 4 3 7 7 C 1.53779 * 113.61530 * 119.72910 * 5 4 3 8 8 C 1.53782 * 87.08091 * 139.98201 * 7 5 4 9 9 H 1.08995 * 113.60923 * 219.93513 * 8 7 5 10 10 N 1.46496 * 113.61418 * 89.11226 * 8 7 5 11 11 C 1.34786 * 119.99774 * 154.99809 * 10 8 7 12 12 O 1.21641 * 119.99546 * 0.02562 * 11 10 8 13 13 C 1.47048 * 119.99942 * 180.02562 * 11 10 8 14 14 C 1.35869 * 125.42596 * 179.97438 * 13 11 10 15 15 C 1.41595 * 107.72816 * 180.02562 * 14 13 11 16 16 C 1.40060 * 133.38229 * 179.97438 * 15 14 13 17 17 C 1.36482 * 119.82907 * 179.75990 * 16 15 14 18 18 C 1.38898 * 120.61290 * 0.51843 * 17 16 15 19 19 C 1.50699 * 119.67263 * 179.73576 * 18 17 16 20 20 O 1.42903 * 109.47152 * 244.72876 * 19 18 17 21 21 Si 1.86305 * 109.47184 * 4.72348 * 19 18 17 22 22 C 1.37704 * 120.65097 * 359.45612 * 18 17 16 23 23 C 1.39194 * 119.80814 * 0.28058 * 22 18 17 24 24 N 1.37479 * 133.18706 * 179.97438 * 23 22 18 25 25 C 1.53785 * 87.08175 * 334.56416 * 8 7 5 26 26 C 1.38218 * 119.99400 * 359.47207 * 4 3 2 27 27 C 1.38258 * 120.00376 * 0.25491 * 26 4 3 28 28 C 1.38215 * 119.99565 * 0.02562 * 27 26 4 29 29 H 1.09000 * 109.47251 * 270.23721 * 1 2 3 30 30 H 1.09000 * 109.46711 * 30.23104 * 1 2 3 31 31 H 1.08998 * 109.47382 * 150.23133 * 1 2 3 32 32 H 1.08003 * 120.00305 * 0.04685 * 3 2 1 33 33 H 1.09001 * 113.61402 * 25.42978 * 7 5 4 34 34 H 1.09000 * 113.60935 * 254.53185 * 7 5 4 35 35 H 0.96995 * 120.00134 * 335.00291 * 10 8 7 36 36 H 1.07998 * 126.13301 * 0.02562 * 14 13 11 37 37 H 1.08007 * 120.08753 * 0.02562 * 16 15 14 38 38 H 1.07997 * 119.69319 * 180.24724 * 17 16 15 39 39 H 1.08997 * 109.47198 * 124.72554 * 19 18 17 40 40 H 0.96700 * 114.00311 * 180.02562 * 20 19 18 41 41 H 1.48499 * 109.99670 * 178.68093 * 21 19 18 42 42 H 1.48497 * 110.00233 * 300.00062 * 21 19 18 43 43 H 1.08001 * 120.10029 * 180.25069 * 22 18 17 44 44 H 0.97001 * 125.60263 * 0.02562 * 24 23 22 45 45 H 1.08994 * 113.61229 * 139.98135 * 25 8 7 46 46 H 1.08995 * 113.61310 * 270.89010 * 25 8 7 47 47 H 1.08005 * 119.99429 * 180.27786 * 26 4 3 48 48 H 1.07995 * 119.99936 * 180.02562 * 27 26 4 49 49 H 1.07999 * 119.99502 * 179.97438 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1982 1.1968 0.0000 4 6 3.5807 1.1968 -0.0062 5 6 4.3344 2.5018 -0.0120 6 1 3.6926 3.3602 -0.2105 7 6 5.2530 2.6881 1.2072 8 6 6.2814 3.2982 0.2402 9 1 7.3083 2.9983 0.4490 10 7 6.1357 4.7453 0.0650 11 6 7.1957 5.4889 -0.3093 12 8 8.2731 4.9583 -0.5020 13 6 7.0496 6.9416 -0.4847 14 6 8.0404 7.7936 -0.8569 15 6 7.4909 9.0975 -0.9090 16 6 8.0232 10.3539 -1.2247 17 6 7.2225 11.4586 -1.1902 18 6 5.8843 11.3514 -0.8339 19 6 5.0209 12.5860 -0.7970 20 8 4.5953 12.8297 0.5453 21 14 5.9995 14.0468 -1.4129 22 6 5.3374 10.1274 -0.5196 23 6 6.1324 8.9852 -0.5528 24 7 5.8830 7.6576 -0.2975 25 6 5.6102 2.4726 -0.8701 26 6 4.2717 -0.0003 -0.0013 27 6 3.5804 -1.1976 0.0044 28 6 2.1982 -1.1974 0.0047 29 1 -0.3634 0.0043 1.0276 30 1 -0.3633 0.8879 -0.5174 31 1 -0.3634 -0.8920 -0.5102 32 1 1.6583 2.1322 0.0008 33 1 5.5786 1.7497 1.6559 34 1 4.8678 3.3975 1.9396 35 1 5.2764 5.1683 0.2184 36 1 9.0635 7.5244 -1.0741 37 1 9.0637 10.4477 -1.4990 38 1 7.6344 12.4258 -1.4379 39 1 4.1486 12.4385 -1.4336 40 1 4.0340 13.6109 0.6443 41 1 5.1495 15.2645 -1.4114 42 1 7.1916 14.2586 -0.5531 43 1 4.2948 10.0537 -0.2477 44 1 5.0285 7.2848 -0.0297 45 1 5.5135 3.0080 -1.8145 46 1 6.0335 1.4753 -0.9891 47 1 5.3517 -0.0003 -0.0016 48 1 4.1203 -2.1329 0.0086 49 1 1.6582 -2.1327 0.0087 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9650858_13158378.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:50:56 Heat of formation + Delta-G solvation = 44.193636 kcal Electronic energy + Delta-G solvation = -30383.766812 eV Core-core repulsion = 26243.170388 eV Total energy + Delta-G solvation = -4140.596424 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 363.162 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -42.68438 -41.56551 -40.30396 -39.13128 -38.65243 -37.07884 -34.89353 -33.45652 -33.25013 -32.01230 -31.03320 -30.40883 -27.91636 -27.26186 -26.82936 -26.04253 -24.36062 -23.20960 -23.09847 -22.11354 -21.86056 -21.21614 -19.99690 -19.55461 -18.57034 -18.06452 -17.69563 -17.25744 -16.97533 -16.49601 -16.41319 -16.31664 -16.06933 -15.70900 -15.27132 -15.09136 -15.04163 -14.85306 -14.77735 -14.70063 -14.42800 -14.23406 -14.07748 -13.86946 -13.84819 -13.59881 -13.49179 -13.15483 -12.87889 -12.76710 -12.68935 -12.31432 -12.25262 -12.09730 -11.81476 -11.76209 -11.64015 -11.28664 -11.24612 -10.90438 -10.50429 -10.26588 -9.71129 -9.48421 -9.29082 -8.79324 -4.95492 -0.31361 0.39030 0.45922 0.55821 1.01589 1.26763 1.59659 1.75813 1.89067 1.96739 2.25787 2.74962 2.75593 3.30786 3.33586 3.51662 3.54838 3.60801 3.64135 3.80581 3.84789 3.92029 3.98218 4.04341 4.04763 4.18667 4.18944 4.31351 4.39369 4.40330 4.44419 4.48396 4.53199 4.59222 4.61307 4.66443 4.67403 4.71620 4.81253 4.88591 4.90786 4.92651 4.97659 4.99902 5.12033 5.21231 5.30806 5.41823 5.43803 5.55308 5.57906 5.63758 5.65989 5.69271 5.98956 6.08283 6.19587 6.34824 6.40321 6.98891 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.084 4.084 3 C -0.118 4.118 4 C -0.068 4.068 5 C -0.074 4.074 6 H 0.095 0.905 7 C -0.135 4.135 8 C 0.119 3.881 9 H 0.110 0.890 10 N -0.712 5.712 11 C 0.589 3.411 12 O -0.514 6.514 13 C 0.012 3.988 14 C -0.097 4.097 15 C -0.117 4.117 16 C -0.050 4.050 17 C -0.144 4.144 18 C -0.040 4.040 19 C -0.077 4.077 20 O -0.536 6.536 21 Si 0.688 3.312 22 C -0.104 4.104 23 C 0.116 3.884 24 N -0.579 5.579 25 C -0.143 4.143 26 C -0.123 4.123 27 C -0.112 4.112 28 C -0.125 4.125 29 H 0.071 0.929 30 H 0.066 0.934 31 H 0.067 0.933 32 H 0.119 0.881 33 H 0.101 0.899 34 H 0.076 0.924 35 H 0.396 0.604 36 H 0.159 0.841 37 H 0.133 0.867 38 H 0.130 0.870 39 H 0.076 0.924 40 H 0.380 0.620 41 H -0.262 1.262 42 H -0.254 1.254 43 H 0.125 0.875 44 H 0.416 0.584 45 H 0.075 0.925 46 H 0.098 0.902 47 H 0.123 0.877 48 H 0.123 0.877 49 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.344 0.449 -1.549 4.634 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.084 4.084 3 C -0.136 4.136 4 C -0.068 4.068 5 C -0.092 4.092 6 H 0.113 0.887 7 C -0.173 4.173 8 C 0.014 3.986 9 H 0.128 0.872 10 N -0.363 5.363 11 C 0.375 3.625 12 O -0.389 6.389 13 C -0.097 4.097 14 C -0.124 4.124 15 C -0.121 4.121 16 C -0.069 4.069 17 C -0.162 4.162 18 C -0.042 4.042 19 C -0.186 4.186 20 O -0.344 6.344 21 Si 0.589 3.411 22 C -0.124 4.124 23 C 0.007 3.993 24 N -0.184 5.184 25 C -0.181 4.181 26 C -0.141 4.141 27 C -0.130 4.130 28 C -0.143 4.143 29 H 0.090 0.910 30 H 0.085 0.915 31 H 0.086 0.914 32 H 0.137 0.863 33 H 0.119 0.881 34 H 0.095 0.905 35 H 0.230 0.770 36 H 0.177 0.823 37 H 0.151 0.849 38 H 0.147 0.853 39 H 0.094 0.906 40 H 0.228 0.772 41 H -0.188 1.188 42 H -0.179 1.179 43 H 0.143 0.857 44 H 0.254 0.746 45 H 0.094 0.906 46 H 0.117 0.883 47 H 0.140 0.860 48 H 0.141 0.859 49 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -2.977 0.171 -1.348 3.272 hybrid contribution -1.930 0.204 1.124 2.243 sum -4.908 0.375 -0.224 4.927 Atomic orbital electron populations 1.20819 0.91114 1.02934 1.02483 1.19948 0.96164 0.93160 0.99091 1.20918 0.93499 0.97562 1.01588 1.19629 0.93372 0.94291 0.99537 1.21589 0.95044 0.95289 0.97267 0.88719 1.23436 0.95579 1.02038 0.96224 1.21911 1.01044 0.78922 0.96696 0.87201 1.45552 1.12394 1.07938 1.70392 1.17178 0.84230 0.84228 0.76837 1.90882 1.26160 1.71859 1.49988 1.20047 0.87216 0.91534 1.10937 1.20980 0.99256 0.90129 1.02053 1.18220 0.92935 0.94123 1.06853 1.20357 0.99813 0.89893 0.96801 1.20468 0.92955 0.98830 1.03980 1.18912 0.93508 0.92580 0.99217 1.24825 1.02531 1.03823 0.87426 1.86601 1.71426 1.50337 1.25995 0.94869 0.80168 0.75764 0.90248 1.19828 0.99406 0.89228 1.03982 1.18271 0.95220 0.84200 1.01659 1.41867 1.10796 1.05568 1.60149 1.23572 0.95186 1.01294 0.98079 1.20995 0.99918 0.91917 1.01241 1.21157 0.94320 0.98086 0.99467 1.21082 0.94370 0.97611 1.01192 0.91047 0.91511 0.91401 0.86301 0.88058 0.90534 0.76984 0.82332 0.84886 0.85276 0.90557 0.77242 1.18791 1.17872 0.85714 0.74571 0.90622 0.88338 0.85952 0.85932 0.86098 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.12 10.01 36.01 0.36 0.48 16 2 C -0.08 -0.06 5.88 -104.63 -0.62 -0.67 16 3 C -0.12 -0.05 9.37 -39.59 -0.37 -0.42 16 4 C -0.07 0.00 5.29 -104.62 -0.55 -0.55 16 5 C -0.07 0.13 3.86 -90.96 -0.35 -0.22 16 6 H 0.09 -0.25 8.09 -51.93 -0.42 -0.67 16 7 C -0.13 0.29 7.29 -25.92 -0.19 0.10 16 8 C 0.12 -0.11 4.32 -67.12 -0.29 -0.40 16 9 H 0.11 0.07 7.46 -51.93 -0.39 -0.32 16 10 N -0.71 0.74 5.26 -54.21 -0.29 0.46 16 11 C 0.59 1.21 7.80 -12.68 -0.10 1.11 16 12 O -0.51 -2.92 16.44 5.24 0.09 -2.84 16 13 C 0.01 0.02 6.97 -82.30 -0.57 -0.56 16 14 C -0.10 -0.22 10.53 -39.15 -0.41 -0.63 16 15 C -0.12 -0.25 6.16 -106.93 -0.66 -0.91 16 16 C -0.05 -0.05 10.06 -39.53 -0.40 -0.44 16 17 C -0.14 -0.09 8.59 -39.97 -0.34 -0.44 16 18 C -0.04 -0.04 5.39 -104.57 -0.56 -0.61 16 19 C -0.08 0.03 2.78 36.01 0.10 0.13 16 20 O -0.54 -0.46 12.80 -35.23 -0.45 -0.91 16 21 Si 0.69 -0.77 29.81 -169.99 -5.07 -5.84 16 22 C -0.10 -0.11 9.69 -39.42 -0.38 -0.50 16 23 C 0.12 0.17 7.25 -83.98 -0.61 -0.44 16 24 N -0.58 0.23 6.07 -7.36 -0.04 0.19 16 25 C -0.14 0.17 7.25 -25.91 -0.19 -0.02 16 26 C -0.12 -0.02 8.61 -39.58 -0.34 -0.36 16 27 C -0.11 -0.05 10.05 -39.58 -0.40 -0.45 16 28 C -0.12 -0.09 9.70 -39.58 -0.38 -0.47 16 29 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 30 H 0.07 -0.10 8.09 -51.93 -0.42 -0.52 16 31 H 0.07 -0.10 8.09 -51.93 -0.42 -0.52 16 32 H 0.12 -0.12 8.06 -52.48 -0.42 -0.55 16 33 H 0.10 -0.21 7.72 -51.93 -0.40 -0.61 16 34 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 35 H 0.40 -1.45 7.76 -40.82 -0.32 -1.76 16 36 H 0.16 0.23 8.06 -52.49 -0.42 -0.19 16 37 H 0.13 -0.16 8.06 -52.48 -0.42 -0.59 16 38 H 0.13 -0.14 4.81 -52.49 -0.25 -0.39 16 39 H 0.08 -0.17 7.96 -51.93 -0.41 -0.58 16 40 H 0.38 -1.18 8.74 45.56 0.40 -0.78 16 41 H -0.26 -0.23 7.11 56.52 0.40 0.17 16 42 H -0.25 -0.51 7.05 56.52 0.40 -0.12 16 43 H 0.12 -0.03 8.06 -52.49 -0.42 -0.45 16 44 H 0.42 -1.47 8.12 -40.82 -0.33 -1.80 16 45 H 0.08 -0.02 8.14 -51.93 -0.42 -0.45 16 46 H 0.10 -0.13 6.31 -51.93 -0.33 -0.46 16 47 H 0.12 -0.16 6.66 -52.48 -0.35 -0.51 16 48 H 0.12 -0.14 8.06 -52.49 -0.42 -0.56 16 49 H 0.12 -0.08 8.06 -52.49 -0.42 -0.50 16 LS Contribution 403.96 15.07 6.09 6.09 Total: 0.00 -8.84 403.96 -13.58 -22.42 By element: Atomic # 1 Polarization: -6.65 SS G_CDS: -6.65 Total: -13.29 kcal Atomic # 6 Polarization: 0.99 SS G_CDS: -7.26 Total: -6.27 kcal Atomic # 7 Polarization: 0.97 SS G_CDS: -0.33 Total: 0.64 kcal Atomic # 8 Polarization: -3.38 SS G_CDS: -0.36 Total: -3.75 kcal Atomic # 14 Polarization: -0.77 SS G_CDS: -5.07 Total: -5.84 kcal Total LS contribution 6.09 Total: 6.09 kcal Total: -8.84 -13.58 -22.42 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9650858_13158378.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 66.613 kcal (2) G-P(sol) polarization free energy of solvation -8.839 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 57.774 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.580 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.419 kcal (6) G-S(sol) free energy of system = (1) + (5) 44.194 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds