Wall clock time and date at job start Tue Mar 9 2021 12:51:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.38218 * 119.99968 * 2 1 4 4 C 1.38261 * 119.99743 * 179.78900 * 3 2 1 5 5 C 1.50699 * 119.99760 * 180.27484 * 4 3 2 6 6 H 1.09000 * 112.84733 * 348.96999 * 5 4 3 7 7 C 1.53785 * 113.61161 * 120.16732 * 5 4 3 8 8 C 1.53781 * 87.07803 * 139.97984 * 7 5 4 9 9 H 1.08998 * 113.61285 * 220.01704 * 8 7 5 10 10 N 1.46504 * 113.61344 * 89.20062 * 8 7 5 11 11 C 1.34771 * 119.99874 * 154.99754 * 10 8 7 12 12 O 1.21661 * 120.00414 * 0.02562 * 11 10 8 13 13 C 1.47042 * 120.00042 * 179.97438 * 11 10 8 14 14 C 1.36227 * 123.49356 * 180.02562 * 13 11 10 15 15 Cl 1.73600 * 124.60398 * 0.02562 * 14 13 11 16 16 S 1.70446 * 110.79101 * 180.02562 * 14 13 11 17 17 C 1.75492 * 92.46427 * 359.97438 * 16 14 13 18 18 C 1.50707 * 124.68776 * 180.02562 * 17 16 14 19 19 O 1.42895 * 109.47043 * 244.97693 * 18 17 16 20 20 Si 1.86303 * 109.46730 * 4.97567 * 18 17 16 21 21 C 1.32697 * 110.63134 * 359.71277 * 17 16 14 22 22 C 1.53782 * 113.61086 * 217.66268 * 5 4 3 23 23 C 1.38210 * 119.99851 * 0.44342 * 4 3 2 24 24 C 1.38258 * 120.00225 * 359.80772 * 23 4 3 25 25 C 1.38212 * 119.99786 * 359.97438 * 24 23 4 26 26 H 1.09002 * 109.47152 * 269.72462 * 1 2 3 27 27 H 1.09001 * 109.46980 * 149.72562 * 1 2 3 28 28 H 1.09004 * 109.47113 * 29.72543 * 1 2 3 29 29 H 1.07998 * 120.00075 * 359.97438 * 3 2 1 30 30 H 1.09000 * 113.61399 * 254.52987 * 7 5 4 31 31 H 1.08999 * 113.61383 * 25.34695 * 7 5 4 32 32 H 0.96991 * 120.00135 * 334.99821 * 10 8 7 33 33 H 1.08991 * 109.47201 * 124.97236 * 18 17 16 34 34 H 0.96695 * 114.00302 * 59.99583 * 19 18 17 35 35 H 1.48500 * 110.00033 * 180.02562 * 20 18 17 36 36 H 1.48506 * 109.99882 * 301.31907 * 20 18 17 37 37 H 1.08001 * 123.45215 * 180.24668 * 21 17 16 38 38 H 1.08988 * 113.61739 * 334.56785 * 22 5 4 39 39 H 1.09003 * 113.60943 * 105.47584 * 22 5 4 40 40 H 1.07998 * 119.99939 * 179.83954 * 23 4 3 41 41 H 1.07997 * 120.00126 * 179.97438 * 24 23 4 42 42 H 1.08005 * 119.99681 * 180.02562 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1981 1.1970 0.0000 4 6 3.5807 1.1970 0.0044 5 6 4.3342 2.5020 0.0107 6 1 3.6926 3.3621 -0.1810 7 6 5.2515 2.6778 1.2324 8 6 6.2809 3.2963 0.2718 9 1 7.3075 2.9936 0.4781 10 7 6.1365 4.7453 0.1105 11 6 7.1973 5.4914 -0.2561 12 8 8.2746 4.9618 -0.4536 13 6 7.0523 6.9456 -0.4186 14 6 8.0752 7.7667 -0.7865 15 17 9.6942 7.2361 -1.1195 16 16 7.5495 9.3856 -0.8755 17 6 5.9125 8.9591 -0.4084 18 6 4.7795 9.9417 -0.2597 19 8 4.3647 9.9871 1.1070 20 14 5.3508 11.6333 -0.7918 21 6 5.8084 7.6511 -0.2108 22 6 5.6109 2.4803 -0.8463 23 6 4.2717 0.0000 -0.0004 24 6 3.5804 -1.1973 -0.0057 25 6 2.1983 -1.1973 -0.0056 26 1 -0.3633 -0.0049 1.0277 27 1 -0.3633 -0.8875 -0.5181 28 1 -0.3633 0.8925 -0.5096 29 1 1.6581 2.1323 -0.0004 30 1 4.8656 3.3809 1.9706 31 1 5.5756 1.7356 1.6742 32 1 5.2776 5.1675 0.2676 33 1 3.9424 9.6282 -0.8833 34 1 5.0608 10.2592 1.7205 35 1 4.2428 12.6117 -0.6493 36 1 6.5123 12.0589 0.0299 37 1 4.8892 7.1642 0.0798 38 1 6.0344 1.4841 -0.9736 39 1 5.5151 3.0240 -1.7862 40 1 5.3517 0.0000 0.0004 41 1 4.1204 -2.1326 -0.0099 42 1 1.6583 -2.1326 -0.0092 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9650858_13431040.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:51:46 Heat of formation + Delta-G solvation = 16.720059 kcal Electronic energy + Delta-G solvation = -26673.117903 eV Core-core repulsion = 22738.098401 eV Total energy + Delta-G solvation = -3935.019502 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.069 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -41.67458 -40.59990 -39.27185 -38.67467 -37.95915 -37.02949 -34.73335 -33.30455 -31.94704 -31.56349 -27.82232 -27.10300 -26.68115 -26.65877 -25.17417 -23.05325 -22.35141 -21.97210 -20.87569 -19.83789 -19.45007 -18.05595 -17.89301 -17.57110 -16.99448 -16.52323 -16.41811 -16.13761 -15.95353 -15.79159 -15.73044 -15.00061 -14.84002 -14.71886 -14.47772 -14.41406 -14.30371 -13.98529 -13.93853 -13.70679 -13.44177 -13.03025 -12.96237 -12.78205 -12.65564 -12.61098 -12.48972 -12.17968 -12.09115 -11.80693 -11.69125 -11.63221 -11.16486 -11.00729 -10.73016 -10.19548 -9.89797 -9.67373 -9.66466 -9.43249 -5.03556 -0.64156 -0.19590 0.43084 0.47481 0.49480 0.71131 1.03883 1.18917 1.53018 1.90403 2.09336 2.14522 2.79961 3.24319 3.46760 3.47764 3.68420 3.70649 3.82458 3.88204 3.94913 4.01807 4.08031 4.20068 4.27238 4.37116 4.50322 4.53488 4.56324 4.65215 4.76589 4.77488 4.77830 4.80792 4.86030 4.92742 4.96571 5.01060 5.03909 5.14978 5.20210 5.31343 5.52801 5.59594 5.71806 5.75817 6.14752 6.41781 6.43499 7.12407 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.116 4.116 2 C -0.097 4.097 3 C -0.129 4.129 4 C -0.073 4.073 5 C -0.064 4.064 6 H 0.111 0.889 7 C -0.124 4.124 8 C 0.118 3.882 9 H 0.087 0.913 10 N -0.691 5.691 11 C 0.573 3.427 12 O -0.559 6.559 13 C -0.167 4.167 14 C -0.139 4.139 15 Cl 0.003 6.997 16 S 0.263 5.737 17 C -0.225 4.225 18 C -0.028 4.028 19 O -0.535 6.535 20 Si 0.702 3.298 21 C -0.067 4.067 22 C -0.141 4.141 23 C -0.134 4.134 24 C -0.125 4.125 25 C -0.141 4.141 26 H 0.075 0.925 27 H 0.070 0.930 28 H 0.073 0.927 29 H 0.133 0.867 30 H 0.087 0.913 31 H 0.099 0.901 32 H 0.414 0.586 33 H 0.151 0.849 34 H 0.389 0.611 35 H -0.269 1.269 36 H -0.258 1.258 37 H 0.181 0.819 38 H 0.095 0.905 39 H 0.067 0.933 40 H 0.130 0.870 41 H 0.132 0.868 42 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.204 2.607 -0.406 5.835 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C -0.097 4.097 3 C -0.147 4.147 4 C -0.073 4.073 5 C -0.082 4.082 6 H 0.129 0.871 7 C -0.162 4.162 8 C 0.013 3.987 9 H 0.105 0.895 10 N -0.343 5.343 11 C 0.359 3.641 12 O -0.438 6.438 13 C -0.186 4.186 14 C -0.286 4.286 15 Cl 0.032 6.968 16 S 0.529 5.471 17 C -0.342 4.342 18 C -0.140 4.140 19 O -0.343 6.343 20 Si 0.604 3.396 21 C -0.095 4.095 22 C -0.180 4.180 23 C -0.152 4.152 24 C -0.143 4.143 25 C -0.159 4.159 26 H 0.093 0.907 27 H 0.089 0.911 28 H 0.092 0.908 29 H 0.151 0.849 30 H 0.106 0.894 31 H 0.117 0.883 32 H 0.252 0.748 33 H 0.168 0.832 34 H 0.239 0.761 35 H -0.194 1.194 36 H -0.183 1.183 37 H 0.198 0.802 38 H 0.113 0.887 39 H 0.086 0.914 40 H 0.148 0.852 41 H 0.150 0.850 42 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -4.002 4.185 -0.953 5.868 hybrid contribution -0.384 -1.737 1.432 2.284 sum -4.386 2.448 0.479 5.045 Atomic orbital electron populations 1.20838 0.90112 1.03403 1.02857 1.20231 0.97130 0.93319 0.99055 1.21181 0.93814 0.98139 1.01547 1.19843 0.93548 0.94888 0.99016 1.21579 0.94658 0.95042 0.96959 0.87136 1.23359 0.94750 1.01945 0.96163 1.21833 1.00139 0.79354 0.97417 0.89509 1.45366 1.12662 1.07129 1.69165 1.17688 0.84034 0.85838 0.76537 1.90862 1.27747 1.73860 1.51339 1.20315 0.93873 0.94206 1.10208 1.25810 0.92508 1.02062 1.08175 1.98427 1.15622 1.89944 1.92852 1.83337 1.01322 0.99245 1.63221 1.24874 0.99011 0.99235 1.11088 1.24480 0.97467 1.05105 0.86953 1.86623 1.41763 1.89878 1.16069 0.94507 0.79948 0.74897 0.90280 1.21144 0.96854 0.92368 0.99182 1.23536 0.95710 1.00993 0.97719 1.21191 1.00503 0.92115 1.01359 1.21388 0.94578 0.98757 0.99613 1.21297 0.94684 0.98205 1.01691 0.90659 0.91142 0.90837 0.84880 0.89441 0.88307 0.74795 0.83181 0.76067 1.19448 1.18330 0.80190 0.88665 0.91390 0.85173 0.84987 0.85324 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.23 10.01 71.24 0.71 0.94 16 2 C -0.10 -0.18 5.88 -19.87 -0.12 -0.29 16 3 C -0.13 -0.12 9.36 22.27 0.21 0.09 16 4 C -0.07 -0.03 5.29 -19.87 -0.11 -0.14 16 5 C -0.06 0.21 3.86 -11.01 -0.04 0.17 16 6 H 0.11 -0.68 8.09 -2.39 -0.02 -0.69 16 7 C -0.12 0.47 7.29 31.12 0.23 0.70 16 8 C 0.12 -0.04 4.32 45.52 0.20 0.16 16 9 H 0.09 0.37 7.46 -2.39 -0.02 0.35 16 10 N -0.69 0.67 5.25 -443.65 -2.33 -1.66 16 11 C 0.57 3.28 7.79 86.55 0.67 3.96 16 12 O -0.56 -7.71 14.51 -4.22 -0.06 -7.77 16 13 C -0.17 -0.38 5.98 -19.84 -0.12 -0.50 16 14 C -0.14 -0.51 6.87 67.35 0.46 -0.05 16 15 Cl 0.00 0.02 27.20 -2.72 -0.07 -0.05 16 16 S 0.26 -0.68 20.19 -56.49 -1.14 -1.82 16 17 C -0.22 1.15 5.65 24.52 0.14 1.29 16 18 C -0.03 0.19 2.94 71.24 0.21 0.40 16 19 O -0.53 2.34 12.88 -148.98 -1.92 0.43 16 20 Si 0.70 -4.16 30.92 68.60 2.12 -2.04 16 21 C -0.07 0.29 9.75 22.70 0.22 0.51 16 22 C -0.14 0.15 7.26 31.12 0.23 0.37 16 23 C -0.13 -0.17 8.61 22.27 0.19 0.02 16 24 C -0.13 -0.25 10.05 22.27 0.22 -0.02 16 25 C -0.14 -0.32 9.70 22.27 0.22 -0.11 16 26 H 0.07 -0.22 8.14 -2.39 -0.02 -0.23 16 27 H 0.07 -0.19 8.09 -2.39 -0.02 -0.21 16 28 H 0.07 -0.25 8.08 -2.38 -0.02 -0.27 16 29 H 0.13 -0.35 8.05 -2.91 -0.02 -0.37 16 30 H 0.09 -0.48 8.14 -2.39 -0.02 -0.50 16 31 H 0.10 -0.32 7.72 -2.39 -0.02 -0.34 16 32 H 0.41 -2.91 7.25 -92.72 -0.67 -3.58 16 33 H 0.15 -1.55 7.96 -2.39 -0.02 -1.57 16 34 H 0.39 -3.60 8.70 -74.06 -0.64 -4.24 16 35 H -0.27 -0.22 7.11 99.48 0.71 0.49 16 36 H -0.26 0.58 7.11 99.48 0.71 1.29 16 37 H 0.18 -1.73 7.10 -2.91 -0.02 -1.75 16 38 H 0.09 -0.08 6.31 -2.39 -0.02 -0.10 16 39 H 0.07 0.04 8.14 -2.39 -0.02 0.03 16 40 H 0.13 -0.16 6.66 -2.91 -0.02 -0.18 16 41 H 0.13 -0.15 8.06 -2.91 -0.02 -0.18 16 42 H 0.13 -0.06 8.06 -2.91 -0.02 -0.08 16 Total: 0.00 -17.49 377.79 -0.07 -17.56 By element: Atomic # 1 Polarization: -11.95 SS G_CDS: -0.20 Total: -12.15 kcal Atomic # 6 Polarization: 3.98 SS G_CDS: 3.53 Total: 7.50 kcal Atomic # 7 Polarization: 0.67 SS G_CDS: -2.33 Total: -1.66 kcal Atomic # 8 Polarization: -5.36 SS G_CDS: -1.98 Total: -7.34 kcal Atomic # 14 Polarization: -4.16 SS G_CDS: 2.12 Total: -2.04 kcal Atomic # 16 Polarization: -0.68 SS G_CDS: -1.14 Total: -1.82 kcal Atomic # 17 Polarization: 0.02 SS G_CDS: -0.07 Total: -0.05 kcal Total: -17.49 -0.07 -17.56 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9650858_13431040.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 34.280 kcal (2) G-P(sol) polarization free energy of solvation -17.487 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 16.793 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.073 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.560 kcal (6) G-S(sol) free energy of system = (1) + (5) 16.720 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds