Wall clock time and date at job start Tue Mar 9 2021 12:51:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.38213 * 119.99563 * 2 1 4 4 C 1.38260 * 119.99792 * 179.97438 * 3 2 1 5 5 C 1.50700 * 119.99985 * 180.02562 * 4 3 2 6 6 H 1.08998 * 112.84923 * 348.80090 * 5 4 3 7 7 C 1.53779 * 113.61413 * 120.00634 * 5 4 3 8 8 C 1.53774 * 87.08313 * 139.97980 * 7 5 4 9 9 H 1.08996 * 113.61424 * 219.92915 * 8 7 5 10 10 N 1.46509 * 113.61485 * 89.11300 * 8 7 5 11 11 C 1.34774 * 119.99802 * 156.53095 * 10 8 7 12 12 O 1.21281 * 120.00449 * 359.97438 * 11 10 8 13 13 C 1.50702 * 119.99848 * 180.02562 * 11 10 8 14 14 C 1.53540 * 109.82344 * 79.99601 * 13 11 10 15 15 C 1.53042 * 108.55994 * 180.48693 * 14 13 11 16 16 C 1.50203 * 110.31770 * 310.43133 * 15 14 13 17 17 C 1.50703 * 118.54380 * 200.07417 * 16 15 14 18 18 O 1.42898 * 109.47096 * 69.97432 * 17 16 15 19 19 Si 1.86297 * 109.46990 * 189.97849 * 17 16 15 20 20 C 1.31113 * 122.90900 * 20.04840 * 16 15 14 21 21 N 1.38927 * 121.84612 * 359.85834 * 20 16 15 22 22 C 1.53782 * 87.17424 * 334.52513 * 8 7 5 23 23 C 1.38218 * 120.00068 * 0.27702 * 4 3 2 24 24 C 1.38260 * 119.99639 * 359.51412 * 23 4 3 25 25 C 1.38209 * 120.00273 * 0.43846 * 24 23 4 26 26 H 1.08998 * 109.47180 * 90.00791 * 1 2 3 27 27 H 1.09004 * 109.47431 * 210.00281 * 1 2 3 28 28 H 1.08996 * 109.47955 * 330.00220 * 1 2 3 29 29 H 1.07993 * 120.00407 * 359.97336 * 3 2 1 30 30 H 1.08998 * 113.61604 * 25.42703 * 7 5 4 31 31 H 1.09001 * 113.68553 * 254.53898 * 7 5 4 32 32 H 0.97001 * 119.99650 * 336.52547 * 10 8 7 33 33 H 1.09006 * 109.86456 * 319.09672 * 13 11 10 34 34 H 1.08997 * 109.62136 * 60.76852 * 14 13 11 35 35 H 1.08994 * 109.61922 * 300.20990 * 14 13 11 36 36 H 1.09003 * 109.32645 * 190.16927 * 15 14 13 37 37 H 1.09008 * 109.18792 * 70.60498 * 15 14 13 38 38 H 1.09004 * 109.46773 * 309.97792 * 17 16 15 39 39 H 0.96702 * 113.99866 * 60.00655 * 18 17 16 40 40 H 1.48499 * 109.99765 * 180.02562 * 19 17 16 41 41 H 1.48500 * 110.00015 * 301.31531 * 19 17 16 42 42 H 1.08002 * 119.07306 * 179.56986 * 20 16 15 43 43 H 0.97002 * 120.55587 * 193.05468 * 21 20 16 44 44 H 1.09000 * 113.61633 * 140.02162 * 22 8 7 45 45 H 1.09002 * 113.61117 * 270.92856 * 22 8 7 46 46 H 1.07996 * 120.00030 * 179.72100 * 23 4 3 47 47 H 1.08000 * 119.99648 * 180.27620 * 24 23 4 48 48 H 1.07997 * 120.00340 * 179.84010 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1979 1.1970 0.0000 4 6 3.5805 1.1971 0.0005 5 6 4.3340 2.5022 0.0011 6 1 3.6923 3.3614 -0.1940 7 6 5.2518 2.6831 1.2217 8 6 6.2808 3.2976 0.2583 9 1 7.3076 2.9970 0.4664 10 7 6.1351 4.7456 0.0894 11 6 7.1873 5.4866 -0.3106 12 8 8.2550 4.9549 -0.5305 13 6 7.0376 6.9762 -0.4838 14 6 7.1234 7.6704 0.8830 15 6 6.9560 9.1774 0.6753 16 6 7.8723 9.6588 -0.4132 17 6 8.2103 11.1262 -0.4733 18 8 9.0514 11.4669 0.6305 19 14 9.0998 11.4937 -2.0685 20 6 8.3914 8.8589 -1.3130 21 7 8.1288 7.4947 -1.3198 22 6 5.6127 2.4771 -0.8576 23 6 4.2717 0.0001 -0.0047 24 6 3.5804 -1.1973 -0.0004 25 6 2.1983 -1.1974 0.0001 26 1 -0.3633 -0.0001 -1.0276 27 1 -0.3634 -0.8900 0.5139 28 1 -0.3635 0.8899 0.5138 29 1 1.6580 2.1323 -0.0004 30 1 5.5772 1.7428 1.6665 31 1 4.8671 3.3889 1.9580 32 1 5.2812 5.1709 0.2655 33 1 6.0793 7.2001 -0.9526 34 1 8.0944 7.4690 1.3355 35 1 6.3301 7.3000 1.5321 36 1 7.1931 9.6980 1.6031 37 1 5.9233 9.3882 0.3971 38 1 7.2927 11.7127 -0.4255 39 1 9.8878 10.9821 0.6520 40 1 9.4393 12.9376 -2.1397 41 1 10.3365 10.6766 -2.1603 42 1 9.0377 9.2728 -2.0729 43 1 8.6595 6.8930 -1.8651 44 1 5.5183 3.0169 -1.7998 45 1 6.0367 1.4804 -0.9803 46 1 5.3517 0.0002 -0.0089 47 1 4.1205 -2.1325 0.0001 48 1 1.6584 -2.1326 0.0009 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9650858_15413834.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:51:58 Heat of formation + Delta-G solvation = -0.513054 kcal Electronic energy + Delta-G solvation = -27303.350514 eV Core-core repulsion = 23518.182405 eV Total energy + Delta-G solvation = -3785.168108 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 329.178 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -41.82955 -40.89309 -39.72961 -38.80123 -37.38301 -34.90460 -33.51572 -33.24044 -32.89083 -31.79455 -27.98894 -27.66686 -26.82251 -26.11068 -25.37944 -23.77074 -23.10557 -22.29275 -21.79967 -19.98134 -19.46691 -19.09387 -18.18458 -17.69362 -17.28221 -16.81173 -16.59203 -16.27441 -16.22280 -15.90039 -15.62829 -15.31233 -15.23748 -15.06861 -14.81159 -14.62392 -14.34737 -14.21879 -14.03597 -13.89617 -13.76317 -13.56778 -13.15295 -13.14388 -12.91679 -12.82418 -12.75356 -12.24906 -12.23213 -11.99360 -11.79769 -11.74888 -11.62613 -11.27722 -11.25587 -10.87847 -10.28084 -10.20838 -9.70325 -9.47634 -8.49954 -4.89579 0.39697 0.46627 1.31342 1.40246 1.45390 1.62547 1.77736 2.05256 2.57228 2.75831 3.32455 3.41286 3.55359 3.57796 3.61879 3.68806 3.81027 3.81634 3.92589 3.96286 3.99111 4.06671 4.19283 4.25022 4.34256 4.41259 4.46498 4.53690 4.54250 4.61986 4.63249 4.67626 4.68407 4.71236 4.75171 4.82912 4.88613 4.92370 4.99467 5.01642 5.13053 5.14174 5.22134 5.25729 5.41871 5.53909 5.55892 5.66882 5.70243 6.09023 6.17121 6.34456 6.60036 6.79075 7.02794 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.084 4.084 3 C -0.117 4.117 4 C -0.069 4.069 5 C -0.072 4.072 6 H 0.097 0.903 7 C -0.134 4.134 8 C 0.119 3.881 9 H 0.105 0.895 10 N -0.708 5.708 11 C 0.515 3.485 12 O -0.528 6.528 13 C 0.136 3.864 14 C -0.126 4.126 15 C -0.054 4.054 16 C -0.276 4.276 17 C -0.050 4.050 18 O -0.536 6.536 19 Si 0.667 3.333 20 C 0.138 3.862 21 N -0.731 5.731 22 C -0.143 4.143 23 C -0.123 4.123 24 C -0.113 4.113 25 C -0.125 4.125 26 H 0.071 0.929 27 H 0.067 0.933 28 H 0.066 0.934 29 H 0.120 0.880 30 H 0.099 0.901 31 H 0.077 0.923 32 H 0.403 0.597 33 H 0.093 0.907 34 H 0.075 0.925 35 H 0.079 0.921 36 H 0.078 0.922 37 H 0.068 0.932 38 H 0.109 0.891 39 H 0.372 0.628 40 H -0.261 1.261 41 H -0.264 1.264 42 H 0.135 0.865 43 H 0.409 0.591 44 H 0.074 0.926 45 H 0.096 0.904 46 H 0.122 0.878 47 H 0.122 0.878 48 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.096 -1.819 -0.852 5.478 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.084 4.084 3 C -0.135 4.135 4 C -0.069 4.069 5 C -0.091 4.091 6 H 0.115 0.885 7 C -0.172 4.172 8 C 0.013 3.987 9 H 0.123 0.877 10 N -0.360 5.360 11 C 0.301 3.699 12 O -0.404 6.404 13 C 0.027 3.973 14 C -0.165 4.165 15 C -0.091 4.091 16 C -0.286 4.286 17 C -0.161 4.161 18 O -0.342 6.342 19 Si 0.570 3.430 20 C 0.018 3.982 21 N -0.364 5.364 22 C -0.181 4.181 23 C -0.141 4.141 24 C -0.131 4.131 25 C -0.143 4.143 26 H 0.090 0.910 27 H 0.086 0.914 28 H 0.085 0.915 29 H 0.138 0.862 30 H 0.117 0.883 31 H 0.096 0.904 32 H 0.238 0.762 33 H 0.110 0.890 34 H 0.093 0.907 35 H 0.097 0.903 36 H 0.096 0.904 37 H 0.086 0.914 38 H 0.126 0.874 39 H 0.220 0.780 40 H -0.186 1.186 41 H -0.190 1.190 42 H 0.152 0.848 43 H 0.246 0.754 44 H 0.093 0.907 45 H 0.114 0.886 46 H 0.140 0.860 47 H 0.140 0.860 48 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -4.184 -1.531 -1.184 4.610 hybrid contribution 0.476 -0.425 0.764 0.995 sum -3.708 -1.956 -0.420 4.214 Atomic orbital electron populations 1.20819 0.91104 1.02934 1.02500 1.19954 0.96172 0.93163 0.99074 1.20929 0.93493 0.97585 1.01503 1.19644 0.93396 0.94324 0.99499 1.21630 0.94991 0.95298 0.97154 0.88493 1.23409 0.95599 1.01966 0.96261 1.21881 1.00697 0.79430 0.96672 0.87726 1.45613 1.13693 1.07485 1.69195 1.20630 0.83966 0.88914 0.76423 1.90742 1.26793 1.73410 1.49416 1.20981 0.92644 0.89700 0.93978 1.21870 1.03546 0.96694 0.94414 1.19971 0.98170 0.93235 0.97760 1.20900 1.10560 0.95814 1.01305 1.24670 0.98525 0.94360 0.98541 1.86570 1.33000 1.67331 1.47337 0.95427 0.84265 0.80397 0.82947 1.20507 0.97758 0.83596 0.96362 1.44262 1.37065 1.05330 1.49694 1.23607 0.95307 1.01194 0.98028 1.20989 0.99873 0.91947 1.01300 1.21153 0.94335 0.98072 0.99528 1.21078 0.94354 0.97620 1.01218 0.91041 0.91428 0.91470 0.86207 0.88269 0.90408 0.76182 0.88991 0.90654 0.90273 0.90377 0.91366 0.87350 0.78023 1.18609 1.19023 0.84847 0.75413 0.90698 0.88568 0.86033 0.85983 0.86119 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.14 10.01 36.00 0.36 0.50 16 2 C -0.08 -0.04 5.88 -104.62 -0.62 -0.66 16 3 C -0.12 -0.02 9.37 -39.58 -0.37 -0.39 16 4 C -0.07 0.01 5.29 -104.62 -0.55 -0.54 16 5 C -0.07 0.15 3.87 -90.82 -0.35 -0.20 16 6 H 0.10 -0.29 8.09 -51.93 -0.42 -0.71 16 7 C -0.13 0.34 7.29 -25.92 -0.19 0.15 16 8 C 0.12 -0.17 4.30 -67.12 -0.29 -0.46 16 9 H 0.10 0.04 7.50 -51.93 -0.39 -0.35 16 10 N -0.71 1.55 5.26 -53.02 -0.28 1.27 16 11 C 0.52 0.14 7.09 -10.99 -0.08 0.06 16 12 O -0.53 -2.27 15.69 5.56 0.09 -2.19 16 13 C 0.14 -0.17 3.35 -68.57 -0.23 -0.40 16 14 C -0.13 0.16 5.48 -26.43 -0.14 0.02 16 15 C -0.05 0.04 5.85 -28.10 -0.16 -0.13 16 16 C -0.28 0.04 5.37 -101.34 -0.54 -0.50 16 17 C -0.05 -0.01 2.81 36.01 0.10 0.09 16 18 O -0.54 -1.10 12.88 -35.23 -0.45 -1.55 16 19 Si 0.67 -0.27 29.95 -169.99 -5.09 -5.36 16 20 C 0.14 -0.05 9.62 -16.08 -0.15 -0.20 16 21 N -0.73 0.09 5.47 -55.41 -0.30 -0.22 16 22 C -0.14 0.22 7.27 -25.77 -0.19 0.03 16 23 C -0.12 0.00 8.63 -39.58 -0.34 -0.35 16 24 C -0.11 -0.04 10.05 -39.58 -0.40 -0.44 16 25 C -0.12 -0.07 9.70 -39.58 -0.38 -0.46 16 26 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 27 H 0.07 -0.11 8.09 -51.93 -0.42 -0.53 16 28 H 0.07 -0.12 8.09 -51.93 -0.42 -0.54 16 29 H 0.12 -0.15 8.05 -52.49 -0.42 -0.58 16 30 H 0.10 -0.22 7.73 -51.93 -0.40 -0.62 16 31 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 32 H 0.40 -1.90 8.70 -40.82 -0.36 -2.26 16 33 H 0.09 -0.27 8.14 -51.93 -0.42 -0.69 16 34 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 35 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 36 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 37 H 0.07 -0.12 8.14 -51.92 -0.42 -0.54 16 38 H 0.11 -0.03 7.96 -51.93 -0.41 -0.44 16 39 H 0.37 -0.18 8.70 45.56 0.40 0.21 16 40 H -0.26 -0.85 7.11 56.52 0.40 -0.45 16 41 H -0.26 -0.41 6.84 56.52 0.39 -0.02 16 42 H 0.13 -0.18 4.30 -52.49 -0.23 -0.41 16 43 H 0.41 0.10 8.09 -40.82 -0.33 -0.23 16 44 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 45 H 0.10 -0.14 6.30 -51.93 -0.33 -0.47 16 46 H 0.12 -0.16 6.64 -52.49 -0.35 -0.51 16 47 H 0.12 -0.14 8.06 -52.49 -0.42 -0.57 16 48 H 0.12 -0.09 8.06 -52.49 -0.42 -0.52 16 LS Contribution 383.92 15.07 5.79 5.79 Total: 0.00 -7.17 383.92 -12.31 -19.47 By element: Atomic # 1 Polarization: -5.80 SS G_CDS: -7.52 Total: -13.32 kcal Atomic # 6 Polarization: 0.64 SS G_CDS: -4.53 Total: -3.89 kcal Atomic # 7 Polarization: 1.63 SS G_CDS: -0.58 Total: 1.05 kcal Atomic # 8 Polarization: -3.37 SS G_CDS: -0.37 Total: -3.74 kcal Atomic # 14 Polarization: -0.27 SS G_CDS: -5.09 Total: -5.36 kcal Total LS contribution 5.79 Total: 5.79 kcal Total: -7.17 -12.31 -19.47 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9650858_15413834.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 18.961 kcal (2) G-P(sol) polarization free energy of solvation -7.168 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 11.793 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.306 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.474 kcal (6) G-S(sol) free energy of system = (1) + (5) -0.513 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds