Wall clock time and date at job start Tue Mar 9 2021 12:51:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.38219 * 119.99857 * 2 1 4 4 C 1.38253 * 119.99573 * 180.29030 * 3 2 1 5 5 C 1.50704 * 119.99914 * 179.74124 * 4 3 2 6 6 H 1.08996 * 112.84732 * 348.53298 * 5 4 3 7 7 C 1.53780 * 113.61215 * 119.73342 * 5 4 3 8 8 C 1.53778 * 87.08427 * 139.98260 * 7 5 4 9 9 H 1.08995 * 113.61814 * 219.93499 * 8 7 5 10 10 N 1.46497 * 113.61664 * 89.11213 * 8 7 5 11 11 C 1.34779 * 120.00122 * 156.53214 * 10 8 7 12 12 O 1.21582 * 120.00010 * 359.97438 * 11 10 8 13 13 C 1.47602 * 119.99793 * 179.97438 * 11 10 8 14 14 C 1.39713 * 120.08460 * 180.02562 * 13 11 10 15 15 C 1.37722 * 119.90991 * 179.97438 * 14 13 11 16 16 C 1.50707 * 119.95505 * 180.02562 * 15 14 13 17 17 O 1.42901 * 109.47083 * 105.00210 * 16 15 14 18 18 Si 1.86298 * 109.47014 * 344.99973 * 16 15 14 19 19 C 1.38969 * 120.09093 * 359.97438 * 15 14 13 20 20 O 1.35712 * 119.91630 * 179.97438 * 19 15 14 21 21 C 1.39019 * 120.17358 * 359.79009 * 19 15 14 22 22 C 1.50707 * 119.95639 * 180.25776 * 21 19 15 23 23 C 1.37679 * 120.09052 * 0.46546 * 21 19 15 24 24 C 1.53786 * 87.17076 * 334.52361 * 8 7 5 25 25 C 1.38219 * 119.99994 * 359.47761 * 4 3 2 26 26 C 1.38257 * 120.00107 * 0.24572 * 25 4 3 27 27 C 1.38218 * 119.99737 * 0.02562 * 26 25 4 28 28 H 1.08995 * 109.47715 * 270.23622 * 1 2 3 29 29 H 1.09011 * 109.46815 * 30.23666 * 1 2 3 30 30 H 1.09002 * 109.47004 * 150.23493 * 1 2 3 31 31 H 1.07995 * 120.00198 * 0.03799 * 3 2 1 32 32 H 1.08995 * 113.61577 * 25.42893 * 7 5 4 33 33 H 1.09004 * 113.60927 * 254.52789 * 7 5 4 34 34 H 0.96999 * 119.99940 * 336.52748 * 10 8 7 35 35 H 1.08003 * 120.04731 * 359.96141 * 14 13 11 36 36 H 1.09007 * 109.46535 * 224.99989 * 16 15 14 37 37 H 0.96702 * 113.99322 * 299.99796 * 17 16 15 38 38 H 1.48490 * 110.00111 * 58.68115 * 18 16 15 39 39 H 1.48501 * 109.99716 * 180.02562 * 18 16 15 40 40 H 0.96704 * 114.00203 * 89.99517 * 20 19 15 41 41 H 1.09000 * 109.46984 * 270.20685 * 22 21 19 42 42 H 1.09000 * 109.47171 * 30.20328 * 22 21 19 43 43 H 1.08993 * 109.47264 * 150.20824 * 22 21 19 44 44 H 1.08002 * 120.04953 * 179.79649 * 23 21 19 45 45 H 1.08996 * 113.61543 * 140.02220 * 24 8 7 46 46 H 1.09004 * 113.61385 * 270.92620 * 24 8 7 47 47 H 1.08000 * 119.99564 * 180.27248 * 25 4 3 48 48 H 1.07995 * 119.99660 * 180.02562 * 26 25 4 49 49 H 1.07999 * 119.99736 * 179.97438 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1981 1.1970 0.0000 4 6 3.5806 1.1970 -0.0061 5 6 4.3342 2.5021 -0.0120 6 1 3.6924 3.3604 -0.2105 7 6 5.2527 2.6885 1.2072 8 6 6.2812 3.2986 0.2403 9 1 7.3081 2.9988 0.4491 10 7 6.1355 4.7457 0.0650 11 6 7.1875 5.4849 -0.3391 12 8 8.2576 4.9508 -0.5577 13 6 7.0404 6.9429 -0.5163 14 6 8.1296 7.7108 -0.9357 15 6 7.9882 9.0708 -1.1003 16 6 9.1623 9.9001 -1.5532 17 8 8.9886 10.2628 -2.9244 18 14 10.7300 8.9111 -1.3662 19 6 6.7641 9.6794 -0.8504 20 8 6.6289 11.0199 -1.0133 21 6 5.6766 8.9180 -0.4377 22 6 4.3498 9.5822 -0.1737 23 6 5.8112 7.5587 -0.2657 24 6 5.6123 2.4729 -0.8714 25 6 4.2717 -0.0001 -0.0012 26 6 3.5804 -1.1974 0.0046 27 6 2.1982 -1.1973 0.0050 28 1 -0.3634 0.0042 1.0276 29 1 -0.3633 0.8880 -0.5176 30 1 -0.3633 -0.8921 -0.5102 31 1 1.6581 2.1323 0.0006 32 1 5.5784 1.7502 1.6560 33 1 4.8675 3.3980 1.9396 34 1 5.2818 5.1719 0.2397 35 1 9.0813 7.2386 -1.1303 36 1 9.2266 10.8018 -0.9441 37 1 8.9234 9.5082 -3.5256 38 1 10.6420 7.6635 -2.1666 39 1 11.8954 9.7181 -1.8090 40 1 6.3552 11.2824 -1.9029 41 1 4.3004 9.8931 0.8698 42 1 4.2459 10.4552 -0.8181 43 1 3.5436 8.8789 -0.3818 44 1 4.9667 6.9683 0.0581 45 1 5.5173 3.0085 -1.8160 46 1 6.0362 1.4757 -0.9898 47 1 5.3517 0.0000 -0.0015 48 1 4.1204 -2.1326 0.0088 49 1 1.6582 -2.1326 0.0091 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9650858_13287732.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:51:15 Heat of formation + Delta-G solvation = -34.332595 kcal Electronic energy + Delta-G solvation = -30377.223505 eV Core-core repulsion = 26236.417928 eV Total energy + Delta-G solvation = -4140.805577 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.166 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -41.91407 -41.22639 -40.25410 -38.91375 -37.97989 -37.49134 -34.92304 -33.99400 -33.36800 -32.18827 -31.32736 -28.00123 -27.79412 -27.00822 -26.68143 -26.30442 -24.68654 -23.05020 -22.29586 -21.87452 -21.61296 -19.89855 -19.55782 -18.87441 -18.16497 -17.65892 -17.35314 -16.85291 -16.58177 -16.37485 -16.18431 -16.08781 -15.87501 -15.81840 -15.41800 -14.98923 -14.77974 -14.70596 -14.38404 -14.29771 -14.11749 -13.99398 -13.88870 -13.74318 -13.45142 -13.29589 -13.02842 -12.92489 -12.87588 -12.76188 -12.65600 -12.46122 -12.13985 -11.92352 -11.70996 -11.65456 -11.63676 -11.16769 -11.14118 -10.65032 -10.22632 -9.98412 -9.66896 -9.66129 -9.43316 -5.01550 -0.41066 0.06189 0.43065 0.49538 1.20015 1.50600 1.58008 1.83276 1.96637 2.53691 2.79900 3.12809 3.32434 3.44478 3.47672 3.54070 3.68133 3.68353 3.73348 3.93528 4.01314 4.01565 4.07856 4.16288 4.20729 4.27287 4.37669 4.47872 4.50286 4.56096 4.61330 4.65866 4.71371 4.77157 4.77937 4.80948 4.82910 4.84463 4.92658 5.00459 5.03389 5.04188 5.07404 5.14514 5.19907 5.20720 5.31353 5.32261 5.50376 5.59498 5.59621 5.71862 5.75589 6.14773 6.38928 6.41345 6.70263 7.08845 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.116 4.116 2 C -0.097 4.097 3 C -0.128 4.128 4 C -0.073 4.073 5 C -0.065 4.065 6 H 0.112 0.888 7 C -0.123 4.123 8 C 0.115 3.885 9 H 0.087 0.913 10 N -0.692 5.692 11 C 0.562 3.438 12 O -0.577 6.577 13 C -0.150 4.150 14 C -0.065 4.065 15 C -0.152 4.152 16 C -0.061 4.061 17 O -0.539 6.539 18 Si 0.743 3.257 19 C 0.158 3.842 20 O -0.496 6.496 21 C -0.119 4.119 22 C -0.110 4.110 23 C -0.053 4.053 24 C -0.143 4.143 25 C -0.134 4.134 26 C -0.126 4.126 27 C -0.141 4.141 28 H 0.075 0.925 29 H 0.073 0.927 30 H 0.069 0.931 31 H 0.134 0.866 32 H 0.099 0.901 33 H 0.091 0.909 34 H 0.415 0.585 35 H 0.132 0.868 36 H 0.127 0.873 37 H 0.385 0.615 38 H -0.289 1.289 39 H -0.291 1.291 40 H 0.411 0.589 41 H 0.078 0.922 42 H 0.073 0.927 43 H 0.087 0.913 44 H 0.163 0.837 45 H 0.066 0.934 46 H 0.095 0.905 47 H 0.131 0.869 48 H 0.132 0.868 49 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.191 0.126 2.316 7.556 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C -0.097 4.097 3 C -0.146 4.146 4 C -0.073 4.073 5 C -0.083 4.083 6 H 0.130 0.870 7 C -0.160 4.160 8 C 0.010 3.990 9 H 0.105 0.895 10 N -0.344 5.344 11 C 0.350 3.650 12 O -0.457 6.457 13 C -0.153 4.153 14 C -0.084 4.084 15 C -0.153 4.153 16 C -0.171 4.171 17 O -0.347 6.347 18 Si 0.649 3.351 19 C 0.112 3.888 20 O -0.309 6.309 21 C -0.120 4.120 22 C -0.166 4.166 23 C -0.072 4.072 24 C -0.182 4.182 25 C -0.152 4.152 26 C -0.144 4.144 27 C -0.159 4.159 28 H 0.094 0.906 29 H 0.092 0.908 30 H 0.088 0.912 31 H 0.152 0.848 32 H 0.118 0.882 33 H 0.109 0.891 34 H 0.254 0.746 35 H 0.149 0.851 36 H 0.145 0.855 37 H 0.235 0.765 38 H -0.216 1.216 39 H -0.218 1.218 40 H 0.272 0.728 41 H 0.096 0.904 42 H 0.092 0.908 43 H 0.106 0.894 44 H 0.181 0.819 45 H 0.085 0.915 46 H 0.113 0.887 47 H 0.148 0.852 48 H 0.150 0.850 49 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges -5.587 0.019 2.598 6.162 hybrid contribution -0.586 -0.231 -1.677 1.791 sum -6.173 -0.212 0.921 6.245 Atomic orbital electron populations 1.20838 0.90126 1.03377 1.02878 1.20232 0.97121 0.93333 0.99056 1.21178 0.93796 0.98138 1.01502 1.19847 0.93554 0.94894 0.99028 1.21638 0.94605 0.95039 0.96989 0.87012 1.23351 0.94534 1.02073 0.96088 1.21874 1.00276 0.79402 0.97457 0.89450 1.45443 1.13662 1.07467 1.67852 1.18382 0.83642 0.86905 0.76030 1.90793 1.28570 1.74020 1.52362 1.19766 0.95771 0.92385 1.07369 1.21116 0.98844 0.92598 0.95846 1.20489 0.96977 0.93522 1.04293 1.24832 1.02473 1.05220 0.84601 1.86578 1.94607 1.37144 1.16390 0.93930 0.74530 0.75193 0.91407 1.18453 0.91208 0.83465 0.95666 1.84662 1.90804 1.17537 1.37936 1.20448 0.96749 0.93528 1.01259 1.20753 0.91691 1.01133 1.03033 1.21360 0.96221 0.94056 0.95528 1.23600 0.95881 1.00975 0.97728 1.21197 1.00509 0.92123 1.01351 1.21387 0.94579 0.98773 0.99638 1.21297 0.94690 0.98218 1.01705 0.90617 0.90823 0.91215 0.84781 0.88235 0.89067 0.74609 0.85073 0.85543 0.76544 1.21590 1.21825 0.72839 0.90365 0.90844 0.89438 0.81945 0.91537 0.88686 0.85166 0.85039 0.85386 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.30 10.01 71.24 0.71 1.02 16 2 C -0.10 -0.11 5.88 -19.87 -0.12 -0.22 16 3 C -0.13 0.00 9.37 22.27 0.21 0.21 16 4 C -0.07 0.04 5.29 -19.86 -0.11 -0.07 16 5 C -0.06 0.29 3.87 -10.92 -0.04 0.25 16 6 H 0.11 -0.85 8.09 -2.39 -0.02 -0.87 16 7 C -0.12 0.65 7.29 31.12 0.23 0.87 16 8 C 0.12 -0.18 4.30 45.52 0.20 0.02 16 9 H 0.09 0.26 7.50 -2.39 -0.02 0.24 16 10 N -0.69 1.68 5.21 -443.14 -2.31 -0.63 16 11 C 0.56 2.54 7.76 86.71 0.67 3.21 16 12 O -0.58 -7.72 15.96 -3.97 -0.06 -7.78 16 13 C -0.15 -0.22 5.87 -20.08 -0.12 -0.34 16 14 C -0.07 -0.22 8.20 22.50 0.18 -0.04 16 15 C -0.15 -0.20 5.27 -19.81 -0.10 -0.31 16 16 C -0.06 -0.08 2.37 71.24 0.17 0.09 16 17 O -0.54 -1.10 12.88 -148.98 -1.92 -3.02 16 18 Si 0.74 1.79 30.24 68.60 2.07 3.87 16 19 C 0.16 -0.03 6.66 22.63 0.15 0.12 16 20 O -0.50 0.56 11.85 -90.33 -1.07 -0.51 16 21 C -0.12 0.38 5.89 -19.81 -0.12 0.26 16 22 C -0.11 0.78 9.78 71.24 0.70 1.48 16 23 C -0.05 0.22 9.18 22.50 0.21 0.43 16 24 C -0.14 0.27 7.27 31.22 0.23 0.50 16 25 C -0.13 -0.07 8.61 22.27 0.19 0.12 16 26 C -0.13 -0.17 10.05 22.27 0.22 0.05 16 27 C -0.14 -0.24 9.70 22.27 0.22 -0.03 16 28 H 0.08 -0.27 8.14 -2.39 -0.02 -0.29 16 29 H 0.07 -0.30 8.09 -2.38 -0.02 -0.32 16 30 H 0.07 -0.22 8.09 -2.39 -0.02 -0.24 16 31 H 0.13 -0.50 8.06 -2.91 -0.02 -0.53 16 32 H 0.10 -0.47 7.72 -2.39 -0.02 -0.48 16 33 H 0.09 -0.69 8.14 -2.38 -0.02 -0.71 16 34 H 0.42 -3.73 6.73 -92.71 -0.62 -4.36 16 35 H 0.13 0.76 4.43 -2.91 -0.01 0.75 16 36 H 0.13 0.10 7.82 -2.38 -0.02 0.08 16 37 H 0.39 -1.17 8.70 -74.06 -0.64 -1.81 16 38 H -0.29 -2.28 6.68 99.48 0.66 -1.61 16 39 H -0.29 -2.50 7.11 99.48 0.71 -1.79 16 40 H 0.41 -3.15 9.06 -74.05 -0.67 -3.82 16 41 H 0.08 -0.53 8.14 -2.39 -0.02 -0.55 16 42 H 0.07 -0.52 7.53 -2.39 -0.02 -0.53 16 43 H 0.09 -0.92 8.08 -2.39 -0.02 -0.94 16 44 H 0.16 -1.84 6.40 -2.91 -0.02 -1.86 16 45 H 0.07 0.00 8.14 -2.39 -0.02 -0.02 16 46 H 0.09 -0.15 6.32 -2.38 -0.02 -0.17 16 47 H 0.13 -0.26 6.66 -2.91 -0.02 -0.28 16 48 H 0.13 -0.21 8.06 -2.91 -0.02 -0.24 16 49 H 0.13 -0.12 8.06 -2.91 -0.02 -0.14 16 Total: 0.00 -20.39 400.50 -0.54 -20.93 By element: Atomic # 1 Polarization: -19.55 SS G_CDS: -0.93 Total: -20.48 kcal Atomic # 6 Polarization: 3.94 SS G_CDS: 3.68 Total: 7.62 kcal Atomic # 7 Polarization: 1.68 SS G_CDS: -2.31 Total: -0.63 kcal Atomic # 8 Polarization: -8.26 SS G_CDS: -3.05 Total: -11.31 kcal Atomic # 14 Polarization: 1.79 SS G_CDS: 2.07 Total: 3.87 kcal Total: -20.39 -0.54 -20.93 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9650858_13287732.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -13.407 kcal (2) G-P(sol) polarization free energy of solvation -20.386 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -33.793 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.539 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.925 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.333 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds