Wall clock time and date at job start Tue Mar 9 2021 12:51:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50694 * 1 3 3 C 1.38218 * 120.00562 * 2 1 4 4 C 1.38262 * 120.00266 * 180.27207 * 3 2 1 5 5 C 1.50699 * 119.99775 * 179.78757 * 4 3 2 6 6 H 1.09004 * 112.84906 * 348.53081 * 5 4 3 7 7 C 1.53779 * 113.61362 * 119.72961 * 5 4 3 8 8 C 1.53780 * 87.07975 * 140.06306 * 7 5 4 9 9 H 1.09006 * 113.61029 * 219.93265 * 8 7 5 10 10 N 1.46498 * 113.61525 * 89.11667 * 8 7 5 11 11 C 1.34783 * 119.99869 * 154.99748 * 10 8 7 12 12 O 1.21588 * 119.99768 * 359.97438 * 11 10 8 13 13 C 1.47532 * 119.99580 * 180.02562 * 11 10 8 14 14 C 1.40142 * 120.19044 * 180.02562 * 13 11 10 15 15 O 1.35658 * 120.14787 * 359.94902 * 14 13 11 16 16 C 1.38704 * 119.70203 * 179.97438 * 14 13 11 17 17 C 1.50700 * 119.95693 * 179.97438 * 16 14 13 18 18 O 1.42901 * 109.47572 * 285.00157 * 17 16 14 19 19 Si 1.86306 * 109.46978 * 165.00077 * 17 16 14 20 20 C 1.38058 * 120.08199 * 359.72647 * 16 14 13 21 21 C 1.38542 * 120.39134 * 0.54999 * 20 16 14 22 22 C 1.50703 * 119.85100 * 179.72365 * 21 20 16 23 23 C 1.37789 * 120.30190 * 359.44373 * 21 20 16 24 24 C 1.53776 * 87.08306 * 334.56295 * 8 7 5 25 25 C 1.38207 * 119.99883 * 359.51261 * 4 3 2 26 26 C 1.38258 * 119.99904 * 0.27794 * 25 4 3 27 27 C 1.38213 * 120.00466 * 359.97426 * 26 25 4 28 28 H 1.09001 * 109.47386 * 270.17047 * 1 2 3 29 29 H 1.09008 * 109.46719 * 30.16782 * 1 2 3 30 30 H 1.08995 * 109.47402 * 150.16419 * 1 2 3 31 31 H 1.07998 * 119.99519 * 0.06431 * 3 2 1 32 32 H 1.08998 * 113.61634 * 25.50873 * 7 5 4 33 33 H 1.09002 * 113.68571 * 254.62218 * 7 5 4 34 34 H 0.96996 * 119.99769 * 334.99716 * 10 8 7 35 35 H 0.96705 * 113.99430 * 90.00142 * 15 14 13 36 36 H 1.09001 * 109.47025 * 45.00739 * 17 16 14 37 37 H 0.96697 * 114.00048 * 300.00161 * 18 17 16 38 38 H 1.48498 * 110.00003 * 180.02562 * 19 17 16 39 39 H 1.48499 * 110.00265 * 301.32319 * 19 17 16 40 40 H 1.08003 * 119.80143 * 180.26729 * 20 16 14 41 41 H 1.09002 * 109.47152 * 269.72444 * 22 21 20 42 42 H 1.09001 * 109.46980 * 149.72545 * 22 21 20 43 43 H 1.09004 * 109.47113 * 29.72525 * 22 21 20 44 44 H 1.07992 * 120.04815 * 180.24889 * 23 21 20 45 45 H 1.09000 * 113.61172 * 139.97872 * 24 8 7 46 46 H 1.08997 * 113.61645 * 270.88684 * 24 8 7 47 47 H 1.07994 * 120.00039 * 180.25171 * 25 4 3 48 48 H 1.08000 * 119.99749 * 179.97438 * 26 25 4 49 49 H 1.07999 * 120.00145 * 179.97438 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.1981 1.1969 0.0000 4 6 3.5808 1.1969 -0.0057 5 6 4.3342 2.5020 -0.0105 6 1 3.6925 3.3605 -0.2088 7 6 5.2524 2.6877 1.2090 8 6 6.2803 3.3003 0.2431 9 1 7.3076 3.0014 0.4517 10 7 6.1329 4.7475 0.0699 11 6 7.1921 5.4929 -0.3032 12 8 8.2700 4.9642 -0.4955 13 6 7.0438 6.9504 -0.4770 14 6 8.1422 7.7292 -0.8653 15 8 9.3479 7.1465 -1.0823 16 6 7.9912 9.0986 -1.0263 17 6 9.1687 9.9417 -1.4432 18 8 10.0545 10.1047 -0.3337 19 14 8.5675 11.6120 -2.0085 20 6 6.7624 9.6894 -0.8101 21 6 5.6754 8.9238 -0.4207 22 6 4.3410 9.5824 -0.1819 23 6 5.8073 7.5622 -0.2561 24 6 5.6103 2.4754 -0.8684 25 6 4.2717 -0.0001 -0.0012 26 6 3.5804 -1.1974 0.0032 27 6 2.1982 -1.1974 0.0036 28 1 -0.3634 0.0031 1.0277 29 1 -0.3633 0.8886 -0.5165 30 1 -0.3634 -0.8914 -0.5112 31 1 1.6582 2.1322 0.0010 32 1 5.5791 1.7490 1.6566 33 1 4.8674 3.3953 1.9433 34 1 5.2731 5.1693 0.2237 35 1 9.4850 6.8541 -1.9938 36 1 9.6965 9.4499 -2.2604 37 1 9.6510 10.5367 0.4315 38 1 9.7192 12.4528 -2.4229 39 1 7.6206 11.4543 -3.1415 40 1 6.6489 10.7555 -0.9410 41 1 4.2666 9.8844 0.8627 42 1 3.5418 8.8786 -0.4145 43 1 4.2495 10.4603 -0.8214 44 1 4.9563 6.9688 0.0437 45 1 5.5132 3.0121 -1.8121 46 1 6.0349 1.4788 -0.9888 47 1 5.3517 -0.0001 -0.0015 48 1 4.1203 -2.1327 0.0063 49 1 1.6582 -2.1327 0.0066 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9650858_13422088.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:51:36 Heat of formation + Delta-G solvation = -35.903382 kcal Electronic energy + Delta-G solvation = -30529.198118 eV Core-core repulsion = 26388.324426 eV Total energy + Delta-G solvation = -4140.873691 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.166 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -41.91143 -41.21306 -39.99115 -38.76341 -38.00304 -37.54460 -34.78473 -33.50911 -33.12175 -32.71787 -31.64192 -27.86918 -27.69301 -26.85251 -26.76186 -26.49475 -24.86402 -23.08284 -22.28460 -21.88727 -21.52942 -19.93258 -19.51333 -18.49501 -17.93048 -17.63159 -17.38363 -16.84739 -16.77516 -16.29150 -16.16418 -16.01646 -15.74776 -15.49264 -15.20026 -14.94191 -14.86186 -14.76023 -14.65460 -14.37828 -14.17679 -14.04409 -13.81774 -13.75914 -13.54885 -13.41852 -13.13112 -13.08118 -12.83465 -12.70680 -12.61419 -12.20442 -12.16839 -12.05026 -11.75767 -11.70388 -11.68843 -11.20957 -10.84114 -10.38103 -10.22250 -10.03089 -9.68140 -9.56436 -9.45080 -5.11594 -0.37197 0.01747 0.42093 0.48692 1.20802 1.57134 1.74842 1.90658 2.03254 2.55211 2.78376 3.14953 3.33656 3.39553 3.47553 3.54529 3.60660 3.65358 3.67544 3.86593 3.95515 4.00597 4.01573 4.04580 4.10960 4.21627 4.23572 4.38204 4.43071 4.49817 4.50941 4.54421 4.59183 4.65232 4.66920 4.68807 4.72643 4.78788 4.86174 4.87409 4.92804 4.94092 4.95207 5.06879 5.14237 5.15928 5.24000 5.26186 5.50790 5.54819 5.58157 5.69256 5.72898 6.11172 6.44035 6.59397 6.73940 7.22216 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.084 4.084 3 C -0.118 4.118 4 C -0.068 4.068 5 C -0.073 4.073 6 H 0.095 0.905 7 C -0.135 4.135 8 C 0.120 3.880 9 H 0.107 0.893 10 N -0.711 5.711 11 C 0.562 3.438 12 O -0.514 6.514 13 C -0.164 4.164 14 C 0.191 3.809 15 O -0.467 6.467 16 C -0.154 4.154 17 C -0.059 4.059 18 O -0.530 6.530 19 Si 0.683 3.317 20 C -0.073 4.073 21 C -0.097 4.097 22 C -0.117 4.117 23 C -0.068 4.068 24 C -0.143 4.143 25 C -0.123 4.123 26 C -0.113 4.113 27 C -0.125 4.125 28 H 0.071 0.929 29 H 0.066 0.934 30 H 0.067 0.933 31 H 0.119 0.881 32 H 0.099 0.901 33 H 0.076 0.924 34 H 0.399 0.601 35 H 0.393 0.607 36 H 0.112 0.888 37 H 0.377 0.623 38 H -0.251 1.251 39 H -0.255 1.255 40 H 0.137 0.863 41 H 0.077 0.923 42 H 0.070 0.930 43 H 0.072 0.928 44 H 0.131 0.869 45 H 0.074 0.926 46 H 0.096 0.904 47 H 0.122 0.878 48 H 0.122 0.878 49 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.248 2.490 1.107 7.743 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.084 4.084 3 C -0.136 4.136 4 C -0.068 4.068 5 C -0.091 4.091 6 H 0.114 0.886 7 C -0.173 4.173 8 C 0.015 3.985 9 H 0.125 0.875 10 N -0.364 5.364 11 C 0.349 3.651 12 O -0.390 6.390 13 C -0.168 4.168 14 C 0.143 3.857 15 O -0.277 6.277 16 C -0.155 4.155 17 C -0.169 4.169 18 O -0.335 6.335 19 Si 0.584 3.416 20 C -0.090 4.090 21 C -0.097 4.097 22 C -0.174 4.174 23 C -0.086 4.086 24 C -0.182 4.182 25 C -0.141 4.141 26 C -0.131 4.131 27 C -0.143 4.143 28 H 0.090 0.910 29 H 0.085 0.915 30 H 0.086 0.914 31 H 0.137 0.863 32 H 0.118 0.882 33 H 0.095 0.905 34 H 0.234 0.766 35 H 0.252 0.748 36 H 0.129 0.871 37 H 0.224 0.776 38 H -0.176 1.176 39 H -0.180 1.180 40 H 0.154 0.846 41 H 0.096 0.904 42 H 0.089 0.911 43 H 0.091 0.909 44 H 0.148 0.852 45 H 0.092 0.908 46 H 0.114 0.886 47 H 0.140 0.860 48 H 0.140 0.860 49 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -5.977 2.485 0.472 6.490 hybrid contribution -0.441 -0.671 -0.549 0.973 sum -6.418 1.814 -0.077 6.670 Atomic orbital electron populations 1.20816 0.91127 1.02910 1.02475 1.19948 0.96148 0.93165 0.99133 1.20923 0.93493 0.97559 1.01578 1.19647 0.93385 0.94341 0.99401 1.21580 0.95014 0.95209 0.97311 0.88642 1.23427 0.95672 1.01964 0.96242 1.21853 1.00788 0.79426 0.96428 0.87532 1.45578 1.12753 1.07431 1.70626 1.18025 0.84001 0.86015 0.77031 1.90842 1.25901 1.73179 1.49068 1.20378 0.94455 0.93557 1.08389 1.18230 0.84107 0.89285 0.94036 1.84813 1.30137 1.78838 1.33930 1.20742 0.96136 0.94375 1.04228 1.24943 0.91641 1.07038 0.93306 1.86585 1.38071 1.83146 1.25694 0.94994 0.81934 0.78411 0.86288 1.20981 0.91418 0.99441 0.97198 1.19799 0.96394 0.93264 1.00264 1.20844 0.92671 1.00966 1.02886 1.21123 0.95744 0.94527 0.97236 1.23566 0.95307 1.01210 0.98099 1.20992 0.99916 0.91933 1.01236 1.21154 0.94327 0.98074 0.99519 1.21075 0.94355 0.97602 1.01270 0.91048 0.91506 0.91438 0.86254 0.88248 0.90496 0.76579 0.74836 0.87109 0.77642 1.17600 1.17976 0.84587 0.90422 0.91116 0.90904 0.85153 0.90772 0.88556 0.85992 0.85976 0.86130 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.11 10.01 36.00 0.36 0.47 16 2 C -0.08 -0.07 5.88 -104.62 -0.62 -0.68 16 3 C -0.12 -0.07 9.37 -39.58 -0.37 -0.44 16 4 C -0.07 -0.02 5.29 -104.62 -0.55 -0.57 16 5 C -0.07 0.10 3.85 -90.96 -0.35 -0.25 16 6 H 0.10 -0.22 8.10 -51.93 -0.42 -0.64 16 7 C -0.14 0.21 7.29 -25.92 -0.19 0.02 16 8 C 0.12 -0.02 4.32 -67.12 -0.29 -0.31 16 9 H 0.11 0.19 7.46 -51.93 -0.39 -0.20 16 10 N -0.71 0.17 5.21 -54.06 -0.28 -0.11 16 11 C 0.56 1.61 7.76 -12.47 -0.10 1.52 16 12 O -0.51 -3.41 14.76 -16.59 -0.24 -3.66 16 13 C -0.16 -0.25 5.89 -104.84 -0.62 -0.86 16 14 C 0.19 0.45 6.69 -38.70 -0.26 0.19 16 15 O -0.47 -1.79 10.91 -40.55 -0.44 -2.23 16 16 C -0.15 -0.06 5.27 -104.52 -0.55 -0.61 16 17 C -0.06 -0.02 2.38 36.01 0.09 0.07 16 18 O -0.53 -0.83 12.88 -35.23 -0.45 -1.28 16 19 Si 0.68 -0.92 29.91 -169.99 -5.08 -6.00 16 20 C -0.07 0.11 8.30 -39.54 -0.33 -0.22 16 21 C -0.10 0.18 5.87 -104.67 -0.61 -0.43 16 22 C -0.12 0.48 10.00 36.01 0.36 0.84 16 23 C -0.07 0.09 9.18 -39.20 -0.36 -0.27 16 24 C -0.14 0.09 7.26 -25.92 -0.19 -0.10 16 25 C -0.12 -0.06 8.61 -39.59 -0.34 -0.40 16 26 C -0.11 -0.08 10.05 -39.58 -0.40 -0.48 16 27 C -0.13 -0.11 9.70 -39.58 -0.38 -0.50 16 28 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 29 H 0.07 -0.10 8.09 -51.92 -0.42 -0.52 16 30 H 0.07 -0.09 8.09 -51.93 -0.42 -0.51 16 31 H 0.12 -0.11 8.06 -52.49 -0.42 -0.54 16 32 H 0.10 -0.15 7.72 -51.93 -0.40 -0.55 16 33 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 34 H 0.40 -1.14 6.73 -40.82 -0.27 -1.42 16 35 H 0.39 0.16 9.06 45.56 0.41 0.57 16 36 H 0.11 0.08 7.83 -51.93 -0.41 -0.32 16 37 H 0.38 -0.95 8.70 45.56 0.40 -0.56 16 38 H -0.25 -0.52 7.11 56.52 0.40 -0.12 16 39 H -0.26 -0.19 7.11 56.52 0.40 0.21 16 40 H 0.14 -0.55 5.09 -52.48 -0.27 -0.82 16 41 H 0.08 -0.36 8.14 -51.93 -0.42 -0.78 16 42 H 0.07 -0.33 8.08 -51.93 -0.42 -0.75 16 43 H 0.07 -0.34 8.08 -51.93 -0.42 -0.76 16 44 H 0.13 -0.52 6.40 -52.49 -0.34 -0.86 16 45 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 46 H 0.10 -0.07 6.32 -51.93 -0.33 -0.40 16 47 H 0.12 -0.10 6.66 -52.49 -0.35 -0.45 16 48 H 0.12 -0.10 8.06 -52.49 -0.42 -0.53 16 49 H 0.12 -0.06 8.06 -52.49 -0.42 -0.48 16 LS Contribution 400.01 15.07 6.03 6.03 Total: 0.00 -9.83 400.01 -12.38 -22.21 By element: Atomic # 1 Polarization: -5.73 SS G_CDS: -6.20 Total: -11.93 kcal Atomic # 6 Polarization: 2.67 SS G_CDS: -5.70 Total: -3.03 kcal Atomic # 7 Polarization: 0.17 SS G_CDS: -0.28 Total: -0.11 kcal Atomic # 8 Polarization: -6.03 SS G_CDS: -1.14 Total: -7.17 kcal Atomic # 14 Polarization: -0.92 SS G_CDS: -5.08 Total: -6.00 kcal Total LS contribution 6.03 Total: 6.03 kcal Total: -9.83 -12.38 -22.21 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9650858_13422088.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -13.696 kcal (2) G-P(sol) polarization free energy of solvation -9.831 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -23.527 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.376 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.207 kcal (6) G-S(sol) free energy of system = (1) + (5) -35.903 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds