Wall clock time and date at job start Tue Mar 9 2021 12:51:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.36422 * 125.79802 * 2 1 4 4 C 1.47375 * 127.19279 * 0.02562 * 3 2 1 5 5 O 1.21614 * 120.00399 * 0.14788 * 4 3 2 6 6 N 1.34781 * 119.99846 * 180.15399 * 4 3 2 7 7 C 1.46498 * 119.99839 * 179.97438 * 6 4 3 8 8 H 1.09002 * 112.85138 * 25.32914 * 7 6 4 9 9 C 1.53780 * 113.61250 * 156.52728 * 7 6 4 10 10 C 1.53775 * 87.08050 * 89.11707 * 9 7 6 11 11 H 1.09010 * 113.61406 * 270.87930 * 10 9 7 12 12 C 1.50699 * 113.61703 * 139.98452 * 10 9 7 13 13 C 1.38221 * 119.99738 * 299.72285 * 12 10 9 14 14 C 1.38260 * 119.99989 * 179.78872 * 13 12 10 15 15 C 1.38207 * 119.99622 * 0.43773 * 14 13 12 16 16 C 1.38252 * 120.00324 * 359.81740 * 15 14 13 17 17 C 1.50702 * 119.99901 * 179.97438 * 16 15 14 18 18 C 1.38209 * 120.00411 * 359.97438 * 16 15 14 19 19 C 1.53781 * 113.61220 * 254.13209 * 7 6 4 20 20 C 1.47020 * 105.61327 * 180.12518 * 3 2 1 21 21 C 1.34179 * 105.95633 * 359.63346 * 20 3 2 22 22 C 1.50697 * 125.44118 * 180.19264 * 21 20 3 23 23 O 1.42903 * 109.47114 * 299.99928 * 22 21 20 24 24 Si 1.86302 * 109.47159 * 179.97438 * 22 21 20 25 25 O 1.33647 * 125.80337 * 179.71288 * 2 1 3 26 26 H 1.09004 * 109.46677 * 180.31292 * 1 2 3 27 27 H 1.08999 * 109.47232 * 300.30480 * 1 2 3 28 28 H 1.08997 * 109.47474 * 60.31492 * 1 2 3 29 29 H 0.96996 * 120.00115 * 359.97438 * 6 4 3 30 30 H 1.09008 * 113.61136 * 203.66409 * 9 7 6 31 31 H 1.08999 * 113.61443 * 334.56396 * 9 7 6 32 32 H 1.07999 * 119.99881 * 359.97438 * 13 12 10 33 33 H 1.07996 * 119.99803 * 180.27602 * 14 13 12 34 34 H 1.08000 * 119.99564 * 179.83092 * 15 14 13 35 35 H 1.09003 * 109.47590 * 269.97492 * 17 16 15 36 36 H 1.08994 * 109.47297 * 29.97673 * 17 16 15 37 37 H 1.09002 * 109.47302 * 149.97812 * 17 16 15 38 38 H 1.07997 * 120.00303 * 180.02562 * 18 16 15 39 39 H 1.09002 * 113.61430 * 25.43902 * 19 7 6 40 40 H 1.09004 * 113.61073 * 156.33651 * 19 7 6 41 41 H 1.08002 * 127.02488 * 179.90021 * 20 3 2 42 42 H 1.09001 * 109.47213 * 59.99685 * 22 21 20 43 43 H 0.96695 * 113.99694 * 300.00404 * 23 22 21 44 44 H 1.48494 * 109.99868 * 58.68171 * 24 22 21 45 45 H 1.48507 * 109.99806 * 179.97438 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3050 1.1065 0.0000 4 6 1.8739 2.5158 0.0005 5 8 0.6889 2.7892 0.0037 6 7 2.7929 3.5016 -0.0027 7 6 2.3644 4.9025 -0.0027 8 1 1.3735 5.0421 0.4295 9 6 3.4216 5.8701 0.5550 10 6 3.9636 5.9804 -0.8799 11 1 4.7198 5.2327 -1.1197 12 6 4.3784 7.3776 -1.2628 13 6 3.4507 8.4022 -1.2484 14 6 3.8322 9.6850 -1.5956 15 6 5.1389 9.9410 -1.9657 16 6 6.0655 8.9152 -1.9852 17 6 7.4903 9.1943 -2.3894 18 6 5.6853 7.6336 -1.6341 19 6 2.5491 5.6031 -1.3592 20 6 3.6849 0.5992 -0.0031 21 6 3.5860 -0.7389 0.0036 22 6 4.7460 -1.7009 0.0077 23 8 5.5419 -1.4922 -1.1607 24 14 4.1028 -3.4493 0.0176 25 8 2.2889 -1.0839 0.0054 26 1 -0.3633 -1.0277 0.0056 27 1 -0.3633 0.5185 0.8872 28 1 -0.3634 0.5089 -0.8928 29 1 3.7381 3.2836 -0.0050 30 1 3.0030 6.8015 0.9364 31 1 4.1184 5.4020 1.2502 32 1 2.4287 8.2013 -0.9631 33 1 3.1084 10.4864 -1.5800 34 1 5.4362 10.9425 -2.2395 35 1 7.5947 9.0637 -3.4665 36 1 7.7502 10.2181 -2.1207 37 1 8.1565 8.5029 -1.8734 38 1 6.4093 6.8324 -1.6489 39 1 2.5419 4.9196 -2.2082 40 1 1.8924 6.4617 -1.5001 41 1 4.5928 1.1841 -0.0055 42 1 5.3543 -1.5328 0.8964 43 1 5.0641 -1.6248 -1.9908 44 1 3.2456 -3.6818 -1.1725 45 1 5.2371 -4.4078 0.0210 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9650858_13308374.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:51:25 Heat of formation + Delta-G solvation = -1.346476 kcal Electronic energy + Delta-G solvation = -26927.241579 eV Core-core repulsion = 23071.630147 eV Total energy + Delta-G solvation = -3855.611432 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 328.151 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -43.78059 -41.53279 -40.27110 -38.84862 -38.15974 -34.89962 -34.07861 -33.33556 -33.04071 -31.81373 -29.42111 -27.81301 -26.70083 -26.64332 -25.59501 -24.25673 -23.06487 -22.57159 -21.78923 -20.78749 -19.76520 -19.03528 -18.11770 -17.73106 -17.63383 -17.03933 -16.77786 -16.42446 -16.14234 -15.96669 -15.87000 -15.64684 -15.06838 -14.86459 -14.73640 -14.48115 -14.19241 -14.12206 -14.00207 -13.93963 -13.85533 -13.73113 -13.45816 -13.04330 -12.94595 -12.84726 -12.77686 -12.67921 -12.19138 -12.16376 -11.72302 -11.65900 -11.23129 -11.18116 -10.96905 -10.74376 -10.14400 -9.68625 -9.59146 -9.44848 -4.94047 0.21348 0.41481 0.47787 0.80960 1.17802 1.41539 1.69723 1.91321 2.08853 2.21443 2.78318 3.16090 3.37624 3.44362 3.65028 3.66600 3.74045 3.77734 3.92224 3.99879 4.06215 4.10113 4.17782 4.25590 4.38627 4.46325 4.48755 4.53933 4.59762 4.61553 4.65358 4.73592 4.75027 4.77665 4.78551 4.85422 4.91065 4.98242 5.01754 5.11479 5.14894 5.18212 5.20501 5.29637 5.52287 5.58044 5.70094 5.73898 5.87514 6.13059 6.33103 6.46057 7.13538 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 C 0.086 3.914 3 C -0.269 4.269 4 C 0.591 3.409 5 O -0.572 6.572 6 N -0.695 5.695 7 C 0.119 3.881 8 H 0.090 0.910 9 C -0.123 4.123 10 C -0.066 4.066 11 H 0.105 0.895 12 C -0.073 4.073 13 C -0.133 4.133 14 C -0.124 4.124 15 C -0.140 4.140 16 C -0.097 4.097 17 C -0.116 4.116 18 C -0.131 4.131 19 C -0.142 4.142 20 C -0.147 4.147 21 C -0.058 4.058 22 C -0.032 4.032 23 O -0.533 6.533 24 Si 0.770 3.230 25 O -0.171 6.171 26 H 0.099 0.901 27 H 0.097 0.903 28 H 0.092 0.908 29 H 0.412 0.588 30 H 0.102 0.898 31 H 0.086 0.914 32 H 0.132 0.868 33 H 0.134 0.866 34 H 0.130 0.870 35 H 0.074 0.926 36 H 0.071 0.929 37 H 0.072 0.928 38 H 0.131 0.869 39 H 0.063 0.937 40 H 0.098 0.902 41 H 0.177 0.823 42 H 0.158 0.842 43 H 0.390 0.610 44 H -0.295 1.295 45 H -0.283 1.283 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.362 -0.434 1.859 3.037 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.132 4.132 2 C 0.032 3.968 3 C -0.274 4.274 4 C 0.380 3.620 5 O -0.453 6.453 6 N -0.346 5.346 7 C 0.013 3.987 8 H 0.108 0.892 9 C -0.161 4.161 10 C -0.084 4.084 11 H 0.123 0.877 12 C -0.073 4.073 13 C -0.151 4.151 14 C -0.142 4.142 15 C -0.158 4.158 16 C -0.097 4.097 17 C -0.172 4.172 18 C -0.148 4.148 19 C -0.180 4.180 20 C -0.166 4.166 21 C -0.106 4.106 22 C -0.141 4.141 23 O -0.341 6.341 24 Si 0.674 3.326 25 O -0.068 6.068 26 H 0.117 0.883 27 H 0.115 0.885 28 H 0.110 0.890 29 H 0.249 0.751 30 H 0.120 0.880 31 H 0.105 0.895 32 H 0.150 0.850 33 H 0.152 0.848 34 H 0.148 0.852 35 H 0.092 0.908 36 H 0.090 0.910 37 H 0.091 0.909 38 H 0.148 0.852 39 H 0.082 0.918 40 H 0.116 0.884 41 H 0.194 0.806 42 H 0.175 0.825 43 H 0.240 0.760 44 H -0.222 1.222 45 H -0.209 1.209 Dipole moment (debyes) X Y Z Total from point charges 1.891 -1.165 1.893 2.918 hybrid contribution 0.578 0.728 -1.346 1.636 sum 2.469 -0.437 0.547 2.566 Atomic orbital electron populations 1.20581 0.82532 1.05127 1.04994 1.23220 0.94786 0.83000 0.95746 1.21196 0.94304 0.93362 1.18513 1.17365 0.85191 0.84377 0.75061 1.90777 1.17926 1.84589 1.52055 1.45358 1.09950 1.04847 1.74431 1.21844 0.99405 0.79906 0.97532 0.89193 1.23349 0.97351 0.99475 0.95905 1.21608 0.96906 0.93248 0.96627 0.87659 1.19837 0.93513 0.95323 0.98669 1.21201 1.00012 0.92717 1.01155 1.21399 0.96539 0.97385 0.98894 1.21302 0.93669 0.99556 1.01291 1.20224 0.97050 0.93652 0.98807 1.20837 0.91467 1.02946 1.01973 1.21165 0.96211 0.96716 1.00756 1.23594 0.96633 1.00622 0.97186 1.22782 0.96349 0.93650 1.03810 1.22842 0.82847 0.95931 1.08952 1.24489 0.90088 1.06996 0.92563 1.86640 1.39365 1.91717 1.16425 0.93526 0.78814 0.72200 0.88064 1.83686 1.16810 1.34933 1.71389 0.88269 0.88496 0.88987 0.75083 0.88010 0.89508 0.84995 0.84808 0.85224 0.90778 0.90990 0.90888 0.85151 0.91787 0.88400 0.80568 0.82477 0.75999 1.22209 1.20909 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.01 9.14 71.24 0.65 0.64 16 2 C 0.09 0.29 7.37 25.26 0.19 0.47 16 3 C -0.27 -1.02 6.31 -18.99 -0.12 -1.14 16 4 C 0.59 3.63 7.81 86.65 0.68 4.30 16 5 O -0.57 -7.16 15.28 -4.07 -0.06 -7.22 16 6 N -0.70 -0.22 5.26 -443.34 -2.33 -2.55 16 7 C 0.12 0.01 4.30 45.52 0.20 0.21 16 8 H 0.09 0.34 7.50 -2.39 -0.02 0.32 16 9 C -0.12 0.41 7.29 31.12 0.23 0.64 16 10 C -0.07 0.15 3.87 -10.93 -0.04 0.11 16 11 H 0.11 -0.44 8.10 -2.38 -0.02 -0.45 16 12 C -0.07 -0.08 5.29 -19.86 -0.11 -0.19 16 13 C -0.13 -0.19 8.63 22.27 0.19 0.00 16 14 C -0.12 -0.24 10.05 22.27 0.22 -0.02 16 15 C -0.14 -0.34 9.70 22.27 0.22 -0.13 16 16 C -0.10 -0.23 5.88 -19.87 -0.12 -0.34 16 17 C -0.12 0.17 10.01 71.24 0.71 0.88 16 18 C -0.13 -0.23 9.37 22.27 0.21 -0.03 16 19 C -0.14 0.05 7.27 31.21 0.23 0.27 16 20 C -0.15 0.05 10.46 23.65 0.25 0.30 16 21 C -0.06 0.02 6.20 24.76 0.15 0.18 16 22 C -0.03 0.11 2.97 71.24 0.21 0.33 16 23 O -0.53 0.75 12.87 -148.98 -1.92 -1.16 16 24 Si 0.77 -2.11 32.09 68.60 2.20 0.09 16 25 O -0.17 -0.33 8.89 4.45 0.04 -0.29 16 26 H 0.10 -0.41 8.14 -2.38 -0.02 -0.43 16 27 H 0.10 0.08 8.07 -2.39 -0.02 0.06 16 28 H 0.09 0.13 8.10 -2.39 -0.02 0.11 16 29 H 0.41 -1.87 7.87 -92.71 -0.73 -2.60 16 30 H 0.10 -0.34 7.73 -2.38 -0.02 -0.36 16 31 H 0.09 -0.42 8.14 -2.39 -0.02 -0.44 16 32 H 0.13 -0.19 6.64 -2.91 -0.02 -0.21 16 33 H 0.13 -0.19 8.06 -2.91 -0.02 -0.21 16 34 H 0.13 -0.06 8.06 -2.91 -0.02 -0.08 16 35 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 36 H 0.07 -0.18 8.08 -2.39 -0.02 -0.20 16 37 H 0.07 -0.20 8.09 -2.39 -0.02 -0.22 16 38 H 0.13 -0.17 8.06 -2.91 -0.02 -0.19 16 39 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 40 H 0.10 -0.07 6.30 -2.38 -0.02 -0.09 16 41 H 0.18 -0.89 7.74 -2.91 -0.02 -0.92 16 42 H 0.16 -1.19 7.96 -2.39 -0.02 -1.20 16 43 H 0.39 -2.35 8.70 -74.06 -0.64 -3.00 16 44 H -0.30 -1.11 7.11 99.48 0.71 -0.41 16 45 H -0.28 -0.83 7.11 99.48 0.71 -0.12 16 Total: 0.00 -16.92 378.14 1.56 -15.36 By element: Atomic # 1 Polarization: -10.39 SS G_CDS: -0.32 Total: -10.71 kcal Atomic # 6 Polarization: 2.53 SS G_CDS: 3.95 Total: 6.48 kcal Atomic # 7 Polarization: -0.22 SS G_CDS: -2.33 Total: -2.55 kcal Atomic # 8 Polarization: -6.73 SS G_CDS: -1.94 Total: -8.67 kcal Atomic # 14 Polarization: -2.11 SS G_CDS: 2.20 Total: 0.09 kcal Total: -16.92 1.56 -15.36 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9650858_13308374.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 14.015 kcal (2) G-P(sol) polarization free energy of solvation -16.920 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.905 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.559 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.361 kcal (6) G-S(sol) free energy of system = (1) + (5) -1.346 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds