Wall clock time and date at job start Tue Mar 9 2021 12:51:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.38211 * 120.00193 * 2 1 4 4 C 1.38255 * 120.00108 * 179.97438 * 3 2 1 5 5 C 1.50700 * 120.00466 * 180.02562 * 4 3 2 6 6 H 1.09001 * 112.90073 * 348.74759 * 5 4 3 7 7 C 1.53773 * 113.61949 * 119.99964 * 5 4 3 8 8 C 1.53779 * 87.08455 * 139.98370 * 7 5 4 9 9 H 1.09000 * 113.61289 * 219.93781 * 8 7 5 10 10 N 1.46502 * 113.61486 * 89.11612 * 8 7 5 11 11 C 1.34774 * 119.99884 * 155.00101 * 10 8 7 12 12 O 1.21513 * 120.00239 * 359.97438 * 11 10 8 13 13 C 1.48172 * 119.99625 * 179.97438 * 11 10 8 14 14 N 1.32718 * 119.72668 * 359.97438 * 13 11 10 15 15 C 1.31515 * 121.64155 * 180.02562 * 14 13 11 16 16 C 1.38556 * 120.90641 * 0.02562 * 15 14 13 17 17 C 1.50700 * 120.32394 * 179.97438 * 16 15 14 18 18 O 1.42901 * 109.47199 * 245.01819 * 17 16 15 19 19 Si 1.86299 * 109.47290 * 5.01660 * 17 16 15 20 20 C 1.38623 * 119.35381 * 359.97438 * 16 15 14 21 21 C 1.38595 * 118.48634 * 0.02562 * 20 16 15 22 22 C 1.53781 * 113.61726 * 217.50244 * 5 4 3 23 23 C 1.38218 * 119.99914 * 0.27400 * 4 3 2 24 24 C 1.38259 * 120.00146 * 359.52144 * 23 4 3 25 25 C 1.38211 * 119.99365 * 0.45472 * 24 23 4 26 26 H 1.09002 * 109.47239 * 89.99495 * 1 2 3 27 27 H 1.08999 * 109.47399 * 209.99757 * 1 2 3 28 28 H 1.08996 * 109.46876 * 330.00315 * 1 2 3 29 29 H 1.07998 * 120.00236 * 0.02562 * 3 2 1 30 30 H 1.09006 * 113.61370 * 25.42708 * 7 5 4 31 31 H 1.09006 * 113.68647 * 254.54614 * 7 5 4 32 32 H 0.97003 * 119.99950 * 335.00086 * 10 8 7 33 33 H 1.08001 * 119.54643 * 180.02562 * 15 14 13 34 34 H 1.09004 * 109.47386 * 125.02101 * 17 16 15 35 35 H 0.96696 * 114.00321 * 180.02562 * 18 17 16 36 36 H 1.48499 * 109.99976 * 178.67833 * 19 17 16 37 37 H 1.48499 * 110.00057 * 300.00431 * 19 17 16 38 38 H 1.07998 * 120.76123 * 179.97438 * 20 16 15 39 39 H 1.08000 * 120.46738 * 179.72634 * 21 20 16 40 40 H 1.08991 * 113.62140 * 105.46552 * 22 5 4 41 41 H 1.09004 * 113.60966 * 334.55851 * 22 5 4 42 42 H 1.08004 * 120.00139 * 179.72273 * 23 4 3 43 43 H 1.07998 * 120.00538 * 180.24936 * 24 23 4 44 44 H 1.08008 * 119.99829 * 179.79284 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1981 1.1969 0.0000 4 6 3.5806 1.1969 0.0005 5 6 4.3342 2.5019 0.0011 6 1 3.6936 3.3618 -0.1949 7 6 5.2519 2.6829 1.2217 8 6 6.2810 3.2973 0.2583 9 1 7.3078 2.9965 0.4664 10 7 6.1355 4.7452 0.0894 11 6 7.1956 5.4905 -0.2808 12 8 8.2724 4.9615 -0.4741 13 6 7.0482 6.9548 -0.4522 14 7 5.8695 7.5268 -0.2402 15 6 5.6962 8.8228 -0.3817 16 6 6.7458 9.6441 -0.7607 17 6 6.5323 11.1274 -0.9195 18 8 6.7188 11.4916 -2.2886 19 14 4.8005 11.5656 -0.3907 20 6 7.9943 9.0879 -0.9923 21 6 8.1478 7.7195 -0.8355 22 6 5.6106 2.4766 -0.8562 23 6 4.2717 -0.0001 -0.0047 24 6 3.5804 -1.1975 -0.0004 25 6 2.1983 -1.1974 -0.0004 26 1 -0.3634 0.0001 -1.0277 27 1 -0.3634 -0.8900 0.5138 28 1 -0.3633 0.8900 0.5138 29 1 1.6581 2.1322 0.0004 30 1 5.5772 1.7425 1.6666 31 1 4.8672 3.3887 1.9579 32 1 5.2760 5.1676 0.2440 33 1 4.7222 9.2528 -0.2000 34 1 7.2488 11.6661 -0.2994 35 1 6.5970 12.4345 -2.4649 36 1 4.5876 13.0303 -0.5124 37 1 3.8140 10.8376 -1.2286 38 1 8.8282 9.7068 -1.2890 39 1 9.1052 7.2521 -1.0120 40 1 5.5147 3.0162 -1.7983 41 1 6.0341 1.4798 -0.9794 42 1 5.3517 -0.0002 -0.0088 43 1 4.1203 -2.1328 -0.0004 44 1 1.6582 -2.1327 -0.0005 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9650858_13287726.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:51:10 Heat of formation + Delta-G solvation = 21.785708 kcal Electronic energy + Delta-G solvation = -25865.833848 eV Core-core repulsion = 22136.255644 eV Total energy + Delta-G solvation = -3729.578204 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 325.146 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -41.93101 -41.25337 -40.06067 -38.80371 -38.02311 -34.85087 -33.88083 -33.21606 -32.97641 -31.75994 -28.12028 -27.73631 -26.70227 -26.08203 -25.00887 -23.84699 -23.02850 -22.19896 -21.69748 -19.82640 -19.27549 -18.76932 -18.13118 -17.66456 -16.95900 -16.88487 -16.37851 -16.24138 -16.15062 -15.89996 -15.56069 -15.32665 -14.94421 -14.74134 -14.60598 -14.52189 -14.23037 -14.04880 -14.00511 -13.96064 -13.72843 -13.47019 -13.08256 -12.75329 -12.67271 -12.59670 -12.17144 -12.13194 -11.70049 -11.64663 -11.31710 -11.15250 -11.06361 -10.79814 -10.57468 -10.29626 -10.00753 -9.62942 -9.40113 -5.13312 -0.54698 0.08873 0.47182 0.53823 1.05866 1.43289 1.64082 1.79460 1.99242 2.66410 2.83580 2.93418 3.15015 3.45576 3.53331 3.63660 3.67565 3.72621 3.75280 3.88260 3.92520 4.00492 4.06977 4.17236 4.18332 4.21747 4.26661 4.48140 4.54901 4.55728 4.64245 4.72348 4.73147 4.74773 4.80254 4.90142 4.91539 4.98023 5.00324 5.01543 5.14604 5.20658 5.29050 5.37128 5.55691 5.62896 5.74203 5.78541 6.16260 6.22578 6.35562 6.65475 7.16652 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.084 4.084 3 C -0.117 4.117 4 C -0.067 4.067 5 C -0.074 4.074 6 H 0.098 0.902 7 C -0.134 4.134 8 C 0.117 3.883 9 H 0.107 0.893 10 N -0.693 5.693 11 C 0.576 3.424 12 O -0.527 6.527 13 C 0.080 3.920 14 N -0.452 5.452 15 C 0.105 3.895 16 C -0.102 4.102 17 C -0.076 4.076 18 O -0.535 6.535 19 Si 0.683 3.317 20 C -0.052 4.052 21 C -0.107 4.107 22 C -0.144 4.144 23 C -0.123 4.123 24 C -0.113 4.113 25 C -0.126 4.126 26 H 0.070 0.930 27 H 0.066 0.934 28 H 0.066 0.934 29 H 0.120 0.880 30 H 0.099 0.901 31 H 0.078 0.922 32 H 0.412 0.588 33 H 0.165 0.835 34 H 0.084 0.916 35 H 0.384 0.616 36 H -0.255 1.255 37 H -0.250 1.250 38 H 0.146 0.854 39 H 0.153 0.847 40 H 0.074 0.926 41 H 0.097 0.903 42 H 0.122 0.878 43 H 0.122 0.878 44 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.199 2.996 2.874 4.698 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.084 4.084 3 C -0.135 4.135 4 C -0.067 4.067 5 C -0.092 4.092 6 H 0.116 0.884 7 C -0.172 4.172 8 C 0.011 3.989 9 H 0.125 0.875 10 N -0.344 5.344 11 C 0.361 3.639 12 O -0.402 6.402 13 C -0.058 4.058 14 N -0.163 5.163 15 C -0.054 4.054 16 C -0.104 4.104 17 C -0.186 4.186 18 O -0.342 6.342 19 Si 0.583 3.417 20 C -0.078 4.078 21 C -0.128 4.128 22 C -0.182 4.182 23 C -0.141 4.141 24 C -0.131 4.131 25 C -0.144 4.144 26 H 0.089 0.911 27 H 0.085 0.915 28 H 0.085 0.915 29 H 0.138 0.862 30 H 0.118 0.882 31 H 0.097 0.903 32 H 0.249 0.751 33 H 0.181 0.819 34 H 0.102 0.898 35 H 0.233 0.767 36 H -0.180 1.180 37 H -0.174 1.174 38 H 0.164 0.836 39 H 0.171 0.829 40 H 0.093 0.907 41 H 0.115 0.885 42 H 0.140 0.860 43 H 0.140 0.860 44 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges -2.769 1.742 2.701 4.242 hybrid contribution 0.692 1.494 -1.172 2.021 sum -2.077 3.235 1.529 4.138 Atomic orbital electron populations 1.20815 0.91153 1.02898 1.02460 1.19946 0.96138 0.93169 0.99160 1.20940 0.93535 0.97591 1.01452 1.19656 0.93393 0.94345 0.99281 1.21595 0.95068 0.95294 0.97241 0.88411 1.23414 0.95579 1.01904 0.96297 1.21925 1.00820 0.79378 0.96732 0.87464 1.45493 1.13267 1.07153 1.68507 1.17832 0.84113 0.85048 0.76879 1.90816 1.26564 1.72476 1.50371 1.21139 0.90235 0.94375 1.00077 1.67530 1.23494 1.12516 1.12807 1.22595 0.98359 0.88496 0.95948 1.20523 0.94914 0.95327 0.99680 1.24733 1.13043 0.93956 0.86863 1.86583 1.92748 1.30708 1.24195 0.95056 0.74858 0.81204 0.90538 1.21538 0.97349 0.94474 0.94467 1.22208 1.00405 0.93832 0.96357 1.23570 0.95349 1.01160 0.98124 1.20995 0.99903 0.91920 1.01287 1.21146 0.94318 0.98052 0.99609 1.21068 0.94360 0.97574 1.01355 0.91089 0.91458 0.91477 0.86189 0.88233 0.90323 0.75097 0.81876 0.89814 0.76712 1.18010 1.17401 0.83576 0.82905 0.90696 0.88499 0.85982 0.86007 0.86169 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.05 10.01 36.00 0.36 0.41 16 2 C -0.08 -0.11 5.88 -104.63 -0.62 -0.73 16 3 C -0.12 -0.14 9.37 -39.59 -0.37 -0.51 16 4 C -0.07 -0.06 5.29 -104.62 -0.55 -0.61 16 5 C -0.07 0.04 3.86 -90.96 -0.35 -0.31 16 6 H 0.10 -0.10 8.10 -51.93 -0.42 -0.52 16 7 C -0.13 0.15 7.29 -25.92 -0.19 -0.04 16 8 C 0.12 0.03 4.32 -67.12 -0.29 -0.26 16 9 H 0.11 0.16 7.46 -51.93 -0.39 -0.23 16 10 N -0.69 -0.64 5.25 -53.86 -0.28 -0.93 16 11 C 0.58 1.88 7.81 -12.18 -0.10 1.79 16 12 O -0.53 -3.21 15.92 5.35 0.09 -3.12 16 13 C 0.08 0.19 6.75 -83.01 -0.56 -0.37 16 14 N -0.45 -0.69 9.54 -9.80 -0.09 -0.79 16 15 C 0.11 0.02 9.84 -17.57 -0.17 -0.15 16 16 C -0.10 0.01 5.40 -104.36 -0.56 -0.56 16 17 C -0.08 0.14 2.81 36.01 0.10 0.24 16 18 O -0.53 0.23 12.82 -35.23 -0.45 -0.22 16 19 Si 0.68 -1.77 29.87 -169.99 -5.08 -6.84 16 20 C -0.05 -0.01 9.83 -39.31 -0.39 -0.40 16 21 C -0.11 -0.15 9.63 -39.05 -0.38 -0.53 16 22 C -0.14 0.00 7.25 -25.92 -0.19 -0.19 16 23 C -0.12 -0.10 8.62 -39.58 -0.34 -0.45 16 24 C -0.11 -0.12 10.05 -39.58 -0.40 -0.52 16 25 C -0.13 -0.16 9.70 -39.58 -0.38 -0.54 16 26 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 27 H 0.07 -0.07 8.09 -51.93 -0.42 -0.49 16 28 H 0.07 -0.07 8.08 -51.93 -0.42 -0.49 16 29 H 0.12 -0.02 8.06 -52.49 -0.42 -0.44 16 30 H 0.10 -0.13 7.73 -51.93 -0.40 -0.53 16 31 H 0.08 -0.11 8.14 -51.93 -0.42 -0.54 16 32 H 0.41 -0.16 8.03 -40.82 -0.33 -0.49 16 33 H 0.16 -0.34 4.88 -52.49 -0.26 -0.59 16 34 H 0.08 -0.31 7.96 -51.93 -0.41 -0.72 16 35 H 0.38 -1.68 8.74 45.56 0.40 -1.28 16 36 H -0.26 0.12 7.11 56.52 0.40 0.53 16 37 H -0.25 -0.10 7.05 56.52 0.40 0.30 16 38 H 0.15 -0.23 8.06 -52.49 -0.42 -0.65 16 39 H 0.15 0.13 7.64 -52.49 -0.40 -0.27 16 40 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 41 H 0.10 -0.04 6.30 -51.93 -0.33 -0.37 16 42 H 0.12 -0.07 6.64 -52.48 -0.35 -0.42 16 43 H 0.12 -0.07 8.06 -52.49 -0.42 -0.50 16 44 H 0.12 -0.02 8.06 -52.48 -0.42 -0.44 16 LS Contribution 367.60 15.07 5.54 5.54 Total: 0.00 -7.52 367.60 -11.54 -19.06 By element: Atomic # 1 Polarization: -3.10 SS G_CDS: -5.89 Total: -8.98 kcal Atomic # 6 Polarization: 1.65 SS G_CDS: -5.37 Total: -3.72 kcal Atomic # 7 Polarization: -1.34 SS G_CDS: -0.38 Total: -1.71 kcal Atomic # 8 Polarization: -2.98 SS G_CDS: -0.37 Total: -3.34 kcal Atomic # 14 Polarization: -1.77 SS G_CDS: -5.08 Total: -6.84 kcal Total LS contribution 5.54 Total: 5.54 kcal Total: -7.52 -11.54 -19.06 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9650858_13287726.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 40.845 kcal (2) G-P(sol) polarization free energy of solvation -7.520 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 33.325 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.539 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.060 kcal (6) G-S(sol) free energy of system = (1) + (5) 21.786 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds