Wall clock time and date at job start Tue Mar 9 2021 12:50:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.38206 * 120.00509 * 2 1 4 4 C 1.38260 * 120.00308 * 180.29572 * 3 2 1 5 5 C 1.50700 * 120.00402 * 179.74657 * 4 3 2 6 6 H 1.09002 * 112.84338 * 348.52712 * 5 4 3 7 7 C 1.53779 * 113.61530 * 119.72910 * 5 4 3 8 8 C 1.53782 * 87.08091 * 139.98201 * 7 5 4 9 9 H 1.08995 * 113.60923 * 219.93513 * 8 7 5 10 10 N 1.46496 * 113.61418 * 89.11226 * 8 7 5 11 11 C 1.34786 * 119.99774 * 154.99809 * 10 8 7 12 12 O 1.21641 * 119.99546 * 0.02562 * 11 10 8 13 13 C 1.47048 * 119.99942 * 180.02562 * 11 10 8 14 14 C 1.35869 * 125.42596 * 179.97438 * 13 11 10 15 15 C 1.41595 * 107.72816 * 180.02562 * 14 13 11 16 16 C 1.40060 * 133.38229 * 179.97438 * 15 14 13 17 17 C 1.36482 * 119.82907 * 179.75990 * 16 15 14 18 18 C 1.38898 * 120.61290 * 0.51843 * 17 16 15 19 19 C 1.50699 * 119.67263 * 179.73576 * 18 17 16 20 20 O 1.42903 * 109.47152 * 244.72876 * 19 18 17 21 21 Si 1.86305 * 109.47184 * 4.72348 * 19 18 17 22 22 C 1.37704 * 120.65097 * 359.45612 * 18 17 16 23 23 C 1.39194 * 119.80814 * 0.28058 * 22 18 17 24 24 N 1.37479 * 133.18706 * 179.97438 * 23 22 18 25 25 C 1.53785 * 87.08175 * 334.56416 * 8 7 5 26 26 C 1.38218 * 119.99400 * 359.47207 * 4 3 2 27 27 C 1.38258 * 120.00376 * 0.25491 * 26 4 3 28 28 C 1.38215 * 119.99565 * 0.02562 * 27 26 4 29 29 H 1.09000 * 109.47251 * 270.23721 * 1 2 3 30 30 H 1.09000 * 109.46711 * 30.23104 * 1 2 3 31 31 H 1.08998 * 109.47382 * 150.23133 * 1 2 3 32 32 H 1.08003 * 120.00305 * 0.04685 * 3 2 1 33 33 H 1.09001 * 113.61402 * 25.42978 * 7 5 4 34 34 H 1.09000 * 113.60935 * 254.53185 * 7 5 4 35 35 H 0.96995 * 120.00134 * 335.00291 * 10 8 7 36 36 H 1.07998 * 126.13301 * 0.02562 * 14 13 11 37 37 H 1.08007 * 120.08753 * 0.02562 * 16 15 14 38 38 H 1.07997 * 119.69319 * 180.24724 * 17 16 15 39 39 H 1.08997 * 109.47198 * 124.72554 * 19 18 17 40 40 H 0.96700 * 114.00311 * 180.02562 * 20 19 18 41 41 H 1.48499 * 109.99670 * 178.68093 * 21 19 18 42 42 H 1.48497 * 110.00233 * 300.00062 * 21 19 18 43 43 H 1.08001 * 120.10029 * 180.25069 * 22 18 17 44 44 H 0.97001 * 125.60263 * 0.02562 * 24 23 22 45 45 H 1.08994 * 113.61229 * 139.98135 * 25 8 7 46 46 H 1.08995 * 113.61310 * 270.89010 * 25 8 7 47 47 H 1.08005 * 119.99429 * 180.27786 * 26 4 3 48 48 H 1.07995 * 119.99936 * 180.02562 * 27 26 4 49 49 H 1.07999 * 119.99502 * 179.97438 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1982 1.1968 0.0000 4 6 3.5807 1.1968 -0.0062 5 6 4.3344 2.5018 -0.0120 6 1 3.6926 3.3602 -0.2105 7 6 5.2530 2.6881 1.2072 8 6 6.2814 3.2982 0.2402 9 1 7.3083 2.9983 0.4490 10 7 6.1357 4.7453 0.0650 11 6 7.1957 5.4889 -0.3093 12 8 8.2731 4.9583 -0.5020 13 6 7.0496 6.9416 -0.4847 14 6 8.0404 7.7936 -0.8569 15 6 7.4909 9.0975 -0.9090 16 6 8.0232 10.3539 -1.2247 17 6 7.2225 11.4586 -1.1902 18 6 5.8843 11.3514 -0.8339 19 6 5.0209 12.5860 -0.7970 20 8 4.5953 12.8297 0.5453 21 14 5.9995 14.0468 -1.4129 22 6 5.3374 10.1274 -0.5196 23 6 6.1324 8.9852 -0.5528 24 7 5.8830 7.6576 -0.2975 25 6 5.6102 2.4726 -0.8701 26 6 4.2717 -0.0003 -0.0013 27 6 3.5804 -1.1976 0.0044 28 6 2.1982 -1.1974 0.0047 29 1 -0.3634 0.0043 1.0276 30 1 -0.3633 0.8879 -0.5174 31 1 -0.3634 -0.8920 -0.5102 32 1 1.6583 2.1322 0.0008 33 1 5.5786 1.7497 1.6559 34 1 4.8678 3.3975 1.9396 35 1 5.2764 5.1683 0.2184 36 1 9.0635 7.5244 -1.0741 37 1 9.0637 10.4477 -1.4990 38 1 7.6344 12.4258 -1.4379 39 1 4.1486 12.4385 -1.4336 40 1 4.0340 13.6109 0.6443 41 1 5.1495 15.2645 -1.4114 42 1 7.1916 14.2586 -0.5531 43 1 4.2948 10.0537 -0.2477 44 1 5.0285 7.2848 -0.0297 45 1 5.5135 3.0080 -1.8145 46 1 6.0335 1.4753 -0.9891 47 1 5.3517 -0.0003 -0.0016 48 1 4.1203 -2.1329 0.0086 49 1 1.6582 -2.1327 0.0087 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9650858_13158378.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:50:55 Heat of formation + Delta-G solvation = 48.104615 kcal Electronic energy + Delta-G solvation = -30383.597219 eV Core-core repulsion = 26243.170388 eV Total energy + Delta-G solvation = -4140.426831 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 363.162 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -42.74044 -41.54162 -40.36412 -39.11518 -38.69986 -37.09054 -34.94772 -33.43567 -33.27326 -31.99850 -31.06221 -30.44529 -27.85075 -27.27332 -26.72474 -26.00388 -24.37987 -23.25461 -23.06698 -22.10548 -21.88844 -21.29339 -19.96131 -19.57453 -18.54330 -18.08520 -17.66752 -17.25081 -16.98132 -16.52938 -16.48660 -16.31133 -16.03929 -15.72317 -15.29000 -15.12405 -15.06403 -14.85856 -14.76163 -14.69136 -14.41519 -14.28148 -14.02014 -13.88948 -13.79625 -13.52838 -13.49041 -13.05265 -12.84683 -12.74184 -12.68816 -12.32559 -12.17930 -12.14304 -11.76388 -11.70035 -11.67415 -11.43213 -11.21608 -10.97281 -10.45895 -10.30341 -9.69013 -9.45888 -9.34472 -8.83914 -4.87434 -0.39101 0.40841 0.47435 0.51251 0.91747 1.32914 1.63714 1.70635 1.90772 1.99941 2.13516 2.71874 2.77607 3.39677 3.41583 3.52201 3.63442 3.64126 3.68407 3.86623 3.89905 3.99023 4.03253 4.05489 4.15575 4.20659 4.25186 4.29576 4.42429 4.44863 4.47819 4.52875 4.59220 4.62381 4.73466 4.73742 4.78236 4.78668 4.87557 4.88949 4.96654 4.97414 5.00046 5.06552 5.17200 5.28379 5.29430 5.38581 5.44306 5.53614 5.56879 5.57701 5.69549 5.72445 5.96271 6.12591 6.21896 6.40716 6.61284 6.90924 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.116 4.116 2 C -0.098 4.098 3 C -0.129 4.129 4 C -0.073 4.073 5 C -0.066 4.066 6 H 0.109 0.891 7 C -0.124 4.124 8 C 0.116 3.884 9 H 0.093 0.907 10 N -0.695 5.695 11 C 0.590 3.410 12 O -0.557 6.557 13 C 0.010 3.990 14 C -0.116 4.116 15 C -0.136 4.136 16 C -0.058 4.058 17 C -0.150 4.150 18 C -0.052 4.052 19 C -0.083 4.083 20 O -0.558 6.558 21 Si 0.764 3.236 22 C -0.110 4.110 23 C 0.108 3.892 24 N -0.563 5.563 25 C -0.141 4.141 26 C -0.133 4.133 27 C -0.125 4.125 28 C -0.141 4.141 29 H 0.075 0.925 30 H 0.072 0.928 31 H 0.070 0.930 32 H 0.132 0.868 33 H 0.102 0.898 34 H 0.087 0.913 35 H 0.411 0.589 36 H 0.157 0.843 37 H 0.149 0.851 38 H 0.142 0.858 39 H 0.099 0.901 40 H 0.395 0.605 41 H -0.287 1.287 42 H -0.300 1.300 43 H 0.138 0.862 44 H 0.431 0.569 45 H 0.068 0.932 46 H 0.099 0.901 47 H 0.132 0.868 48 H 0.133 0.867 49 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.804 0.924 -1.524 6.072 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C -0.098 4.098 3 C -0.147 4.147 4 C -0.073 4.073 5 C -0.084 4.084 6 H 0.127 0.873 7 C -0.162 4.162 8 C 0.010 3.990 9 H 0.111 0.889 10 N -0.346 5.346 11 C 0.377 3.623 12 O -0.435 6.435 13 C -0.099 4.099 14 C -0.143 4.143 15 C -0.140 4.140 16 C -0.077 4.077 17 C -0.169 4.169 18 C -0.053 4.053 19 C -0.191 4.191 20 O -0.368 6.368 21 Si 0.670 3.330 22 C -0.130 4.130 23 C -0.003 4.003 24 N -0.169 5.169 25 C -0.179 4.179 26 C -0.151 4.151 27 C -0.143 4.143 28 C -0.159 4.159 29 H 0.093 0.907 30 H 0.091 0.909 31 H 0.089 0.911 32 H 0.150 0.850 33 H 0.120 0.880 34 H 0.106 0.894 35 H 0.248 0.752 36 H 0.174 0.826 37 H 0.166 0.834 38 H 0.160 0.840 39 H 0.117 0.883 40 H 0.246 0.754 41 H -0.215 1.215 42 H -0.227 1.227 43 H 0.156 0.844 44 H 0.272 0.728 45 H 0.087 0.913 46 H 0.117 0.883 47 H 0.150 0.850 48 H 0.151 0.849 49 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -4.518 0.632 -1.319 4.748 hybrid contribution -1.476 0.076 1.145 1.870 sum -5.994 0.708 -0.173 6.038 Atomic orbital electron populations 1.20836 0.90156 1.03386 1.02850 1.20227 0.97111 0.93342 0.99077 1.21163 0.93846 0.98091 1.01628 1.19825 0.93504 0.94874 0.99133 1.21591 0.94710 0.95063 0.97038 0.87291 1.23375 0.94607 1.02116 0.96081 1.21920 1.00591 0.78813 0.97628 0.88916 1.45419 1.12361 1.07882 1.68903 1.17255 0.84156 0.84472 0.76433 1.90859 1.27879 1.72601 1.52187 1.19937 0.87769 0.91255 1.10981 1.21105 0.99611 0.90678 1.02881 1.18434 0.93566 0.94420 1.07588 1.20609 1.00776 0.89651 0.96635 1.20680 0.93051 0.99321 1.03822 1.19201 0.93902 0.93265 0.98979 1.24976 1.03432 1.03363 0.87363 1.86553 1.72016 1.51528 1.26710 0.94011 0.76646 0.73795 0.88587 1.20006 1.00028 0.89032 1.03954 1.18417 0.95181 0.84848 1.01804 1.41751 1.10947 1.04885 1.59362 1.23551 0.95596 1.01130 0.97668 1.21207 1.00583 0.92054 1.01276 1.21395 0.94540 0.98808 0.99514 1.21305 0.94734 0.98187 1.01633 0.90664 0.90900 0.91126 0.84997 0.87992 0.89445 0.75203 0.82576 0.83374 0.84038 0.88273 0.75445 1.21453 1.22745 0.84417 0.72789 0.91338 0.88300 0.84987 0.84920 0.85333 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.27 10.01 71.24 0.71 0.98 16 2 C -0.10 -0.13 5.88 -19.87 -0.12 -0.25 16 3 C -0.13 -0.04 9.37 22.27 0.21 0.17 16 4 C -0.07 0.03 5.29 -19.86 -0.11 -0.07 16 5 C -0.07 0.29 3.86 -11.01 -0.04 0.25 16 6 H 0.11 -0.78 8.09 -2.39 -0.02 -0.80 16 7 C -0.12 0.63 7.29 31.12 0.23 0.85 16 8 C 0.12 -0.20 4.32 45.52 0.20 0.00 16 9 H 0.09 0.22 7.46 -2.39 -0.02 0.20 16 10 N -0.69 1.57 5.26 -443.66 -2.33 -0.77 16 11 C 0.59 2.88 7.80 86.55 0.67 3.55 16 12 O -0.56 -7.28 16.44 -4.16 -0.07 -7.35 16 13 C 0.01 0.04 6.97 39.91 0.28 0.31 16 14 C -0.12 -0.65 10.53 22.55 0.24 -0.42 16 15 C -0.14 -0.66 6.16 -21.36 -0.13 -0.79 16 16 C -0.06 -0.13 10.06 22.30 0.22 0.09 16 17 C -0.15 -0.20 8.59 22.02 0.19 -0.01 16 18 C -0.05 -0.09 5.39 -19.83 -0.11 -0.19 16 19 C -0.08 0.15 2.78 71.24 0.20 0.35 16 20 O -0.56 -0.51 12.80 -148.98 -1.91 -2.42 16 21 Si 0.76 -1.97 29.81 68.60 2.05 0.07 16 22 C -0.11 -0.17 9.69 22.37 0.22 0.04 16 23 C 0.11 0.31 7.25 39.14 0.28 0.59 16 24 N -0.56 0.64 6.07 -177.19 -1.08 -0.44 16 25 C -0.14 0.33 7.25 31.12 0.23 0.56 16 26 C -0.13 -0.05 8.61 22.27 0.19 0.14 16 27 C -0.12 -0.15 10.05 22.27 0.22 0.07 16 28 C -0.14 -0.24 9.70 22.27 0.22 -0.03 16 29 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 30 H 0.07 -0.27 8.09 -2.39 -0.02 -0.29 16 31 H 0.07 -0.21 8.09 -2.39 -0.02 -0.23 16 32 H 0.13 -0.41 8.06 -2.91 -0.02 -0.44 16 33 H 0.10 -0.48 7.72 -2.39 -0.02 -0.49 16 34 H 0.09 -0.59 8.14 -2.39 -0.02 -0.61 16 35 H 0.41 -3.47 7.76 -92.71 -0.72 -4.19 16 36 H 0.16 0.79 8.06 -2.91 -0.02 0.77 16 37 H 0.15 -0.30 8.06 -2.91 -0.02 -0.32 16 38 H 0.14 -0.31 4.81 -2.91 -0.01 -0.33 16 39 H 0.10 -0.62 7.96 -2.39 -0.02 -0.64 16 40 H 0.40 -2.79 8.74 -74.06 -0.65 -3.43 16 41 H -0.29 -0.42 7.11 99.48 0.71 0.29 16 42 H -0.30 -1.49 7.05 99.48 0.70 -0.79 16 43 H 0.14 -0.23 8.06 -2.91 -0.02 -0.26 16 44 H 0.43 -3.52 8.12 -92.71 -0.75 -4.28 16 45 H 0.07 -0.04 8.14 -2.39 -0.02 -0.06 16 46 H 0.10 -0.23 6.31 -2.39 -0.02 -0.25 16 47 H 0.13 -0.32 6.66 -2.91 -0.02 -0.34 16 48 H 0.13 -0.25 8.06 -2.91 -0.02 -0.27 16 49 H 0.13 -0.12 8.06 -2.91 -0.02 -0.14 16 Total: 0.00 -21.45 403.96 -0.41 -21.86 By element: Atomic # 1 Polarization: -16.09 SS G_CDS: -1.07 Total: -17.16 kcal Atomic # 6 Polarization: 2.20 SS G_CDS: 4.00 Total: 6.20 kcal Atomic # 7 Polarization: 2.21 SS G_CDS: -3.41 Total: -1.20 kcal Atomic # 8 Polarization: -7.79 SS G_CDS: -1.98 Total: -9.76 kcal Atomic # 14 Polarization: -1.97 SS G_CDS: 2.05 Total: 0.07 kcal Total: -21.45 -0.41 -21.86 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9650858_13158378.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 69.963 kcal (2) G-P(sol) polarization free energy of solvation -21.450 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 48.514 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.409 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.859 kcal (6) G-S(sol) free energy of system = (1) + (5) 48.105 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds