Wall clock time and date at job start Tue Mar 9 2021 12:51:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.36422 * 125.79802 * 2 1 4 4 C 1.47375 * 127.19279 * 0.02562 * 3 2 1 5 5 O 1.21614 * 120.00399 * 0.14788 * 4 3 2 6 6 N 1.34781 * 119.99846 * 180.15399 * 4 3 2 7 7 C 1.46498 * 119.99839 * 179.97438 * 6 4 3 8 8 H 1.09002 * 112.85138 * 25.32914 * 7 6 4 9 9 C 1.53780 * 113.61250 * 156.52728 * 7 6 4 10 10 C 1.53775 * 87.08050 * 89.11707 * 9 7 6 11 11 H 1.09010 * 113.61406 * 270.87930 * 10 9 7 12 12 C 1.50699 * 113.61703 * 139.98452 * 10 9 7 13 13 C 1.38221 * 119.99738 * 299.72285 * 12 10 9 14 14 C 1.38260 * 119.99989 * 179.78872 * 13 12 10 15 15 C 1.38207 * 119.99622 * 0.43773 * 14 13 12 16 16 C 1.38252 * 120.00324 * 359.81740 * 15 14 13 17 17 C 1.50702 * 119.99901 * 179.97438 * 16 15 14 18 18 C 1.38209 * 120.00411 * 359.97438 * 16 15 14 19 19 C 1.53781 * 113.61220 * 254.13209 * 7 6 4 20 20 C 1.47020 * 105.61327 * 180.12518 * 3 2 1 21 21 C 1.34179 * 105.95633 * 359.63346 * 20 3 2 22 22 C 1.50697 * 125.44118 * 180.19264 * 21 20 3 23 23 O 1.42903 * 109.47114 * 299.99928 * 22 21 20 24 24 Si 1.86302 * 109.47159 * 179.97438 * 22 21 20 25 25 O 1.33647 * 125.80337 * 179.71288 * 2 1 3 26 26 H 1.09004 * 109.46677 * 180.31292 * 1 2 3 27 27 H 1.08999 * 109.47232 * 300.30480 * 1 2 3 28 28 H 1.08997 * 109.47474 * 60.31492 * 1 2 3 29 29 H 0.96996 * 120.00115 * 359.97438 * 6 4 3 30 30 H 1.09008 * 113.61136 * 203.66409 * 9 7 6 31 31 H 1.08999 * 113.61443 * 334.56396 * 9 7 6 32 32 H 1.07999 * 119.99881 * 359.97438 * 13 12 10 33 33 H 1.07996 * 119.99803 * 180.27602 * 14 13 12 34 34 H 1.08000 * 119.99564 * 179.83092 * 15 14 13 35 35 H 1.09003 * 109.47590 * 269.97492 * 17 16 15 36 36 H 1.08994 * 109.47297 * 29.97673 * 17 16 15 37 37 H 1.09002 * 109.47302 * 149.97812 * 17 16 15 38 38 H 1.07997 * 120.00303 * 180.02562 * 18 16 15 39 39 H 1.09002 * 113.61430 * 25.43902 * 19 7 6 40 40 H 1.09004 * 113.61073 * 156.33651 * 19 7 6 41 41 H 1.08002 * 127.02488 * 179.90021 * 20 3 2 42 42 H 1.09001 * 109.47213 * 59.99685 * 22 21 20 43 43 H 0.96695 * 113.99694 * 300.00404 * 23 22 21 44 44 H 1.48494 * 109.99868 * 58.68171 * 24 22 21 45 45 H 1.48507 * 109.99806 * 179.97438 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3050 1.1065 0.0000 4 6 1.8739 2.5158 0.0005 5 8 0.6889 2.7892 0.0037 6 7 2.7929 3.5016 -0.0027 7 6 2.3644 4.9025 -0.0027 8 1 1.3735 5.0421 0.4295 9 6 3.4216 5.8701 0.5550 10 6 3.9636 5.9804 -0.8799 11 1 4.7198 5.2327 -1.1197 12 6 4.3784 7.3776 -1.2628 13 6 3.4507 8.4022 -1.2484 14 6 3.8322 9.6850 -1.5956 15 6 5.1389 9.9410 -1.9657 16 6 6.0655 8.9152 -1.9852 17 6 7.4903 9.1943 -2.3894 18 6 5.6853 7.6336 -1.6341 19 6 2.5491 5.6031 -1.3592 20 6 3.6849 0.5992 -0.0031 21 6 3.5860 -0.7389 0.0036 22 6 4.7460 -1.7009 0.0077 23 8 5.5419 -1.4922 -1.1607 24 14 4.1028 -3.4493 0.0176 25 8 2.2889 -1.0839 0.0054 26 1 -0.3633 -1.0277 0.0056 27 1 -0.3633 0.5185 0.8872 28 1 -0.3634 0.5089 -0.8928 29 1 3.7381 3.2836 -0.0050 30 1 3.0030 6.8015 0.9364 31 1 4.1184 5.4020 1.2502 32 1 2.4287 8.2013 -0.9631 33 1 3.1084 10.4864 -1.5800 34 1 5.4362 10.9425 -2.2395 35 1 7.5947 9.0637 -3.4665 36 1 7.7502 10.2181 -2.1207 37 1 8.1565 8.5029 -1.8734 38 1 6.4093 6.8324 -1.6489 39 1 2.5419 4.9196 -2.2082 40 1 1.8924 6.4617 -1.5001 41 1 4.5928 1.1841 -0.0055 42 1 5.3543 -1.5328 0.8964 43 1 5.0641 -1.6248 -1.9908 44 1 3.2456 -3.6818 -1.1725 45 1 5.2371 -4.4078 0.0210 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9650858_13308374.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:51:26 Heat of formation + Delta-G solvation = -6.897206 kcal Electronic energy + Delta-G solvation = -26927.482276 eV Core-core repulsion = 23071.630147 eV Total energy + Delta-G solvation = -3855.852129 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 328.151 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -43.74848 -41.50634 -40.17987 -38.78727 -38.21808 -34.79360 -34.04505 -33.34495 -33.03878 -31.79600 -29.45023 -27.84400 -26.74010 -26.62440 -25.61052 -24.21504 -23.06065 -22.55977 -21.74307 -20.72068 -19.77364 -19.04197 -18.09359 -17.70812 -17.63255 -17.01245 -16.75222 -16.39833 -16.10859 -15.99727 -15.86145 -15.58287 -15.02695 -14.82522 -14.74904 -14.46370 -14.19999 -14.07820 -14.01862 -13.95183 -13.86487 -13.74044 -13.50550 -13.10978 -12.99090 -12.88745 -12.76787 -12.68183 -12.19183 -12.11437 -11.73052 -11.68173 -11.19215 -11.09750 -10.89255 -10.73733 -10.06451 -9.66262 -9.56497 -9.43083 -5.02700 0.30198 0.44019 0.50591 0.81778 1.09650 1.40871 1.66679 1.88075 2.13662 2.35248 2.80303 3.05866 3.32395 3.41335 3.63705 3.65513 3.76120 3.76876 3.89231 3.97376 4.03546 4.10851 4.12742 4.23445 4.24949 4.39758 4.45102 4.52144 4.58393 4.60069 4.62927 4.68985 4.70474 4.72833 4.74775 4.83761 4.88264 4.96752 4.97948 5.08739 5.11983 5.17376 5.20303 5.25960 5.55540 5.59836 5.71214 5.75106 5.88883 6.13062 6.17219 6.50653 7.24984 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 C 0.096 3.904 3 C -0.254 4.254 4 C 0.595 3.405 5 O -0.537 6.537 6 N -0.707 5.707 7 C 0.121 3.879 8 H 0.106 0.894 9 C -0.135 4.135 10 C -0.073 4.073 11 H 0.096 0.904 12 C -0.067 4.067 13 C -0.123 4.123 14 C -0.113 4.113 15 C -0.125 4.125 16 C -0.084 4.084 17 C -0.117 4.117 18 C -0.118 4.118 19 C -0.144 4.144 20 C -0.148 4.148 21 C -0.055 4.055 22 C -0.034 4.034 23 O -0.521 6.521 24 Si 0.702 3.298 25 O -0.167 6.167 26 H 0.080 0.920 27 H 0.100 0.900 28 H 0.098 0.902 29 H 0.401 0.599 30 H 0.099 0.901 31 H 0.076 0.924 32 H 0.122 0.878 33 H 0.122 0.878 34 H 0.121 0.879 35 H 0.071 0.929 36 H 0.067 0.933 37 H 0.066 0.934 38 H 0.119 0.881 39 H 0.074 0.926 40 H 0.096 0.904 41 H 0.158 0.842 42 H 0.137 0.863 43 H 0.381 0.619 44 H -0.256 1.256 45 H -0.248 1.248 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.345 -0.468 1.413 2.007 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C 0.042 3.958 3 C -0.258 4.258 4 C 0.384 3.616 5 O -0.415 6.415 6 N -0.358 5.358 7 C 0.016 3.984 8 H 0.124 0.876 9 C -0.173 4.173 10 C -0.092 4.092 11 H 0.114 0.886 12 C -0.067 4.067 13 C -0.141 4.141 14 C -0.131 4.131 15 C -0.143 4.143 16 C -0.084 4.084 17 C -0.173 4.173 18 C -0.136 4.136 19 C -0.182 4.182 20 C -0.168 4.168 21 C -0.103 4.103 22 C -0.144 4.144 23 O -0.327 6.327 24 Si 0.601 3.399 25 O -0.064 6.064 26 H 0.099 0.901 27 H 0.118 0.882 28 H 0.116 0.884 29 H 0.236 0.764 30 H 0.118 0.882 31 H 0.095 0.905 32 H 0.140 0.860 33 H 0.140 0.860 34 H 0.139 0.861 35 H 0.089 0.911 36 H 0.086 0.914 37 H 0.085 0.915 38 H 0.137 0.863 39 H 0.092 0.908 40 H 0.114 0.886 41 H 0.175 0.825 42 H 0.155 0.845 43 H 0.229 0.771 44 H -0.180 1.180 45 H -0.173 1.173 Dipole moment (debyes) X Y Z Total from point charges 0.844 -1.216 1.439 2.064 hybrid contribution 0.893 0.754 -1.152 1.642 sum 1.737 -0.462 0.286 1.820 Atomic orbital electron populations 1.20568 0.83249 1.04086 1.05494 1.22917 0.94092 0.82855 0.95892 1.21111 0.93240 0.93744 1.17737 1.17153 0.85394 0.83632 0.75451 1.90801 1.16485 1.84039 1.50148 1.45440 1.09647 1.05123 1.75591 1.21845 0.99593 0.79817 0.97151 0.87598 1.23413 0.97957 0.99884 0.96004 1.21630 0.97239 0.93750 0.96544 0.88620 1.19654 0.93511 0.94719 0.98851 1.20994 0.99382 0.92627 1.01082 1.21150 0.96193 0.96804 0.98948 1.21068 0.93384 0.98920 1.00951 1.19945 0.96200 0.93460 0.98783 1.20818 0.92278 1.02490 1.01753 1.20932 0.95726 0.96317 1.00592 1.23615 0.95960 1.00826 0.97814 1.22571 0.96444 0.93502 1.04234 1.22553 0.82928 0.95551 1.09260 1.24341 0.90297 1.07708 0.92029 1.86661 1.38696 1.91733 1.15653 0.94371 0.81842 0.73663 0.90014 1.83684 1.16361 1.34982 1.71384 0.90106 0.88176 0.88365 0.76429 0.88245 0.90499 0.85981 0.85977 0.86136 0.91068 0.91432 0.91493 0.86252 0.90759 0.88573 0.82483 0.84513 0.77075 1.18020 1.17271 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 0.02 9.14 36.01 0.33 0.35 16 2 C 0.10 0.14 7.37 -34.96 -0.26 -0.12 16 3 C -0.25 -0.45 6.31 -103.28 -0.65 -1.11 16 4 C 0.60 1.62 7.81 -12.54 -0.10 1.52 16 5 O -0.54 -2.95 15.28 5.27 0.08 -2.87 16 6 N -0.71 -0.11 5.26 -54.11 -0.28 -0.39 16 7 C 0.12 -0.01 4.30 -67.12 -0.29 -0.30 16 8 H 0.11 0.14 7.50 -51.93 -0.39 -0.25 16 9 C -0.13 0.18 7.29 -25.92 -0.19 -0.01 16 10 C -0.07 0.06 3.87 -90.82 -0.35 -0.29 16 11 H 0.10 -0.14 8.10 -51.92 -0.42 -0.56 16 12 C -0.07 -0.05 5.29 -104.62 -0.55 -0.60 16 13 C -0.12 -0.09 8.63 -39.58 -0.34 -0.43 16 14 C -0.11 -0.10 10.05 -39.58 -0.40 -0.50 16 15 C -0.13 -0.14 9.70 -39.59 -0.38 -0.53 16 16 C -0.08 -0.10 5.88 -104.63 -0.62 -0.72 16 17 C -0.12 0.07 10.01 36.01 0.36 0.43 16 18 C -0.12 -0.12 9.37 -39.59 -0.37 -0.49 16 19 C -0.14 0.04 7.27 -25.78 -0.19 -0.15 16 20 C -0.15 -0.03 10.46 -37.45 -0.39 -0.43 16 21 C -0.05 -0.01 6.20 -35.74 -0.22 -0.23 16 22 C -0.03 0.04 2.97 36.00 0.11 0.15 16 23 O -0.52 0.12 12.87 -35.23 -0.45 -0.34 16 24 Si 0.70 -0.95 32.09 -169.99 -5.45 -6.40 16 25 O -0.17 -0.17 8.89 7.65 0.07 -0.10 16 26 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 27 H 0.10 -0.02 8.07 -51.93 -0.42 -0.44 16 28 H 0.10 0.00 8.10 -51.93 -0.42 -0.42 16 29 H 0.40 -0.75 7.87 -40.82 -0.32 -1.07 16 30 H 0.10 -0.14 7.73 -51.92 -0.40 -0.54 16 31 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 32 H 0.12 -0.09 6.64 -52.49 -0.35 -0.44 16 33 H 0.12 -0.09 8.06 -52.49 -0.42 -0.51 16 34 H 0.12 -0.04 8.06 -52.49 -0.42 -0.46 16 35 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 36 H 0.07 -0.07 8.08 -51.93 -0.42 -0.49 16 37 H 0.07 -0.08 8.09 -51.93 -0.42 -0.50 16 38 H 0.12 -0.04 8.06 -52.49 -0.42 -0.46 16 39 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 40 H 0.10 -0.06 6.30 -51.93 -0.33 -0.38 16 41 H 0.16 -0.27 7.74 -52.49 -0.41 -0.67 16 42 H 0.14 -0.38 7.96 -51.93 -0.41 -0.79 16 43 H 0.38 -1.05 8.70 45.56 0.40 -0.66 16 44 H -0.26 -0.36 7.11 56.52 0.40 0.05 16 45 H -0.25 -0.30 7.11 56.52 0.40 0.11 16 LS Contribution 378.14 15.07 5.70 5.70 Total: 0.00 -7.02 378.14 -11.32 -18.34 By element: Atomic # 1 Polarization: -4.04 SS G_CDS: -6.47 Total: -10.51 kcal Atomic # 6 Polarization: 1.07 SS G_CDS: -4.50 Total: -3.43 kcal Atomic # 7 Polarization: -0.11 SS G_CDS: -0.28 Total: -0.39 kcal Atomic # 8 Polarization: -3.00 SS G_CDS: -0.30 Total: -3.31 kcal Atomic # 14 Polarization: -0.95 SS G_CDS: -5.45 Total: -6.40 kcal Total LS contribution 5.70 Total: 5.70 kcal Total: -7.02 -11.32 -18.34 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9650858_13308374.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.441 kcal (2) G-P(sol) polarization free energy of solvation -7.022 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 4.419 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.316 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.338 kcal (6) G-S(sol) free energy of system = (1) + (5) -6.897 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds