Wall clock time and date at job start Tue Mar 9 2021 12:51:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.38218 * 119.99968 * 2 1 4 4 C 1.38261 * 119.99743 * 179.78900 * 3 2 1 5 5 C 1.50699 * 119.99760 * 180.27484 * 4 3 2 6 6 H 1.09000 * 112.84733 * 348.96999 * 5 4 3 7 7 C 1.53785 * 113.61161 * 120.16732 * 5 4 3 8 8 C 1.53781 * 87.07803 * 139.97984 * 7 5 4 9 9 H 1.08998 * 113.61285 * 220.01704 * 8 7 5 10 10 N 1.46504 * 113.61344 * 89.20062 * 8 7 5 11 11 C 1.34771 * 119.99874 * 154.99754 * 10 8 7 12 12 O 1.21661 * 120.00414 * 0.02562 * 11 10 8 13 13 C 1.47042 * 120.00042 * 179.97438 * 11 10 8 14 14 C 1.36227 * 123.49356 * 180.02562 * 13 11 10 15 15 Cl 1.73600 * 124.60398 * 0.02562 * 14 13 11 16 16 S 1.70446 * 110.79101 * 180.02562 * 14 13 11 17 17 C 1.75492 * 92.46427 * 359.97438 * 16 14 13 18 18 C 1.50707 * 124.68776 * 180.02562 * 17 16 14 19 19 O 1.42895 * 109.47043 * 244.97693 * 18 17 16 20 20 Si 1.86303 * 109.46730 * 4.97567 * 18 17 16 21 21 C 1.32697 * 110.63134 * 359.71277 * 17 16 14 22 22 C 1.53782 * 113.61086 * 217.66268 * 5 4 3 23 23 C 1.38210 * 119.99851 * 0.44342 * 4 3 2 24 24 C 1.38258 * 120.00225 * 359.80772 * 23 4 3 25 25 C 1.38212 * 119.99786 * 359.97438 * 24 23 4 26 26 H 1.09002 * 109.47152 * 269.72462 * 1 2 3 27 27 H 1.09001 * 109.46980 * 149.72562 * 1 2 3 28 28 H 1.09004 * 109.47113 * 29.72543 * 1 2 3 29 29 H 1.07998 * 120.00075 * 359.97438 * 3 2 1 30 30 H 1.09000 * 113.61399 * 254.52987 * 7 5 4 31 31 H 1.08999 * 113.61383 * 25.34695 * 7 5 4 32 32 H 0.96991 * 120.00135 * 334.99821 * 10 8 7 33 33 H 1.08991 * 109.47201 * 124.97236 * 18 17 16 34 34 H 0.96695 * 114.00302 * 59.99583 * 19 18 17 35 35 H 1.48500 * 110.00033 * 180.02562 * 20 18 17 36 36 H 1.48506 * 109.99882 * 301.31907 * 20 18 17 37 37 H 1.08001 * 123.45215 * 180.24668 * 21 17 16 38 38 H 1.08988 * 113.61739 * 334.56785 * 22 5 4 39 39 H 1.09003 * 113.60943 * 105.47584 * 22 5 4 40 40 H 1.07998 * 119.99939 * 179.83954 * 23 4 3 41 41 H 1.07997 * 120.00126 * 179.97438 * 24 23 4 42 42 H 1.08005 * 119.99681 * 180.02562 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1981 1.1970 0.0000 4 6 3.5807 1.1970 0.0044 5 6 4.3342 2.5020 0.0107 6 1 3.6926 3.3621 -0.1810 7 6 5.2515 2.6778 1.2324 8 6 6.2809 3.2963 0.2718 9 1 7.3075 2.9936 0.4781 10 7 6.1365 4.7453 0.1105 11 6 7.1973 5.4914 -0.2561 12 8 8.2746 4.9618 -0.4536 13 6 7.0523 6.9456 -0.4186 14 6 8.0752 7.7667 -0.7865 15 17 9.6942 7.2361 -1.1195 16 16 7.5495 9.3856 -0.8755 17 6 5.9125 8.9591 -0.4084 18 6 4.7795 9.9417 -0.2597 19 8 4.3647 9.9871 1.1070 20 14 5.3508 11.6333 -0.7918 21 6 5.8084 7.6511 -0.2108 22 6 5.6109 2.4803 -0.8463 23 6 4.2717 0.0000 -0.0004 24 6 3.5804 -1.1973 -0.0057 25 6 2.1983 -1.1973 -0.0056 26 1 -0.3633 -0.0049 1.0277 27 1 -0.3633 -0.8875 -0.5181 28 1 -0.3633 0.8925 -0.5096 29 1 1.6581 2.1323 -0.0004 30 1 4.8656 3.3809 1.9706 31 1 5.5756 1.7356 1.6742 32 1 5.2776 5.1675 0.2676 33 1 3.9424 9.6282 -0.8833 34 1 5.0608 10.2592 1.7205 35 1 4.2428 12.6117 -0.6493 36 1 6.5123 12.0589 0.0299 37 1 4.8892 7.1642 0.0798 38 1 6.0344 1.4841 -0.9736 39 1 5.5151 3.0240 -1.7862 40 1 5.3517 0.0000 0.0004 41 1 4.1204 -2.1326 -0.0099 42 1 1.6583 -2.1326 -0.0092 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9650858_13431040.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:51:46 Heat of formation + Delta-G solvation = 10.775297 kcal Electronic energy + Delta-G solvation = -26673.375687 eV Core-core repulsion = 22738.098401 eV Total energy + Delta-G solvation = -3935.277287 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.069 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -41.65125 -40.56551 -39.32480 -38.69693 -37.86808 -37.05253 -34.67275 -33.32118 -31.96014 -31.61030 -27.86856 -27.13838 -26.74083 -26.73014 -25.18442 -23.06538 -22.40501 -21.96630 -20.86892 -19.86133 -19.47158 -18.14076 -17.93230 -17.58898 -16.98088 -16.62687 -16.41603 -16.12830 -15.93376 -15.86204 -15.71013 -15.01515 -14.88846 -14.75456 -14.47900 -14.43176 -14.27396 -14.02478 -13.99739 -13.72898 -13.50191 -13.11326 -13.05503 -12.78311 -12.67929 -12.60910 -12.48917 -12.19153 -12.01464 -11.89878 -11.72408 -11.67758 -11.19270 -11.00067 -10.72146 -10.11999 -9.92663 -9.72448 -9.66088 -9.43087 -5.22419 -0.62245 -0.22605 0.40667 0.44104 0.50675 0.66303 1.01411 1.07642 1.38144 1.75516 2.11632 2.24890 2.80380 3.06077 3.32334 3.41247 3.63193 3.66734 3.79328 3.83769 3.89504 3.97499 4.03715 4.12246 4.23578 4.25231 4.33902 4.45143 4.52636 4.60610 4.64748 4.68893 4.70684 4.74128 4.80572 4.87054 4.88570 4.96816 4.97962 5.10275 5.17486 5.25981 5.53456 5.60029 5.71225 5.75032 6.13132 6.13176 6.43647 7.19770 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.084 4.084 3 C -0.118 4.118 4 C -0.067 4.067 5 C -0.073 4.073 6 H 0.096 0.904 7 C -0.135 4.135 8 C 0.121 3.879 9 H 0.107 0.893 10 N -0.707 5.707 11 C 0.579 3.421 12 O -0.516 6.516 13 C -0.159 4.159 14 C -0.114 4.114 15 Cl 0.027 6.973 16 S 0.239 5.761 17 C -0.234 4.234 18 C -0.031 4.031 19 O -0.522 6.522 20 Si 0.645 3.355 21 C -0.070 4.070 22 C -0.143 4.143 23 C -0.123 4.123 24 C -0.113 4.113 25 C -0.125 4.125 26 H 0.071 0.929 27 H 0.067 0.933 28 H 0.066 0.934 29 H 0.120 0.880 30 H 0.076 0.924 31 H 0.099 0.901 32 H 0.400 0.600 33 H 0.132 0.868 34 H 0.379 0.621 35 H -0.230 1.230 36 H -0.236 1.236 37 H 0.157 0.843 38 H 0.096 0.904 39 H 0.075 0.925 40 H 0.122 0.878 41 H 0.122 0.878 42 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.541 2.020 -0.647 4.128 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.084 4.084 3 C -0.136 4.136 4 C -0.067 4.067 5 C -0.092 4.092 6 H 0.114 0.886 7 C -0.173 4.173 8 C 0.016 3.984 9 H 0.125 0.875 10 N -0.358 5.358 11 C 0.364 3.636 12 O -0.392 6.392 13 C -0.178 4.178 14 C -0.261 4.261 15 Cl 0.057 6.943 16 S 0.503 5.497 17 C -0.351 4.351 18 C -0.144 4.144 19 O -0.328 6.328 20 Si 0.544 3.456 21 C -0.099 4.099 22 C -0.182 4.182 23 C -0.141 4.141 24 C -0.131 4.131 25 C -0.143 4.143 26 H 0.089 0.911 27 H 0.086 0.914 28 H 0.085 0.915 29 H 0.138 0.862 30 H 0.095 0.905 31 H 0.117 0.883 32 H 0.235 0.765 33 H 0.149 0.851 34 H 0.228 0.772 35 H -0.153 1.153 36 H -0.159 1.159 37 H 0.174 0.826 38 H 0.114 0.886 39 H 0.093 0.907 40 H 0.140 0.860 41 H 0.140 0.860 42 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -2.312 3.597 -1.199 4.441 hybrid contribution -0.856 -1.615 1.485 2.355 sum -3.168 1.982 0.286 3.748 Atomic orbital electron populations 1.20819 0.91137 1.02911 1.02468 1.19947 0.96146 0.93169 0.99136 1.20934 0.93518 0.97567 1.01539 1.19651 0.93379 0.94354 0.99356 1.21590 0.95044 0.95230 0.97294 0.88585 1.23426 0.95683 1.01930 0.96273 1.21852 1.00784 0.79279 0.96500 0.87487 1.45477 1.12641 1.07255 1.70458 1.17386 0.84148 0.85092 0.76971 1.90884 1.26065 1.73006 1.49211 1.20214 0.92843 0.94845 1.09908 1.25543 0.93278 1.00489 1.06806 1.98444 1.13869 1.89489 1.92546 1.83412 1.01042 1.01138 1.64069 1.24749 0.99285 0.99158 1.11910 1.24394 0.97193 1.05755 0.87039 1.86639 1.40833 1.89858 1.15499 0.95197 0.82830 0.76324 0.91296 1.21005 0.97103 0.92432 0.99399 1.23565 0.95236 1.01238 0.98117 1.20991 0.99907 0.91926 1.01254 1.21151 0.94323 0.98070 0.99554 1.21070 0.94359 0.97592 1.01301 0.91063 0.91446 0.91493 0.86238 0.90513 0.88261 0.76464 0.85067 0.77247 1.15265 1.15948 0.82585 0.88551 0.90663 0.85988 0.85990 0.86146 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.09 10.01 36.01 0.36 0.45 16 2 C -0.08 -0.09 5.88 -104.62 -0.62 -0.70 16 3 C -0.12 -0.09 9.36 -39.58 -0.37 -0.46 16 4 C -0.07 -0.03 5.29 -104.62 -0.55 -0.58 16 5 C -0.07 0.09 3.86 -90.96 -0.35 -0.26 16 6 H 0.10 -0.20 8.09 -51.93 -0.42 -0.62 16 7 C -0.14 0.21 7.29 -25.92 -0.19 0.02 16 8 C 0.12 -0.04 4.32 -67.11 -0.29 -0.33 16 9 H 0.11 0.14 7.46 -51.93 -0.39 -0.24 16 10 N -0.71 0.25 5.25 -54.21 -0.28 -0.04 16 11 C 0.58 1.48 7.79 -12.69 -0.10 1.38 16 12 O -0.52 -3.09 14.51 5.22 0.08 -3.01 16 13 C -0.16 -0.19 5.98 -104.59 -0.63 -0.81 16 14 C -0.11 -0.18 6.87 30.01 0.21 0.02 16 15 Cl 0.03 0.09 27.20 -51.86 -1.41 -1.32 16 16 S 0.24 -0.25 20.19 -107.50 -2.17 -2.42 16 17 C -0.23 0.42 5.65 -36.19 -0.20 0.21 16 18 C -0.03 0.08 2.94 36.01 0.11 0.19 16 19 O -0.52 0.66 12.88 -35.23 -0.45 0.21 16 20 Si 0.65 -1.68 30.92 -169.99 -5.26 -6.93 16 21 C -0.07 0.09 9.75 -39.00 -0.38 -0.29 16 22 C -0.14 0.09 7.26 -25.92 -0.19 -0.10 16 23 C -0.12 -0.07 8.61 -39.58 -0.34 -0.41 16 24 C -0.11 -0.09 10.05 -39.58 -0.40 -0.49 16 25 C -0.13 -0.13 9.70 -39.59 -0.38 -0.51 16 26 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 27 H 0.07 -0.08 8.09 -51.93 -0.42 -0.50 16 28 H 0.07 -0.09 8.08 -51.93 -0.42 -0.51 16 29 H 0.12 -0.08 8.05 -52.49 -0.42 -0.50 16 30 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 31 H 0.10 -0.15 7.72 -51.93 -0.40 -0.55 16 32 H 0.40 -1.11 7.25 -40.82 -0.30 -1.40 16 33 H 0.13 -0.49 7.96 -51.93 -0.41 -0.90 16 34 H 0.38 -1.47 8.70 45.56 0.40 -1.07 16 35 H -0.23 -0.05 7.11 56.52 0.40 0.35 16 36 H -0.24 0.22 7.11 56.52 0.40 0.62 16 37 H 0.16 -0.53 7.10 -52.49 -0.37 -0.91 16 38 H 0.10 -0.07 6.31 -51.94 -0.33 -0.40 16 39 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 40 H 0.12 -0.10 6.66 -52.49 -0.35 -0.45 16 41 H 0.12 -0.09 8.06 -52.49 -0.42 -0.52 16 42 H 0.12 -0.05 8.06 -52.48 -0.42 -0.47 16 LS Contribution 377.79 15.07 5.69 5.69 Total: 0.00 -6.79 377.79 -13.27 -20.06 By element: Atomic # 1 Polarization: -4.40 SS G_CDS: -5.14 Total: -9.55 kcal Atomic # 6 Polarization: 1.64 SS G_CDS: -4.32 Total: -2.68 kcal Atomic # 7 Polarization: 0.25 SS G_CDS: -0.28 Total: -0.04 kcal Atomic # 8 Polarization: -2.42 SS G_CDS: -0.38 Total: -2.80 kcal Atomic # 14 Polarization: -1.68 SS G_CDS: -5.26 Total: -6.93 kcal Atomic # 16 Polarization: -0.25 SS G_CDS: -2.17 Total: -2.42 kcal Atomic # 17 Polarization: 0.09 SS G_CDS: -1.41 Total: -1.32 kcal Total LS contribution 5.69 Total: 5.69 kcal Total: -6.79 -13.27 -20.06 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9650858_13431040.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 30.834 kcal (2) G-P(sol) polarization free energy of solvation -6.792 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 24.042 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.267 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.059 kcal (6) G-S(sol) free energy of system = (1) + (5) 10.775 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds